#=GF ID   CoV_S2
#=GF AC   PF01601.20
#=GF DE   Coronavirus spike glycoprotein S2
#=GF PI   Corona_S2;
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   Bateman A
#=GF GA   40.00 40.00;
#=GF TC   43.30 43.00;
#=GF NC   35.60 35.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF CL   CL0595
#=GF RN   [1]
#=GF RM   2984314
#=GF RT   Cloning and sequencing of the gene encoding the spike protein of
#=GF RT   the coronavirus IBV. 
#=GF RA   Binns MM, Boursnell ME, Cavanagh D, Pappin DJ, Brown TD; 
#=GF RL   J Gen Virol 1985;66:719-726.
#=GF RN   [2]
#=GF RM   32150576
#=GF RT   Structure of mouse coronavirus spike protein complexed with
#=GF RT   receptor reveals mechanism for viral entry.
#=GF RA   Shang J, Wan Y, Liu C, Yount B, Gully K, Yang Y, Auerbach A,
#=GF RA   Peng G, Baric R, Li F;
#=GF RL   PLoS Pathog. 2020;16:e1008392.
#=GF RN   [3]
#=GF RM   26206723
#=GF RT   Bat-to-human: spike features determining 'host jump' of
#=GF RT   coronaviruses SARS-CoV, MERS-CoV, and beyond.
#=GF RA   Lu G, Wang Q, Gao GF;
#=GF RL   Trends Microbiol. 2015;23:468-478.
#=GF DR   INTERPRO; IPR002552;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   The coronavirus spike glycoprotein forms the characteristic
#=GF CC   'corona' after which the group is named. The Spike glycoprotein
#=GF CC   is translated as a large polypeptide that is subsequently
#=GF CC   cleaved to S1 Pfam:PF01600 and S2 [1], [2]. The S2 subunit
#=GF CC   normally contains multiple key components, including one or more
#=GF CC   fusion peptides (FP), a second proteolytic site (S2') and two
#=GF CC   conserved heptad repeats (HRs), driving membrane penetration and
#=GF CC   virus-cell fusion. The HRs can trimerize into a coiled-coil
#=GF CC   structure built of three HR1-HR2 helical hairpins presenting as
#=GF CC   a canonical six-helix bundle and drag the virus envelope and the
#=GF CC   host cell bilayer into close proximity, preparing for fusion to
#=GF CC   occur [3].
#=GF SQ   83
#=GS SPIKE_FIPV/836-1410        AC P10033.1
#=GS E0ZN60_BCHK9/707-1242      AC E0ZN60.1
#=GS H9BR35_9NIDO/620-1167      AC H9BR35.1
#=GS SPIKE_SARS/692-1214        AC P59594.1
#=GS A0A0K1Z074_SARS/678-1200   AC A0A0K1Z074.1
#=GS A0A346I7I8_9NIDO/562-911   AC A0A346I7I8.1
#=GS R9QTA0_SARS/677-1199       AC R9QTA0.1
#=GS H9BR17_9NIDO/631-1196      AC H9BR17.1
#=GS A0A2P1GMY0_9NIDO/588-932   AC A0A2P1GMY0.1
#=GS E0ZN52_BCHK9/697-1231      AC E0ZN52.1
#=GS A0A4D6FWE9_9GAMC/605-1133  AC A0A4D6FWE9.1
#=GS A0A222AIE9_9NIDO/589-934   AC A0A222AIE9.1
#=GS Q2QKN3_9BETC/784-1310      AC Q2QKN3.1
#=GS B6VDX8_THCOV/603-1148      AC B6VDX8.1
#=GS A0A0U1WHM0_BCHK5/776-1317  AC A0A0U1WHM0.1
#=GS SPIKE_BCHK5/775-1316       AC A3EXD0.1
#=GS B7U2N3_9BETC/798-1324      AC B7U2N3.1
#=GS A0A2Z4EVK1_9NIDO/697-1229  AC A0A2Z4EVK1.1
#=GS I7B987_9BETC/658-1193      AC I7B987.1
#=GS A0A240FW18_9ALPC/587-1098  AC A0A240FW18.1
#=GS Q6UZF4_SARS/692-1214       AC Q6UZF4.1
#=GS S5YNL4_9ALPC/774-1322      AC S5YNL4.1
#=GS A0A172AZS6_9ALPC/816-1394  AC A0A172AZS6.1
#=GS SPIKE_BCHK4/777-1316       AC A3EX94.1
#=GS E0ZN36_BCHK9/697-1231      AC E0ZN36.1
#=GS A0A0U1UZ37_9ALPC/666-1215  AC A0A0U1UZ37.1
#=GS A0A059VFK8_9ALPC/780-1344  AC A0A059VFK8.1
