GenomeNet

Database: Pfam
Entry: CBM_17_28
LinkDB: CBM_17_28
Original site: CBM_17_28 
#=GF ID   CBM_17_28
#=GF AC   PF03424.18
#=GF DE   Carbohydrate binding domain (family 17/28)
#=GF PI   CBM_28;
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   CAZY
#=GF GA   25.00 25.00;
#=GF TC   25.10 30.40;
#=GF NC   23.10 19.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF WK   Carbohydrate-binding_module
#=GF CL   CL0202
#=GF DR   INTERPRO; IPR005086;
#=GF DR   CAZY; CBM17;
#=GF DR   CAZY; CBM28;
#=GF DR   SCOP; 1g0c; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF SQ   36
#=GS A0A7Z2VJU8_9BACL/377-596  AC A0A7Z2VJU8.1
#=GS E4Q408_CALOW/352-395      AC E4Q408.1
#=GS L0A1E9_DEIPD/25-227       AC L0A1E9.1
#=GS Q8RCQ7_CALS4/348-380      AC Q8RCQ7.1
#=GS A0A511N037_DEIC1/374-577  AC A0A511N037.1
#=GS E6U1W6_EVAC2/388-584      AC E6U1W6.1
#=GS A0A2K9EQ23_9FIRM/255-453  AC A0A2K9EQ23.1
#=GS A0A318S3Q8_9DEIO/3-160    AC A0A318S3Q8.1
#=GS D9ST59_CLOC7/356-557      AC D9ST59.1
#=GS A0A516KLH8_9BACI/342-545  AC A0A516KLH8.1
#=GS A0A8J4H5C4_9BACL/376-575  AC A0A8J4H5C4.1
#=GS S0FFR1_RUMCE/353-557      AC S0FFR1.1
#=GS E6U1W5_EVAC2/400-604      AC E6U1W5.1
#=GS A0A1V4SNY5_RUMHU/353-561  AC A0A1V4SNY5.1
#=GS A0A6V8M164_9BACL/368-572  AC A0A6V8M164.1
#=GS A0A4Y8Q357_9BACL/407-610  AC A0A4Y8Q357.1
#=GS A0A433Y6S6_9BACL/363-563  AC A0A433Y6S6.1
#=GS W4Q6Q7_9BACI/551-751      AC W4Q6Q7.1
#=GS A0A2M8TCA1_9CLOT/348-558  AC A0A2M8TCA1.1
#=GS A0A1I6ID35_9FIRM/346-556  AC A0A1I6ID35.1
#=GS A0A0C7P2G3_DEFTU/355-553  AC A0A0C7P2G3.1
#=GS B8I5Z4_RUMCH/353-557      AC B8I5Z4.1
#=GS A0A1W1VGZ4_9DEIO/383-585  AC A0A1W1VGZ4.1
#=GS A0A231RAL6_9BACL/406-609  AC A0A231RAL6.1
#=GS A0A385NUF1_9BACI/353-556  AC A0A385NUF1.1
#=GS A0A6S6QS68_9FIRM/347-557  AC A0A6S6QS68.1
#=GS D9SWQ0_CLOC7/346-556      AC D9SWQ0.1
#=GS A0A2Z2KBI0_9BACL/350-560  AC A0A2Z2KBI0.1
#=GS A0A841T9H6_9BACL/341-547  AC A0A841T9H6.1
#=GS W4R0M6_ALKA3/371-570      AC W4R0M6.1
#=GS A0A1M7QQ08_9BACI/357-556  AC A0A1M7QQ08.1
#=GS A0A078KMD3_9FIRM/354-555  AC A0A078KMD3.1
#=GS A0A1H0L774_9BACI/349-551  AC A0A1H0L774.1
#=GS A0A1M7BPG5_9FIRM/347-557  AC A0A1M7BPG5.1
#=GS A0A494XE53_9BACL/380-583  AC A0A494XE53.1
#=GS A0A1I0EIY9_9CLOT/25-207   AC A0A1I0EIY9.1
A0A7Z2VJU8_9BACL/377-596             ......k-WDVSELSISGEYVRARIKGIAY.EPKERVVAEQtivnaplgVPTLPSNFEDSTLQGWGWDGASGVK..gALTIEEANGSKAVAWEVA..YPEVK..PTDGWASApRIMLAGI.NATrgTNRYLIFDLFLKPVRAS.EGKLSINlAMAPPSLGYWAQASDNYDISLAKLGerpKTADGLYRIEVSFDMNKINENKSIEAE..TVLRDLTIVVADVDSDY.A...GTMYLDNVRF-a..............
