#=GF ID   Cas_Csx9
#=GF AC   PF09658.14
#=GF DE   CRISPR-associated protein (Cas_Csx9)
#=GF AU   TIGRFAMs;
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF SE   TIGRFAMs
#=GF GA   25.00 25.00;
#=GF TC   151.50 150.90;
#=GF NC   20.70 18.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR013488;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Clusters of short DNA repeats with nonhomologous spacers, which
#=GF CC   are found at regular intervals in the genomes of
#=GF CC   phylogenetically distinct prokaryotic species, comprise a family
#=GF CC   with recognisable features. This family is known as CRISPR
#=GF CC   (short for Clustered, Regularly Interspaced Short Palindromic
#=GF CC   Repeats). A number of protein families appear only in
#=GF CC   association with these repeats and are designated Cas
#=GF CC   (CRISPR-Associated) proteins. This entry describes archaeal
#=GF CC   proteins encoded in cas gene regions.
#=GF SQ   2
#=GS Q5JGB3_THEKO/23-399      AC Q5JGB3.1
#=GS A0A7L9FIH2_9CREN/33-399  AC A0A7L9FIH2.1
Q5JGB3_THEKO/23-399                 ............................................MSWVVMDAGIEPDEEELADTLEGALKSLGSRVKIHTSKMGRNDRSSFDKVLKAWFGR.SAPETYGELFELVVTETIKLLRDGNIDPGESLSTIKTDKNGTYLGIAYNGEQAILPAIIKQPEYYERQSGFLSPTTGQKAQIRMDPLWFSFMALGFFTSFAGFIGGKYYLMTKPGI....E..VFWPYEVEEIIEKGILPLTGAGASGRISLSTEELYEMKLAMKLAEEGRDVIEEVYPVTLHLISLEGQVYTELKTTQLNLTGLSEYMEEYVNRIESASMGGLPILVELKAGNATIQKYPLWALVDIAERELWKGVNGDGEMLAYIFVKDLYRAINSGRRELIRDAVFRLFRQGRALLEGSGRASGEFRKVMKTFMWQEHLEVLL.......................
A0A7L9FIH2_9CREN/33-399             dpsvdqrvadifeyvvkelerdkeylassevaghfkshyfagdr------------------------------------------------GVLLRWYGGgEQPAQHTELMLYVMKGTAGLLRQGQVSFAKSMQAV----SGLSYGVPFKGLMAIPPAIIKQPEFYEKQTLFLKPTSGPDADIEVDPVWFAVLALGFMLGFGGYYDGAYHVFTKPGLpptlEgvSAVPLDKLKDIVDSLSTLTAASRRERPTTVSEEIFALQLSIAVAKSERALPREVFPFCLYEIEYIANTYTLTRSVFVNIEPLVTYFEKYYEVLRK-EVTGLSKEEALKPLKAVVG----LAARELSERFKQRASREAGEPLAYLFVKDFYRAVMSGNARLLEESLLRFLRELDVAL---------------------------harevpreyrddlqrfrgernvk
#=GC seq_cons                       ............................................................................................tVLhtWaGt.ptPtpasELh.hVhptThtLLRpGpls.ucShpsl....sGh.hGlsapG..AI.PAIIKQPEaYE+QohFLpPToG.cApIchDPlWFuhhALGFhhuFuGahsGtYalhTKPGl....E..shhPh-h.c.I.cul.sLTuAutptR.ohsoEElathpLuhtlAcptRsl.cEVaPhsLa.Iph.upsYT.h+os.lNlpsLspYhEcYhphlcp.phsGLsh..tLKshpAslt....hAhh-luER.h.+usptsGE.LAYlFVKDhYRAl.SGptcLlc-ulhRhhRphcshL..................................................
//