#=GS A0A0U1UYV9_9ALPC/789-1339  AC A0A0U1UYV9.1
#=GS A7BKC2_9BETC/798-1324      AC A7BKC2.1
#=GS I1VWF5_CVH22/576-1128      AC I1VWF5.1
#=GS A3EXJ0_BCHK9/701-1234      AC A3EXJ0.1
#=GS SPIKE_IBVB/582-1110        AC P11223.1
#=GS B3FHU5_CVTKE/592-1157      AC B3FHU5.1
#=GS A0A0U1UZD0_9ALPC/749-1300  AC A0A0U1UZD0.1
#=GS A0A125R5A5_9ALPC/863-1425  AC A0A125R5A5.1
#=GS K4JZP8_9ALPC/762-1312      AC K4JZP8.1
#=GS A0A3G8EWD5_9ALPC/802-1356  AC A0A3G8EWD5.1
#=GS A0A1L3KJ06_9NIDO/430-911   AC A0A1L3KJ06.1
#=GS SPIKE_CVPPU/831-1405       AC P07946.2
#=GS A0A1X9JJW0_9ALPC/573-1087  AC A0A1X9JJW0.1
#=GS SPIKE_CVMA5/747-1282       AC P11224.2
#=GS A0A088DJY6_9BETC/757-1280  AC A0A088DJY6.1
#=GS A0A075E3N9_9NIDO/569-1115  AC A0A075E3N9.1
#=GS A0A0U1WHD9_9ALPC/789-1339  AC A0A0U1WHD9.1
#=GS U5LNM4_9BETC/759-1294      AC U5LNM4.1
#=GS SPIKE_CVP67/784-1310       AC Q8BB25.1
#=GS B1PHI8_9ALPC/785-1335      AC B1PHI8.1
#=GS Q19U39_CVHK1/786-1312      AC Q19U39.1
#=GS A3EXH4_BCHK9/704-1237      AC A3EXH4.1
#=GS SPIKE_CVHNL/761-1313       AC Q6Q1S2.1
#=GS A0A0A7UZR7_9BETC/793-1319  AC A0A0A7UZR7.1
#=GS A0A1L2KGD3_9ALPC/779-1332  AC A0A1L2KGD3.1
#=GS H9BR00_9NIDO/612-1161      AC H9BR00.1
#=GS A0A023Y9K3_MERS/745-1284   AC A0A023Y9K3.1
#=GS H9BR08_9NIDO/623-1172      AC H9BR08.1
#=GS V9PIU7_9ALPC/836-1410      AC V9PIU7.1
#=GS A0A1B3Q5W5_9BETC/715-1252  AC A0A1B3Q5W5.1
#=GS C0KYU0_9BETC/799-1334      AC C0KYU0.1
#=GS C6GHB7_9ALPC/861-1423      AC C6GHB7.1
#=GS Q77NQ7_CVM2/787-1319       AC Q77NQ7.1
#=GS A0A0K2RVL1_9BETC/798-1324  AC A0A0K2RVL1.1
#=GS SPIKE_BCHK9/698-1234       AC A3EXG6.1
#=GS SPIKE_SARS2/710-1232       AC P0DTC2.1
#=GS A0A2P1GMX0_9NIDO/625-964   AC A0A2P1GMX0.1
#=GS SPIKE_CVHN5/786-1312       AC Q0ZME7.1
#=GS B2BW33_9GAMC/854-1422      AC B2BW33.1
#=GS A0A0S2ZWY7_9GAMC/579-1146  AC A0A0S2ZWY7.1
#=GS A0A0U1WHB7_9ALPC/786-1336  AC A0A0U1WHB7.1
#=GS A0A1L7HJ82_9ALPC/580-1095  AC A0A1L7HJ82.1
#=GS R9UQ53_MERS/778-1315       AC R9UQ53.1
#=GS SPIKE_CVH22/580-1132       AC P15423.1
#=GS Q0Q484_SARS/678-1200       AC Q0Q484.1
#=GS A0A0F6YS09_9GAMC/577-1139  AC A0A0F6YS09.1
#=GS D9J204_9ALPC/809-1384      AC D9J204.1
#=GS A0A0Y0RQT7_9ALPC/833-1407  AC A0A0Y0RQT7.1
#=GS SPIKE_BC512/780-1329       AC Q0Q466.1
#=GS A8JNZ2_9ALPC/562-1085      AC A8JNZ2.1
#=GS Q6UZF0_SARS/692-1214       AC Q6UZF0.1
#=GS H9BR25_9NIDO/614-1159      AC H9BR25.1
#=GS B1PHK2_9ALPC/790-1336      AC B1PHK2.1
#=GS I6LMN1_9NIDO/754-1168      AC I6LMN1.1
#=GS A0A0U1WHD7_9ALPC/795-1343  AC A0A0U1WHD7.1
#=GS A0A140ESF1_9NIDO/569-1115  AC A0A140ESF1.1
SPIKE_FIPV/836-1410                   ................GNVTIPTNFTISVQVEYMQVYTTPVSIDC...........ARYVCNGNPRCNKLLTQYVSACQTIEQALAMGARLENMEVDSMLFVSEN.ALK.LAS...VEAFNSTEnl....dpiYkewpsi..ggswlgGLKDI.LPSHNSk..........rkYGSAIEDLLFDKVVTSGLGTVDEdYKRCTG.....G..YDIADLVCAQYYNGIMVLPGVANADKMTMYTASLAGGITLGALG...GGAVAIPFAVAVQARLNYVALQTDVLNK....NQQILANAFNQAIGNITqafgkvndaihqtsQGLATVAKALAKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRS.QSQRFGFCGN.GTHLFSLANAAPNG.....MIFFHTVL.LPT.AYETVTAWSGICA...SDGd....rtFGLVVKD..VQL.TLF..RNLd..................dkFYLTPRTMYQPRVATSSDF..VQIEGCDVLFVNATVID.LPSI...IPD..YIDINQTVQDILENYr.pNWT...VPEFT...LDIFNAT..YLNLTGEIDDLEFRSeklhnttVELAILIDNINNTLVN..LEWLNRIET..YVKWPWYVWL..LIGLVVVFCIPL....