E4Q408_CALOW/352-395                 .......MWDIKELSISGEYVRARIKGVTY.EPVRRD----........-------------------------...------------------..-----..--------.-------.---..-----------------.-------.-------------------------...---------------------------..-----------------.-...-----------igmkcpfkdvsedni
L0A1E9_DEIPD/25-227                  krlstta-------VVSGEYVRARIKGVPY.RPIDRTA---........YAELAWSFEND-TQGFGVNSDSPDK...TVTVTHDRGALKLSSLGA..SNDVS..TGGFWSNL.RISADGS.SVK..PNILGAKSISMDVFVPA.PTTVSIA.AVPQSSNNGWTSPARAVVLTADQFT...LQPDQRYKATLILTDADAPNLQKIAED..ETNNVLSNIIFFVGTAS.TasnDTVWLDNITF-h..............
Q8RCQ7_CALS4/348-380                 ......a-WAVNQLSLSGEYVRARIKGIPY.KPISREAR--........-------------------------...------------------..-----..--------.-------.---..-----------------.-------.-------------------------...---------------------------..-----------------.-...-----------gk.............
A0A511N037_DEIC1/374-577             .......LWTPSELTLSGEYVRARIKGTKY.QPIDRTA---........FTEVAFNFDNDTTQGFALNPDSGVK...GITVSAENKMLKLSPLSG..SNDVS..AGNFWANA.RFSADGT.SQH..PNLRGAKSMSMDVYVPA.PTKVSVA.AVPQSSKDGWTNPARAVIVNADQFV...KQADGKYKATVTLSDEDAPNLKLIAED..ETDNVLSNLILFIGTES.QeanDTVWIDNITFS...............
E6U1W6_EVAC2/388-584                 .......VWTKEQLSLSGEYVRSRIIGEEY.EPIDRTPRET........FTEVIWDFNDGTTQGFGVNAGSTLE...GFTVTNENNALQIAGISE..ANSV-..----W-DV.RISADNW.DET..VDIAGAQELSMEIIVDE.PTMVEIG.AIPQSASAGWANPVE-VAVSPEDFD...LQEDGNYMAVLTLTAEDAPNLSNIANS..SEDSLLNNIILLINTED.A...DAISLDNISVS...............
A0A2K9EQ23_9FIRM/255-453             .......VWAVEELSLSGEYIRSRIKGIEY.EPIDRTI---........FTKVIWDFDDETTQGFVLNADSPIE...-VELSNEENALKISGLGE..SNDVS..DGNFWANA.RISADEW.GGA..VDILGGEEISFDIMLDS.PSTVSIA.AVLQGPAADWANPARAIQVTEDDFE...EF-EGTYKATLVISTEDAPSFEAIAMD..PDDNTLTNIILFIGAEN.T...DTIYLDNITVS...............
A0A318S3Q8_9DEIO/3-160               .....rn-----------------------.----------........-----------------VNADSPLK...SVTLSNDAGTLRVGGLTP..STDVS..ESGYWSNV.RLSADSS.TQR..PGLSGTTSLSLDVLVGA.PTTISIA.ALPQSATHGWINPQRAVRATPDQFV...RQPNGLYKATVTITAADTPNLAAIAADinAAGRTLTNLILFVGAQN.G...ADVRLDNITFS...............
