#=GF ID   Cin1_N
#=GF AC   PF20738.1
#=GF DE   Cellophane-induced 1 (cin1) repeat
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   ECOD:3373.1.1
#=GF GA   27.00 27.00;
#=GF TC   28.70 29.40;
#=GF NC   24.70 21.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Repeat
#=GF RN   [1]
#=GF RM   22771296
#=GF RT   Structure, dynamics and domain organization of the repeat
#=GF RT   protein Cin1 from the apple scab fungus.
#=GF RA   Mesarich CH, Schmitz M, Tremouilhac P, McGillivray DJ, Templeton
#=GF RA   MD, Dingley AJ;
#=GF RL   Biochim Biophys Acta. 2012;1824:1118-1128.
#=GF DR   SO; 0001068; polypeptide_repeat;
#=GF CC   Venturia inaequalis is a hemi-biotrophic fungus that causes scab
#=GF CC   disease of apple. A recently-identified gene from this fungus,
#=GF CC   cin1 (cellophane-induced 1), is up-regulated over 1000-fold in
#=GF CC   planta and considerably on cellophane membranes, and encodes a
#=GF CC   cysteine-rich secreted protein of 523 residues with eight
#=GF CC   imperfect tandem repeats of ~60 amino acids [1].
#=GF SQ   11
#=GS A0A8H3YSB2_VENIN/90-141   AC A0A8H3YSB2.1
#=GS A0A517LJL0_9PEZI/33-89    AC A0A517LJL0.1
#=GS A0A8H3YSB2_VENIN/329-386  AC A0A8H3YSB2.1
#=GS A0A517LJL0_9PEZI/160-216  AC A0A517LJL0.1
#=GS A0A8H3YSB2_VENIN/32-89    AC A0A8H3YSB2.1
#=GS A0A8H3YSB2_VENIN/146-202  AC A0A8H3YSB2.1
#=GS A0A517LJL0_9PEZI/225-277  AC A0A517LJL0.1
#=GS A0A517LJL0_9PEZI/93-149   AC A0A517LJL0.1
#=GS A0A8H3YJM6_VENIN/103-160  AC A0A8H3YJM6.1
#=GS A0A8H3YSB2_VENIN/206-262  AC A0A8H3YSB2.1
#=GS A0A8H3YSB2_VENIN/266-322  AC A0A8H3YSB2.1
A0A8H3YSB2_VENIN/90-141              ......vv---YGYDGKPLDLGFCTLAGI..REVDCRKDAQTCDKKY.ES-.---DKCLNAIKEKYKP-v..
A0A517LJL0_9PEZI/33-89               ........QYGYGYDGPPLDSNFCRNAGS..KENECRKDVVNCDKKF.DDQ.GQETQCAKNIKKKYSPY...
A0A8H3YSB2_VENIN/329-386             kekdgkrq---------PTNADFCKRAGTsvLEAECRKAVKECDKKY.QNI.GHEKECSRDLEDKYT--kg.
A0A517LJL0_9PEZI/160-216             ........DPKYGYDGPPLDSSFCRNAGS..KENECRNAVQKCDQKY.DNQ.GHESSCVKAVKDKYVNH...
A0A8H3YSB2_VENIN/32-89               ......pt--QYGYDGKPLDASFCRTAGS..REKDCRKDVQACDKKY.DDQeGRETACAKGIREKYKP-a..
A0A8H3YSB2_VENIN/146-202             .......p-PAYGYDGKPLDASFCRSFGA..KENECRKDILACDKKF.DNE.GRESACSKAIREKYKP-f..
A0A517LJL0_9PEZI/225-277             ........NGHSAYTAP----TFCNNLGN..LASECKLAAQACDQKF.DNP.ERTKTCMKEVREKYIDR...
A0A517LJL0_9PEZI/93-149              ........QPKYGYDGPPLDSGFCRNAGS..KENECKKEVQKCDQKY.DNQ.GRENQCVKDLKKKYYPN...
A0A8H3YJM6_VENIN/103-160             ..dygser------RGKKLDDSFCKKYGS..EKDECKERVKKCDKKTaDFS.EDERKCREKVERHF---ede
A0A8H3YSB2_VENIN/206-262             .......p-PVYGYDGKPLDASFCKGAGS..KENECKKDILACDKKY.DNE.GRETACAKAIREKYK--ts.
A0A8H3YSB2_VENIN/266-322             ......pv--NYGYDGKPLDASFCKKFPS..REAECRKDVENCDRKF.DDQ.GRETKCSKDIKEKYKE-e..
#=GC seq_cons                        ..........tYGYDG.PLDuoFC+sAGS..+EsECRK-VpsCDKKa.Dsp.G+EspCsKsl+-KYps....
//