E0ZN60_BCHK9/707-1242                 ...............y-WISIPTNFTLGAITEYIQTTSPKVNVDC...........VKYLCGDSERCTTVLLQYGTFCDDVNKALSEVSSIIDASMISLVSEITA.DVV.RSE...NALFDTTY.........-..............NFTGL.LGCVGSncn......drttYRSALSDLLYNKVKVTDPGFMSS.YQKCISq...wG..GDIRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAVASAGYTfgvTSVGVIPFATQLQFRLNGLGVTTQVLVE....NQQLIANSFNKALVSIQ..............QGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVKSQALLAKQKISECVKS.QSLRNDFCGN.GTHVFSVPQLAPNG.....IMFLHYTY.KPT.SYALVQTAAGLCL...NNT.......-GYAPRD..GLF.VLP..NGSi...................yWQFTKMNFYNPVRLTNSNT..QVLTTCSVNYTTVNYTV.LPPT...DNM..DFNFTAEFEKWYKNH..sSQF...NNTFN...PGDFNFS..TVDIQNEL-------.......NTLNAVVKQLNESFID..LKKLNVYEQ..TIKWPWYIWLamIAGLVGLALAV-vmll
H9BR35_9NIDO/620-1167                 ................GNISVPTNFTLSVQNEYFQIQSEQVVIDC...........GKYVCNGNYRCLQLLSQYTSACSNIESTLHGAIQLDSVEVSNLITTSKS.GFN.LAN...ISNFQSDF.........-..............NFTML.LADQPR.............TFSAIEDLLFNKVVTNGLGTVDQdYKKCSK.....G..LAVADLACAQYYNGIMVLPGVVDAQKLAMYTASLTGGMVFGGVT...-AAAAVPFSTAVQARLNYVALQTNVLQE....NQKILAESFNSAISNISlaltgitnaieqtsESIVTMANAINKIQTVVNEQGEALSHLTIQLSNNFQAISSSIQDIYNRLSIVEADQQVDRLITGRLAALNAYVTQLINQLSVIRQSRELANQKINECVKS.QSQRYGFCGN.GTHLFSITTAAPNG.....IMFMHAVL.VPT.AYQEVEAIAGICV...NGT.......KAFTLRE..PML.ALY..KYGg...................eYRITSRRMYEPRLPTMSDF..IPIQSCIVQYINVTQED.LPSI...IPD..YVDVNSTVDSIINSI..pNVT...YPDLD...ISIYNQT..ILNLTQEITDLQGKAnnlseiaKELQQYIDNLNNTLVD..LEWLNRVET..YIKWPWYIWL..LIFLSLATFVCI....
SPIKE_SARS/692-1214                   ...............n-TIAIPTNFSISITTEVMPVSMAKTSVDC...........NMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQ.MYK.TPT...LKYFGG--.........F..............NFSQI.LPDPLKp...........tKRSFIEDLLFNKVTLADAGFMKQ.YGECLG.....D..INARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTfgaGAALQIPFAMQMAYRFNGIGVTQNVLYE....NQKQIANQFNKAISQIQ..............ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG.QSKRVDFCGK.GYHLMSFPQAAPHG.....VVFLHVTY.VPS.QERNFTTAPAICH...EGK.......-AYFPRE..GVF.VFN..GTS.....................WFITQRNFFSPQIITTDNT..FVSGNCDVVIGIINNTV.YDPL...QPE..LDSFKEELDKYFKNH...TSP...DVDLG..dISGINAS..VVNIQKEI-------.......DRLNEVAKNLNESLID..LQELGKYEQ..YIKWPWYVWLgfIAGLIAIVMVTI....
A0A0K1Z074_SARS/678-1200              ...............n-SIAIPTNFSISVTTEVMPVSMAKTSVDC...........TMYICGDSAECSNLLLQYGSFCTQLNRALSGIAVEQDKNTQEVFAQVKQ.MYK.TPT...LRDFGG--.........F..............NFSQI.LPDPLKp...........tKRSFIEDLLYNKVTLADAGFMKQ.YADCLG.....G..INARDLICAQKFNGLTVLPPLLTDDMIAAYTAALISGTATAGWTfgaGAALQIPFAMQMAYRFNGIGVTQNVLYE....NQKQIANQFNKAITQIQ..............ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG.QSKRVDFCGK.GYHLMSFPQAAPHG.....VVFLHVTY.VPS.QEKNFTTAPAICH...EGK.......-AYFPRE..GVF.VFN..GTS.....................WFITQRNFYSPQTITTDNT..FVAGNCDVVIGIINNTV.YDPL...QPE..LDSFKEELDKYFKNH...TSP...DVDLG..dISGINAS..VVNIQKEI-------.......DRLNEVAKNLNDSLID..LQELGKYEQ..YIKWPWYVWLgfIAGLVGLFMAII....
A0A346I7I8_9NIDO/562-911              .drsqaaidlglfqna-----------------------------...........-------------------------------------------------.---.---...--------.........-..............-----.------.............-----------------------.------.....-..-----------------------------------------MFNskaDMDHVAAFPWLAGWRF---GRQINGLSY....TTSNLIRSYRQFSNTVN..............KNFQQVATALSAMADQITMNYEVTTRLYESIQRSYQAYENNFAKIDYRMSEIE-------FMTAKLSLINQYFTKIATRQSQLASEHQIFDLRVGSCRTA.NPAC--FGGQ.GVYLAHAEFETPSQ.....KLLIVNYL.GSTeKCKQVFTANKICT..kQGT.......ATIAPFG..CAF.FKT..SDS.....................----DSEVL--RNLKDN--..---GPCHVPPINVQDCQ.LPTNeiiQLQ..LINYQETLELGIRQV...NLT...RVEFN...QKIANIS..TFN--NNIKQLVNSI.......DKVPSLGDMLEKQTIAslNSIIAQINA..WSIWDIIKWF..LVCGVIIAFSA-l...
R9QTA0_SARS/677-1199                  ...............n-SIAIPTNFSISVTTEVMPVSMAKTSVDC...........TMYICGDSLECSNLLLQYGSFCTQLNRALTGIAIEQDKNTQEVFAQVKQ.MYK.TPA...IKDFGG--.........F..............NFSQI.LPDPSKp...........tKRSFIEDLLFNKVTLADAGFMKQ.YGECLG.....D..ISARDLICAQKFNGLTVLPPLLTDEMIAAYTAALVSGTATAGWTfgaGAALQIPFAMQMAYRFNGIGVTQNVLYE....NQKQIANQFNKAISQIQ..............ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG.QSKRVDFCGK.GYHLMSFPQAAPHG.....VVFLHVTY.VPS.QERNFTTAPAICH...EGK.......-AYFPRE..GVF.VSN..GTS.....................WFITQRNFYSPQIITTDNT..FVAGSCNVVIGIINNTV.YDPL...QPE..LDSFKEELDKYFKNH...TSP...DVDLG..dISGINAS..VVNIQKEI-------.......DRLNEVAKNLNESLID..LQELGKYEQ..YIKWPWYVWLgfIAGLIAIVMVTI....