D9ST59_CLOC7/356-557                 .......LWSPNEISPAGEYYRARIKGITY.NPIDRKKVD-........FTTNLFDFDDDTTQGFGINRDSFVK...SVMLSNENKALKLNGLSA..SNDIS..DYNFWGNA.RLSAEAS.GLY..KDIKDAENLTMDVITAT.PATVSIA.VVPQSYYHSWIDPKNAVQVVPEDFK...LQQDGSYKATLTISSEDSPNLKAIASD..SKDSILTDIVLIVGSTT.-...SAISIDNIAVS...............
A0A516KLH8_9BACI/342-545             .......VWAVDELSVSGEYVRARIKGIPY.EPIDRTERED........FTETIWNFDDGTLQGFGVNADSPIQ...DVVVSNVDGKLHIDPKGA..SNDLS..DGNYWANM.RLSADGT.TVR..PDLFGAEELRMDVYADQ.PTTVSIA.AIPQSADHGWANPLNAVQVVPEDFK...VQEDGTYKATLTITKADAPNLEAIAKD..ANDSILTNIVLFVGTEN.G...GPVSIDNIAVS...............
A0A8J4H5C4_9BACL/376-575             .......VWVIEELSASGEYMRARIKGIPY.RPIDRNA---........FSEVIWDFNDGTTQGFGVNSDSPVK...DLTIENENDMLKISGMSA..SNAMG..DGDFWSNV.RISSDGY.NPE..ANILGAKEISIDVTVEE.PTAVGIA.AIPQNQ-GSWVNPVKQSKIAADDFV...EQDDGTYKAVLTITAEDSPAIQAIGEN..IDGHILNNLILFVAAED.V...DVIYLDNITFS...............
S0FFR1_RUMCE/353-557                 .......VWDIKELSVSGEYARARIKGIPY.TPIDRTVRED........FTINIWDFNDGTTQGFDVNGDSPVK...DITVSNENNSLKIEGINA..SKDVS..EGNYWANL.RLSADGS.SAR..PDILGAQKLTMDVIVTS.PSAVSIA.AIPQSAGHSWANPKRAVVVTPGAFE...LQADNTYKALVTITGEDSPNLEAIAND..SSDSIMTNIILFVGTST.T..sNAIYLDNIGVS...............
E6U1W5_EVAC2/400-604                 .......VWSMEELSVSGEYVRSRILGEEY.QPIDRTPREE........FSEVIWDFNDGTTQGFVQNSDSPVD...-VTIENVNDALQITGLDE..SNAIAgeEEDYWSNV.RISADEW.EET..FDILGAEELSMDVVVDD.PTTVAIA.AIPQSSAHEWANASNSVLITEDDFE...EQEDGTYKALLTITGEDAPNLTNIAED..PEGSELNNIILFVGTEN.A...DVISLDNITVT...............
A0A1V4SNY5_RUMHU/353-561             .......LWDIKELSVSGEYARARIKGISY.VPVDRTVRAD........FTTNIWDFNDGTAQGFGVNGDSPANtvtAVTVSNENNSLKIDGISA..STDLS..EGNYWANV.RLSADGT.SAR..PDIFGADKLTMDVIVNTsPASVAIA.AIPQSSKHGWANPTRAITVTPGAFE...LQADNTYKAVLTITRADSPNFEAIAAD..STDSILTNIILFVGAVTdS...SSIYLDNISVS...............
A0A6V8M164_9BACL/368-572             .......LWEPRELSLSGEYVRARIKGIPY.EPIDRTVRES........FHTIIWNFDDGTEQGFGVNGDSPVK...MITLSNVNNGLQITGLGS..GNDLS..ATSFWGNP.RISADGT.AIR..PNVLGAEKLTMDVIAPS.QTTVAIA.AVPQSSSAGWANPNRAVQVTPEQFE...LQEDGSYRATLTITADDAPNLKTIASH..ETDNVLTNIILFIGTAS.G..tDQIILDNIAVS...............
A0A4Y8Q357_9BACL/407-610             .......LWTPQELTVSGEYVRARIKGIAY.EPIDRTK-ES........FSTTLFDFNDGTVQGFGLNADSPVK...SITLSNVNNELQLSGMTG..SQDVS..DGNYWANV.RLSVDNWaGDK..PDILGAEQLTMDVFAAA.PTTVAVA.AIPQSANHGWTNPQQAVRAETGDFT...LQEDGRYKATITISKADAPNLAAIAED..AEDSTLTNLILFVGVAS.G...NVISLDNIAIS...............
