#=GF ID   CagS
#=GF AC   PF16707.9
#=GF DE   Cag pathogenicity island protein S of Helicobacter pylori
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   pdb_2g3v
#=GF GA   27.00 27.00;
#=GF TC   31.10 447.50;
#=GF NC   25.30 24.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   17623849
#=GF RT   The crystal structure of CagS from the Helicobacter pylori
#=GF RT   pathogenicity island.
#=GF RA   Cendron L, Tasca E, Seraglio T, Seydel A, Angelini A,
#=GF RA   Battistutta R, Montecucco C, Zanotti G;
#=GF RL   Proteins. 2007;69:440-443.
#=GF DR   INTERPRO; IPR032020;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   CagS is a family of proteins from the pathogenicity island of
#=GF CC   Helicobacter pylori. The gene lies just downstream of the
#=GF CC   cluster whose protein-products resemble those of the Vibrio
#=GF CC   proteins that form the structural core of T4SS. The exact
#=GF CC   function of CagS is not known [1].
#=GF SQ   1
#=GS CAGS_HELPY/1-196  AC P97227.2
CAGS_HELPY/1-196             MSNNMRKLFSMIADSKDKKEKLIESLQENELLSTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRDLLMKFDLEKYMKEKGV
#=GC seq_cons                MSNNMRKLFSMIADSKDKKEKLIESLQENELLSTDEKKKIIDQIKTMHDFFKQMHTNKGALDKVLRNYMKDYRAVIKSIGVDKFKKVYRLLESETMELLHAIAENPNFLFSKFDRSILGIFLPFFSKPIMFKMSIREMDSQIELYGTKLPLLKLFVMTDEEMNFYANLKTIEQYNDYVRDLLMKFDLEKYMKEKGV
//