H9BR17_9NIDO/631-1196                 ...............v-NITIPKTFNISVQTEYIQISTDNIVIDC...........QRYVCNGNPRCLMLLSQYQSACSTIEQALHQKARLESLELSTMLAYSPN.TLQ.LAN...VSNFQSNNm.......gF..............NLTNL.LPQNNSp...........qKRSVIEDLLFSKVVTNGLGTVDVdYKKCTK.....G..LSIADLPCAQYYNGIMVLPGVADSGLLAAYTASLTGGMVFGGLT...-SAAAIPFATAVQARLNYVALQTDVLQR....NQQILANAFNQAMGNITlafkdvkeaiattaDAIRVVAGALDKIQQVVNSQGQALSKLTGELQRNFQAISASIEDIYNRLNDIEADAQVDRLITGRLAALNAFLTQTLTQANEVKAARELALQKINECVKD.QSKRYGFCGN.GYHLFSIANAAPKG.....FIFFHTVL.QPE.TTIEIQAIAGFCV...SDRq.....tYNYYSSNmeGQAyIAR..DTTqtifl...........hengtYMITPRKQYQPRTLAQADV..VKISTCDVTYVNLTSIE.FEQL...IPE..YVDINSTVEGILNST..lPGK...IPDLN...IGHYNNT..ILNLTTEINDLQSKAenlsmiaYQLEEYIKNINNTLVD..LEWLNRVET..YLKWPWYVWL..AIALAFTGFVTI....
A0A2P1GMY0_9NIDO/588-932              slvdrekaakdlglfs-----------------------------...........-------------------------------------------------.---.---...--------.........-..............-----.------.............-----------------------.------.....-..------------------------------------SLMFNADR...DMSTIAAFPWLAGWRF---GRQINVLSY....TSRLLVKTLVDMGKDIN..............NNFEYVRQGFNLFNNQLVINSNYINEILVLLDKFSVVNYKNFEALGYYISSVE-------YMAARLFEFQRLLNAVSLYKARFELEFKNLALRKQLCDKG.RVGCMDFN--.GVYINHAYVENDDV.....VMLLINYL.KPK.ACDYVDIKTYVCI...NGE.......TQVAPFG..CVF.EGVhlVNR.....................VDFGWANCSLPLKFRGCDY..EADKLFEYHMLYRPFLD.--SK...PSD..VVLDKLTV-------...--D...YKLVD...VDVFQGQ..VKDIIGSIRNV----.......TTIEDVVE---SSLYG..-GWLDKVNEitGLGWRWYHYI..YVIVGVLLFLL-lm..
E0ZN52_BCHK9/697-1231                 ...............y-WVSIPTNFTLAATSEYIQTSSPKINVDC...........AKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTS.DVV.RNE...NMQFDTTY.........-..............NFTSL.MGCLGSdcd.......skmYRSALSDLLYNKVKVTDPGFMQS.YQKCISq...wG..GEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAVASAGYTfgiTSVGVVPFATQLQFRLNGIGVTTQVLVE....NQKLIANSFNNALTNIQ..............KGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISECVKA.QSLRNDFCGN.GTHVLSIPQLAPNG.....ILFLHYTY.KPT.AFAVVQTAAGLCY...NGT.......-GYAPVG..GMF.VLP..NGTq...................aWHFTKMNFYNPVSITVENT..QVLSTCGLNYSHVNYTV.VNPS...VPS..DFDFEEEFNKWYKNH...SSI..fNNTFD...PSAFNFS..MVDVNKQL-------.......ATLTDVVQQLNKSYID..LKQLNVYEQ..TIKWPWYIWLamIAGLVGLALAV-vmll
A0A4D6FWE9_9GAMC/605-1133             ...............e-NILIPDSFNLTVTEEFIQTQMQQIQLNC...........LQYVCGASVQCRNLFKQYGSVCDNIVSILNGVAQSESQQLISMYSSTLP.GQD.FNP...VYANMSTG........gF..............NLSVL.LPTTPQ.............SRSFIEDLLFDKVESVGLPTDQA.YLDCMR.....G..WTARDLICAQYYNGIMVLPPIITPAMQVMYTGSFIASMAWGGLT...-AAGAIPFATQIQARINHLGITQTLLID....NQKMLAESFNNAVKYMQ..............QGFEATSSALQQIQDVVNQQGAVLQEVLNSLNKNFGAVSSVIQDIYKSLDELSANAQMDRLITGRLSALSVLASSKQADQLRVQQQRQLAQDKLNECVLS.QSTRNSFCGS.GKHVMTIPQTAPNG.....ILFVHFTY.TPQ.TFKNVTAVVGFCV...RGNttdssyeYALVPVNgrGVF.IEI..NGT.....................YYITSRDMYMPRNITAGDV..VTLTSCQANYVYVNRTV.VTTF...VDD.sDFDFDAEFDKWWNET...QHD...FPQLD...EFNYTIP..LLNITQQI-------.......QDIQDAIQGLNDSYVD..LHELSKLTT..YIKWPWYIWL.aIAFLTIIFFLI-l...
A0A222AIE9_9NIDO/589-934              akdlglfknamynspk-----------------------------...........-------------------------------------------------.---.---...--------.........-..............-----.------.............-----------------------.------.....-..--------------------------------------------...DMDHISAFPWLAGWRF---GRQINALSY....TTSILITAYDEMQKTVN..............SNFQGLATAIKAVNNQVKANYEAVTTLYQLIKQTHDAYGNDLRKVGFQLSEVE-------YMVAKLALINQYFTKVLSRQTQIVTESQLFDLRVGTCRSR.SPTC--FGGQ.GTYISHAEFETPRQ.....RVLIINYLgSKE.RCKQIFTANKICT...GRG......lAQVAPFG..CRF.EVE..DIGd...................pPVLT---NYLNGGPCHAPL..INIQDCQLPETDLQKLQ.----...---..LDNYQESLELGFREV...NYT...KIQFI...EKIANIS..KFNTE--VNKIIDSTr....avKSLNEIVSETVMLSIK..N-VLAQINA..WSIWDIAKWF..LIAFAIAVVG--mfv.