A0A433Y6S6_9BACL/363-563             .......VWSLPELSVSGEYVRARIKGIPY.EPIDRNK---........YSQVLWDFNDGTTQGFGVNGDSPNK..eSITLSNADNALQITGLNI..SNDTS..EGNYWANI.RLSADAW.GKS..ANILGVEQLSMDVIVDA.KTTVSIA.AIPQGPSAGWANPTRAIQVTETDFV...PYGD-KFIATLTITTDDSPSLETIAMH..TDNNIMTNLILFVGTED.A...NVISLDNVTVT...............
W4Q6Q7_9BACI/551-751                 .......VWAPEELSLSGEYVRARIKGIEY.TPIDRTK---........FTKLVWDFNDGTTQGFQVNGDSPNK..eSITLSNNNDALQIEGLNV..SNDIS..EGNYWDNV.RLSADGW.SEN..VDILGATELTIDVIVEE.PTTVSIA.AIPQGPAAGWANPTRAIKVTEDDFE...SFGDG-YKALVTITSEDSPSLETIATS..PEDNTMSNIILFVGTED.A...DVISLDNITVS...............
A0A2M8TCA1_9CLOT/348-558             ......a-WSDSELTDSGKYIRARIKGISYnVPDDNTKSVTta...pkdFSSGYWDFNDGTTQGFGINKDSPIT...NIDFKNSNNALELINLNSkgSNDVS..EGNFWANA.RLSADLL.NTT..IDISGDTKLTMDVTAPS.PTNVSIA.AIPQSSSVGWGNPTRAKCVHSYDFV...KQADGTYKATITITTDDSPSFKKIATS..TSDSLVSNMILFVGSTS.-...DTIYLDNMKFS...............
A0A1I6ID35_9FIRM/346-556             .......VWSESELTTSGQYVRARIKGIYYaTPEDPSTSEPta...pidFSSGYWDFNDGTTQGFGINADSPIT...AVTVANENNALRITGLNTkgSNDLS..ENNYWANV.RLSADIW.GQS..INIYGDTKLTMDIIAPS.PANVSIA.AIPQSSSHGWANPTRAIRVWTGNFT...AQSDGTYKATLTISTADSPNFSTIAAD..ASDSTVTNMILFVGSDS.-...DDISLDNIKF-i..............
A0A0C7P2G3_DEFTU/355-553             .......IWDPYELSVSGEYVRARIKGISY.QPVDRGK---........--SIIWDFNDGTTQGFVVNSDSPIK...DLVLQNEKKRLKISGLDS..SNDVS..EGNFWANA.RISADNT.AVR..KDILGCEELKIDVFVTE.PTTVAIA.AVPQSATHGWANPNCAVKLTEIDFV...KQEDGLYKATLSITTEDAPNLGVIATD..PNDSTLTNIILFIGTDN.A...DTIFLDNIAI-f..............
B8I5Z4_RUMCH/353-557                 .......VWSPKELSVSGEYARARIKGIKY.EPIDRAEKEE........FTTNVWDFNDGTTQGFGINGDSPVKa.dSITIANEKNTLKITGLNT..SKDLT..EGNYWANV.RLSADGT.SNK..PNILGAEKLTMDIITAA.PATVSIA.AIPQNSTHGWANPTRAIAVKPADFV...KQEDGTYKAVLTITPADSPNFDSIAKD..SKDSTMTNIILFVGADT.-...NVISLDNITVS...............
A0A1W1VGZ4_9DEIO/383-585             ......e-WAPQELTVSGEYVRARIQGSAY.RPFDRTA---........FRETAWNFDDGTTQGFVVNGDSPVK...TVTLSNSGGALRIGGLGG..STDVS..AGNYWANV.RLSADGS.SQH..PSLAGAKAMGLDVLVPA.PTTVSIA.AIPQSAAHGWANPKNAVQLKPDQFV...RQADGMYKATLTLSTADSPNFADIAADadAKGSTLTNLILFVGSQN.G...GDVLLDNITFS...............