Q2QKN3_9BETC/784-1310                 ...............y-EIQIPSEFTIGNLEEFIQTSSPKVTIDC...........ATFVCGDYAACRQQLAEYGSFCENINAILIEVNELLDTTQLQVANSLMN.GVT.LST...KIKDGINFnv.....ddI..............NFSPV.LGCLGSecn.......rasTRSAIEDLLFDKVKLSDVGFVQA.YNNCTG.....G..AEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATAASLFPPWT...-AAAGVPFYLNVQYRINGLGVTMDVLSQ....NQKLIASAFNNALDAIQ..............EGFDATNSALVKIQSVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAKAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKS.QSSRINFCGN.GNHIISLVQNAPYG.....LYFIHFSY.VPT.KYVTAKVSPGLCI...AGD.......IGISPKS..GYF.INV..NNS.....................WMFTGSGYYYPEPITQNNV..VMMSTCAVNYTKAPDLM.LNTS...TPN..LPDFKEELYQWFKNQ...SSV...APDLS...LDYINVT..FLDLQDEM-------.......NRLQEAIKVLNHSYIN..LKDIGTYEY..YVKWPWYVWL..LIGLAGVAMLVL....
B6VDX8_THCOV/603-1148                 ................GNITIPLNFTISIQAEYLQIQAQHTVVDC...........QTYVCNGNAKCLQLLQQYSTACSNIEQSLTMSARLDNAETLAMVQTSTQ.GYH.LSK...IEQHDNQY.........-..............NLTAI.LPNKQG.............GRSAIEDLLFDKVVTNGLGTVDQdYKECTK.....G..VSLADLACAQYYSGIMVLPGVVDAEKMAMYTASLTGGMFFGGLT...-AASSIPFSVAVQARLNYVALQTDVLQK....NQQILANSFNQAMGNITlafssvndalqqtsEVIQTVANALNKIQDVVNKQGSALNHLTLQLQNNFDAISHSIADIYARLDEVEANQQVDRLITGRLAALNAYVTQVLTQISQLKAQRQLAQEKINECVKS.QSDRFGFCGN.GSHLFSITQAAPNG.....ILFLHTVL.TPT.DRVQVNAIAGICV...SDS.......-AFVLRE..PNL.AFF..QHDg...................kWLISPRRLFQPRPATVADF..VQIQSCEVTFYNTTYDE.LPQL...IPD..YVDVNQTVSDILANK...TDP...SLDLK...LDIYNQT..VLNLSAEVDELFQRAqnltlifKQLEQYINNINNTLVD..LEWLNRVET..YIKWPWWVWL..LIVLAIAAFACI....
A0A0U1WHM0_BCHK5/776-1317             ..............fv--VAVPTNFTFGVTQEFIETTIQKITVDC...........KQYVCNGFKKCEDLLKEYGQFCSKINQALHGANLRQDESISNLFSSIKT.QNT.QPL...QAGLNGDFnl.....tmL..............QIPQV.TTGERK.............YRSAIEDLLFNKVTIADPGYMQG.YDECMQq...gP..QSARDLICAQYVAGYKVLPPLYDPYMEAAYTSSLLGSIAGASWTaglSSFAAIPFAQSIFYRLNGVGITQQVLSE....NQKIIANKFNQALGAMQ..............TGFTTTNLAFNKVQDAVNANAMALSKLAAELSNTFGAISSSISDILARLDTVEQEAQIDRLINGRLTSLNAFVAQQLVRTEAAARSAQLAQDKVNECVKS.QSKRNGFCGT.GTHIVSFAINAPNG.....LYFFHVGY.QPT.SHVNATAAYGLCN...TENp.....pKCIAPID..GYF.VLN..QTIstva............nsdqqWYYTGSSFFYPEPITEANS..KYVSM-DVKFENLTNRL.PPPL...LSNstDLDFKEELEEFFKNV...SSQ...GPNFQ..eISKINTT..LLNLNTEL-------.......MVLSEVVKQLNESYID..LKELGNYTF..YQKWPWYIWLgfIAGLVALALCVF....
SPIKE_BCHK5/775-1316                  ..............fv--VAVPTNFTFGVTQEFIETTIQKITVDC...........KQYVCNGFKKCEDLLKEYGQFCSKINQALHGANLRQDESIANLFSSIKT.QNT.QPL...QAGLNGDFnl.....tmL..............QIPQV.TTGERK.............YRSTIEDLLFNKVTIADPGYMQG.YDECMQq...gP..QSARDLICAQYVAGYKVLPPLYDPYMEAAYTSSLLGSIAGASWTaglSSFAAIPFAQSIFYRLNGVGITQQVLSE....NQKIIANKFNQALGAMQ..............TGFTTTNLAFNKVQDAVNANAMALSKLAAELSNTFGAISSSISDILARLDTVEQEAQIDRLINGRLTSLNAFVAQQLVRTEAAARSAQLAQDKVNECVKS.QSKRNGFCGT.GTHIVSFAINAPNG.....LYFFHVGY.QPT.SHVNATAAYGLCN...TENp.....qKCIAPID..GYF.VLN..QTTstva............dsdqqWYYTGSSFFHPEPITEANS..KYVSM-DVKFENLTNRL.PPPL...LSNstDLDFKEELEEFFKNV...SSQ...GPNFQ..eISKINTT..LLNLNTEL-------.......MVLSEVVKQLNESYID..LKELGNYTF..YQKWPWYIWLgfIAGLVALALCVF....
B7U2N3_9BETC/798-1324                 ...............y-EIQIPSEFTIGNMEEFIQTSSPKVTIDC...........SAFVCGDYAACKSQLVEYGSFCDNINAILTEVNELLDTTQLQVANSLMN.GVT.LST...KLKDGVNFnv.....ddI..............NFSPV.LGCLGSdcn.......kvsSRSAIEDLLFSKVKLSDVGFVEA.YNNCTG.....G..AEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATSASLFPPWS...-AAAGVPFYLNVQYRINGIGVTMDVLSQ....NQKLIANAFNNALGAIQ..............EGFDATNSALVKIQSVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKS.QSSRINFCGN.GNHIISLVQNAPYG.....LYFIHFSY.VPT.KYVTAKVSPGLCI...AGD.......RGIAPKS..GYF.VNV..NNT.....................WMFTGSGYYYPEPITGNNV..VVMSTCAVNYTKAPDVM.LNIS...TPN..LPDFKEELDQWFKNQ...TSV...APDLS...LDYINVT..FLDLQDEM-------.......NRLQEAIKVLNQSYIN..LKDIGTYEY..YVKWPWYVWL..LIGFAGVAMLVL....
A0A2Z4EVK1_9NIDO/697-1229             ...............y-QVSVPTNFTLVASTEYIQTYASKISIDC...........AKYLCGDSSQCRTVLLQYGTFCNDVNVALTRVFTLLDNSLVDTFSSLKS.TAP.VQL...--AYTGDF.........-..............NFTSL.VGCIGTdcd.......sksHRSALSDLLFSKVSVADPGFMQS.YQQCLDa..qwG..GNIRDLLCTQTFNGISVLPPIVSPSMQALYTTALVGGIAASGFTfgvSSAAVIPFATQLQFRLNGLGVTTNVLME....NQQLIANAFNKALVSIQ..............EGFTATNQALNKIQTVVNNNALQLQVLVQQLGNTFGAISASVNEIFSRLDLLEANAEVDRLISGRMVVLNTYVTQLLIQASELRSQAELAKQKMSECVKS.QSLRNDFCGN.GTHVLSIPQLAPNG.....MLFIHYSY.QPT.KYAQVYTTAGLCF...NGT.......-GFVPRD..GLF.VRE..NNEs..................qvWYFTKASFYNPVNLSYENT..HLLDTCGVNYTTVNNSV.LNPI...EPP..NYNFQEEFDKYFKNQ..sSQF...NITFD...SSQFNVS..IVNLNEQM-------.......AALDSVVKSLNESFID..LKKLGVYTQ..QPNTPWYAWLgmIAGLVGLALAV-fm..
I7B987_9BETC/658-1193                 ...............y-EMQIPTNFTIGHHEEFIQIRAPKVTIDC...........AAFVCGDNAACRQQLVEYGSFCDNVNAILNEVNNLLDNMQLQVASALMQ.GVT.ISS...RLPDGISGpi.....ddI..............NFSPL.LGCIGStcaedgngpsairGRSAIEDLLFDKVKLSDVGFVEA.YNNCTG.....G..QEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWT...-AAAGVPFSLNVQYRINGLGVTMNVLSE....NQKMIASAFNNALGAIQ..............EGFDATNSALGKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLINGRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKS.QTTRINFCGN.GNHILSLVQNAPYG.....LCFIHFSY.VPT.SFKTANVSPGLCI...SGD.......RGLAPKA..GYF.VQD..NGE.....................WKFTGSNYYYPEPITDKNS..VVMISCAVNYTKAPEVF.LNNS...IPN..LPDFKEELDKWFKNQ...TSI...APDLSl.dFEKLNVT..FLDLTYEM-------.......NRIQDAIKKLNESYIN..LKEVGTYEM..YVKWPWYVWL..LIGLAGVAVCVL....
A0A240FW18_9ALPC/587-1098             ..............sf--VELALDHVLVSESEYFQTEMPVFDIDC...........EKYICDNSESCRMLLEQYAGFCSKITSDVKGNSQLLNANTLAMYKNIVP.SDS.IKP...IENFGD--.........F..............NMSMF.IDKS--.............GRSVLEDLLFDKIVTTGPGFYED.YYKCRT.....-..TTVKDLVCAQYYNGIMIIPPIQDAETIGMYGGIVAAGMTMGLFG...GQATMGTWQIAMSARLNAVGVTQGMIME....DVQKLANGFNTLATSVS..............KMASVTADALSRIQGVVNANALQVELLARATMDNFGAISSNFEIIEKRLKQVQAEQQMDRVINGKMNALLNFVSNYKLKVSELTSIQQLVKQKVQECVHA.QSLRNGFCGS.GLHVMSIPQLVPNG.....VMFLHFSL.VKN.NSIIVKQTPGLCK...EDK......iNCIVPKS..GIF.VSK..NDS....................nWYITPRNKYVPKNITNSD-..IIFTTYSENFTVINNTIqFPGI..eFPQ..DGDFDGQIK----NV...TLE...LQSLK...DVVANMS..YLDLSNHT-------.......ALLKNISEEVKKMNIT..VSQFKQYVK..YVKWPWYVWL..LIVMALIAFG--lv..
Q6UZF4_SARS/692-1214                  ...............n-TIAIPTNFSISITTEVMPVSMAKTSVDC...........NMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQ.MYK.TPT...LKYFGG--.........F..............NFSQI.LPDPLKp...........tKRSFIEDLLFNKVTLADAGFMKQ.YGECLG.....D..INARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTfgaGAALQIPFAMQMAYRFNGIGVTQNVLYE....NQKQIANQFNKAISQIQ..............ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG.QSKRVDFCGK.GYHLMSFPQAAPHG.....VVFLHVTY.VPS.QERNFTTAPAICH...EGK.......-AYFPRE..GVF.VFN..GTS.....................WFITQRNFFSPQIITTDNT..FVSGNCDVVIGIINNTV.YDPL...QPE..LDSFKEELDKYFKNH...TSP...DVDLG..dISGINAS..VVNIQKEI-------.......DRLNEVAKNLNESLID..LQELGKYEQ..YIKWPWYVWLgfIAGLIAIVMVTI....