A0A231RAL6_9BACL/406-609             .......LWSIPELSVSGEYVRARIKGIPY.EPIDRTPREE........FSTVVWDFDDGTAQGFDLNGESPVK...SVDVAVENGRLKLSGMEA..SSDVS..ETNYWGNV.RLSANGS.AAR..PDILGAQRLTLDVFAPA.PTTVAIA.AIPQSASHSWLNPTRAVAANPADFE...EQDDGTYKATITITKDDAPNLGVIGED..GADSVMTNLILIIGAED.A...EWVALDNVTVS...............
A0A385NUF1_9BACI/353-556             .......VWAANELSVSGEYVRARIKGISY.QPIDRTEREE........FTTNVWDFNDGTTQGLGINGGSPIQ...DVTVNNVNNTLELGNLQA..STDVS..EGNYWANV.RISADSS.TAR..PDIYGAEKLTMDVIVDQ.PTTVSIA.AIPQSASVGWANPTRAIQVTEDDFV...LQQDGKYKSVLSISKADSPTLEQIATS..LEDSTLTNVILFVGSAN.G...GKVSLDNISVT...............
A0A6S6QS68_9FIRM/347-557             .......VWTDAELTKSGQYVRARIKGVYYaTPDEPEPNKPqp...pldFSSGFWDFNDGTTQGFGINADSPIT...SIMIQNANNALELSGLNThgSNDLS..EGNFWANA.RLSADVW.GHS..INVYGFTKLTMDVISPS.PTNVSIA.AIPQSNSCGWANPTRAVRVFKNNFV...AQSDGTYKATLTISVDDSPNFKAIAAD..STDSIVRNMILFIGSSS.-...DNLSLDNIKFT...............
D9SWQ0_CLOC7/346-556                 .......LWADNELTTSGQYVRARIKGAYYaTPVDPVTNQPta...pkdFSSGFWDFNDGTTQGFGVNPDSPIT...AINVENANNALKISNLNSkgSNDLS..EGNFWANV.RISADIW.GQS..INIYGDTKLTMDVIAPT.PVNVSIA.AIPQSSTHGWGNPTRAIRVWTNNFV...AQTDGTYKATLTISTNDSPNFNTIATD..AADSVVTNMILFVGSNS.-...DNISLDNIKFT...............
A0A2Z2KBI0_9BACL/350-560             .......VWSENELTKSGQYVRARIKGLDYaTPEEPQPNKPtp...pldFSSGFWDFNDGTTQGFGINADSPIT...AVQIENVNKALQLRGLKTsgSIDLS..EGNFWANA.RLSADVW.GYS..INIYGHTKLTMDVISPT.PTNVSIA.AIPQSNSHGWENPTRAVRVSTNQFV...AQPGGTYKATLTISFNDSPNFKIIATD..SSDSIVRNLLLFVGSSS.-...DNVSLDNIKF-v..............
A0A841T9H6_9BACL/341-547             .......VWAADELSVSGEYIRARIKGIPY.EPIDRTERED........FQTVVWDFNDGTTQGFGINGDSPVKednGIEVQNVNNALQVSGLSV..SRNVY..GDGFWGNL.RLSADGA.SAR..PDMLGAQQLTMDVIAAE.PASVAIA.AIPQSASAGWANPTRAVTLTPDDFA...QREDGAFQATLTITRADSPNLEAIAAN..ADDSTMTNLILFLGADP.A...EAISIDNITVS...............
W4R0M6_ALKA3/371-570                 .......VWVPEELSLSGEYVRARIKGVNY.EPIDRTK---........YTKVLWDFNDGTKQGFGVNGDSPVE...DVVIENEAGALKLSGLDA..SNDVS..EGNYWANA.RLSADGW.GKS..VDILGAEKLTMDVIVDE.PTTVSIA.AIPQGPSANWVNPNRAIKVEPTNFV...PLGD-KFKAELTITSADSPSLEAIAMH..AENNNINNIILFVGTEG.A...DVIYLDNIKV-i..............