S5YNL4_9ALPC/774-1322                 ...............g-VISIATNFTLSVVTEYIQLANTPISVDC...........AMYVCNGNPRCNMLLAQYSSACQTIENALQLSAKLESIEVTNMLTVSED.NLQ.IAN...ISTFNGGG.........Y..............NFTNL.MGTTYS.............TKSVVEDILFDKVVTSGLGTVDAdYKACSN.....G..LSIADLVCAQYYQGVMVLPGVVDAAKLHMYSASLMGGMALGGVT...-AAAALPFSYAVQARLNYVALQTDVLQR....NQQILAESFNNAIGNITnafasvndaisqtaEGLSTVAEALSKVQDVVNNQGMALNHLTLQLQNNFQAISSSIADIYRRLDQLTADAQVDRLINGRLAALNAFVSQTLTKYSQVQASRSLAKQKINECVLS.QSPRYGFCGDgGRHVFTVTQAAPQG.....ILFLHTVL.RPT.GSVNVTAAAGICV...DGA.......-GYALNQ..PGL.VLI..YQDg...................tYLITPRVMFEPRQPQISDF..VRIEGCDVEYFNVTGES.LPDI...FPD..FIDVNKTLEDILSQL..qNNT...GPKFD...IDIFNAT..YLNLSSEIADLEMRSeslhnttEELKRLIDNINSTLVD..LEWLNRVET..YIKWPWWVWL..LIAIALIFTVS-l...
A0A172AZS6_9ALPC/816-1394             ................GNVTIPSNFTISVQVEYLQMSSEAVSIDC...........AQYVCNGNPRCNRLLAQYISACHAIEQALITSTRLEALELESMISISDN.ALA.LAT...VETFNSSDyl.....dpVyndqhntiggiymdGLKDL.LPRRSCank.......hgtCRSVIEELLFNKVVTSGLGTVDEdYKRCTN.....G..LDIADLVCAQYYNGIMVLPGVVNADKMAMYTASLAGGITLGALG...GGLVSVPFATAVQARLNYVALQTDVLQQ....NQKILAASFNQAIGNITlafgkvnsaiqqtaQGLSTVAQALTKVQDVVNSQGKALNHLTAQLQNNFQAISSSIEDIYYKLDEVNADAQVDRLITGRLASLNAFVTQTLTNQAQIRASRQLSKEKINECVRS.QSSRFGFCGN.GTHLFSLANAAPRG.....VMLFHTVL.LPT.SYKTVTAWSGVCAisnNKT.......MGFIVKD..VSL.TLF..KNHd..................dkFYLTPRTMYEPRVATMSDF..VQIESCTTTFVNATVAE.LPSI...IPD..YIDINGTIKDMLDQYk.pNWT...VPELT...IDVFNQT..YLNLTGEINELENRSvilqqtvLELESLIDNINGTLVN..LEWLNRVET..FVKWPWWVWV..IIGLILLIALP-m...
SPIKE_BCHK4/777-1316                  ..............ft--AAIPTNFSFSVTQEYIETSIQKVTVDC...........KQYVCNGFTRCEKLLVEYGQFCSKINQALHGANLRQDESVYSLYSNIKT.TST.QTL...EYGLNGDFnl.....tlL..............QVPQI.GGSSSS.............YRSAIEDLLFDKVTIADPGYMQG.YDDCMKq...gP..QSARDLICAQYVSGYKVLPPLYDPNMEAAYTSSLLGSIAGAGWTaglSSFAAIPFAQSMFYRLNGVGITQQVLSE....NQKLIANKFNQALGAMQ..............TGFTTSNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILARLDTVEQDAQIDRLINGRLISLNAFVSQQLVRSETAARSAQLASDKVNECVKS.QSKRNGFCGS.GTHIVSFVVNAPNG.....FYFFHVGY.VPT.NYTNVTAAYGLCN...NNNp.....pLCIAPID..GYF.ITN..QTTtys..............vdteWYYTGSSFYKPEPITQANS..RYVSS-DVKFDKLENNL.PPPL...LENstDVDFKDELEEFFKNV...TSH...GPNFA..eISKINTT..LLDLSDEM-------.......AMLQEVVKQLNDSYID..LKELGNYTY..YNKWPWYVWLgfIAGLVALLLCVF....