A0A1M7QQ08_9BACI/357-556             ......k-WATEELSVSGEYIRARIKGIPY.EPIDRDA---........YSLSVWDFDDGTTGGFGVNGDSPIQ...DINVSNENGALRIEGLDE..SNDTS..EGNFWANA.RLSADSW.GDS..VNILGAETLTMDVIVDE.PATVSIA.AIPQGPAASWVNPNRAVQVSEDDFV...ADGD-RFKASLTITKEDAPALETIATN..EADNTMNNIILFVGTEN.A...NVIYLDNIAVS...............
A0A078KMD3_9FIRM/354-555             .......LWTVEELTVSGEYVRARIKGIEY.QPIDRTKKS-........FSENVWDFDDGTLQGFNINGDSPVK...SVALSNVSGALQLTGLSA..SSDTS..ESGFWGNV.RISADTT.TKS..ADIKGANSISIDVIADA.PATVAIA.AVPQSKSAGWANPARAVSVTPADFA...IQADGKYKATLKISDTDAPNLKNIAED..ASDNTLTNLILFIGSDS.-...DTISLDNITFS...............
A0A1H0L774_9BACI/349-551             .......VWAPEELSLSGEYVRSRIKGIPY.EPIDRTLREP........FTEVLFDFEDS-TQGFVVNADSPVQ...DVTLSHVNHMLEIDGLEA..SSDVS..EGNYWANL.RISADEA.GLA..ADIAGAEELNIQLVAEA.PDTVAIA.AIPQSQSTGWINPDASVIVSEADFT...ERSDGLYEAELTIDTAAAPALSAISTH..QDDTVMTNVVLFVGTAS.A...DTLYIDQISVS...............
A0A1M7BPG5_9FIRM/347-557             .......VWSESELTLSGQYARARIKGLYYaTPEDPKPIKPqp...pldFSSGFWDFNDGTTQGFGINADSPIT...AIMIQNANNALELRGLNTygSNDLS..EGNFWANA.RLSADVW.GQS..INIYGDTKLTMDVIAPS.PTNVSIA.AIPQSTSHGWANPARAVRVSANNFT...AQSDGTYKAALTISLDDSPNFKTIAAD..SNDSTVRNMILFVGSSS.-...DNISLDNIKFT...............
A0A494XE53_9BACL/380-583             ......k-WDIPELSVSGEYVRSRIKGITY.EPIDRTAREP........FSTVVWDFNDGTAQGFGLNADNPVM...GIKVSNADKALKLAGMSG..SHDVS..ADNYWANV.RISADDS.NAR..PNILGADKLTMDIIAAK.PTNVSIA.AIPQNATYGWANPTNAVKVQASDFA...VQENGTYKANLTIAKKDSPNLKAIAED..ADHSVLSNIVLFVGAEG.A...DWISLDNITVS...............
A0A1I0EIY9_9CLOT/25-207              ..agaet-----------------------.---DDGTKEN........FSEVIWDFDDGTTQGFDVNADSPVK...NVTLSNDNNSLKIEGLSA..SNDIS..EGNYWANL.RISADGW.KKT..QDILGAETLTMDVIAAA.PATVSIA.AVPQSPASMWANPRRAVIVRESDFT...QQSDGTYKALLTINTDDAPNFNAIAED..ADDSKMISIILFIGTKD.A...DVIYLDNITV-n..............
#=GC seq_cons                        .......lWs.pELSlSGEYVRARIKGIsY.pPIDRst.t.........FopslWDFsDGTTQGFGlNuDSPlc...slslsNtNsuLclsGLss..SsDlS..-GNaWANs.RlSADsh.utp..ssIhGApcLoMDVlsss.PooVSIA.AIPQSsstGWuNPsRAVpVssssFs...hQsDGpYKAsLTIossDuPNlpsIApD..ssDosloNlILFVGops.s...-sI.LDNIsho...............
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