E0ZN36_BCHK9/697-1231                 ...............y-WVSIPTNFTLAATSEYIQTSSPKINVDC...........AKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTS.DVV.RNE...NMQFDTTY.........-..............NFTSL.MGCLGSdcd.......skmYRSALSDLLYNKVKVTDPGFMQS.YQKCISq...wG..GEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAVASAGYTfgiTSVGVVPFATQLQFRLNGIGVTTQVLVE....NQKLIANSFNNALTNIQ..............KGFDATNEALSKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISECVKA.QSLRNDFCGN.GIHVLSIPQLAPNG.....ILFLHYTY.KPT.AFAVVQTAAGLCY...NGT.......-GYAPVG..GMF.VLP..NGTq...................aWHFTKMNFYNPVSITVENT..QVLSTCGLNYSHVNYTV.VNPS...VPS..DFDFEEEFNKWYKNH...SSI..fNNTFD...PSAFNFS..MVDVNKQL-------.......ATLTDVVQQLNKSYID..LKQLNVYEQ..TIKWPWYIWLamIAGLVGLALAV-vmll
A0A0U1UZ37_9ALPC/666-1215             ................GNVSIPSNFTVSVQVEYLQMYNKPVSVDC...........STYVCNGNPRCLKLLTQYATACRTIEESLQLSARLESVEVANMISVSEE.AIQ.LAN...VSYFDT--.........Y..............NISAL.LPRGQS.............RGSVIEDLLFNKVITSGLGTVDEdYKACTGe..gfG..AALADVFCAQYYNGIMVLPGVVDEAKMGLYTASLTGAMVMGGIT...-AAAAIPFSLAVQSRLNYVALQTDVLQE....NQKILASAFNSAMSNITyaftevknaikdtsVAINTVAQALGKIQNVVNDQGQALSQLTRQLASNFQAISSSIQDIYNRLNGLEADAQVDRLITGRLAALNAFVTQTLTKYTEVRASRQLAQQKINECVKS.QSSRYGFCGN.GTHLFSISNAAPQG.....IIFFHTVL.LPT.EYETVEAWSGVCV...DSQ.......YGLVLRN..VHD.ALY..KRNd...................sYYITSRDMYEPRVPQASDF..VRITGCGVVYLNITHVQ.IGEI...IPE..YIDVNKTLEEFLNSY..pNYT...VPDLN...LDLYNQT..VLNLTEDISKLYEKAeslhnktIILQQLIDNLNNTYVD..LEWLNRVET..YIKWPWYVWL..VIFLALAAFTFL....
A0A059VFK8_9ALPC/780-1344             ................GNISIPTNFSMSIRTEYLQLYNTPVSVDC...........ATYVCNGNSRCKQLLTQYTAACKTIESALQLSARLESVEVNSMLTISEE.ALQ.LAT...ISSFNGDG.........Y..............NFTNV.LGVSVYdpas....grvvqKRSFIEDLLFNKVVTNGLGTVDEdYKRCSN.....G..RSVADLVCAQYYSGVMVLPGVVDAEKLHMYSASLIGGMVLGGFT...-SAAALPFSYAVQARLNYLALQTDVLQR....NQQLLAESFNSAIGNITsafesvkeaisqtsKGLNTVAHALTKVQEVVNSQGAALTQLTVQLQHNFQAISSSIDDIYSRLDILSADVQVDRLITGRLSALNAFVSQTLTKYTEVQASRKLAQQKVNECVKS.QSQRYGFCGGdGEHIFSLVQAAPQG.....LLFLHTVL.VPS.DFVDVIAIAGLCV...NDE.......IALTLRE..PGL.VLF..THElqnh.............tateYFVSSRRMFEPRKPTVSDF..VQIESCVVTYVNLTRDQ.LPDV...IPD..YIDVNKTLDEILASL..pNRT...GPSLP...LDVFNAT..YLNLTGEIADLEQRSeslrnttEELQSLIYNINNTLVD..LEWLNRVET..YIKWPWWVWL..IIFIVLIFVVS-l...
A0A0U1UYV9_9ALPC/789-1339             ................GNISVPMNFSFSVQVEYIQIMLKPVTVDC...........SVYVCNGNPRCLQLLSQYASACKTIEQALQLSARLESVEVNSMVAISDT.ALN.LGV...ISNFDNTF.........-..............NLSNV.LPASVG.............GKSVIEDLLFDKVVTSGLGTVDTdYKACAEk...mA..NTIAEAGCVQYYNGIMVLPGVVDQSLLGQYTAALTGAMVMGGIT...-AAAAIPFSIAVQSRLNYLALQTDVLQR....NQQILAQSFNSAMGNITnafenvgnaieqtsQGLQTVAQALDKVQNAVNEQGNALSHLTKQLASNFQAISASIEDLYVRLGQVEADQQVDRLITGRLAALNAFVSQQLTKYTDVRASRQLAQEKINECVKS.QSFRYGFCGN.GTHVFSVANAAPDG.....IMFFHSVL.LPT.AYAEVNAYAGLCV...DDK.......-GYVLRD..PGN.VLF..KKPgn.................etYLITPRRMFEPRIPQMSDF..VQISGCNVSYVNVSSEN.LPDI...VPD..FMDVNATIQDILDKL..qNYS...KPDFG...LDIFNAT..YLNLSAEINDLTNRSqqlqaitDELRETISNINGTLVD..LEWLNRVET..YIKWPWYVWL..AIAVALIVLTG-l...
A7BKC2_9BETC/798-1324                 ...............y-EIQIPSEFTIGNMEEFIQTSSPKVTIDC...........SAFVCGDYAACKSQLVEYGSFCDNINAILTEVNELLDTTQLQVANSLMN.GVT.LST...KLKDGVNFnv.....ddI..............NFSPV.LGCLGSacs.......kvsSRSAIEDLLFSKVKLSDVGFVEA.YNNCTG.....G..AEIRDLICVQSYNGIKVLPPLLSVNQISGYTLAATSASLFPPWS...-AAAGVPFYLNVQYRINGIGVTMDVLSQ....NQKLIANAFNNALDDIQ..............EGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAMEKVNECVKS.QSSRINFCGN.GNHIISLVQNAPYG.....LYFIHFSY.VPT.KYVTAKVSPGLCI...AGD.......RGIAPKS..GYF.VNV..NNT.....................WMFTGSGYYYPEPITGNNV..VVMSTCAVNYTKAPDVM.LNIS...TPN..LHDFKEELDQWFKNQ...TSV...APDLS...LDYINVT..FLDLQDEM-------.......NRLQEAIKVLNQSYIN..LKDIGTYEY..YVKWPWYVWL..LIGFAGVAMLVL....
I1VWF5_CVH22/576-1128                 ...............a-NLSIPSNWTTSVQVEYLQITSTPILVDC...........STYVCNGNVRCVELLKQYTSACKTIEDALRISAMLESADVGEMLTFDEK.AFT.LAN...VSSFGD-Y.........-..............NLSSV.IPSLPTsgs.......rvaGRSAIEDILFSKVVTSGLGTVDAdYKKCTK.....G..LSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGIALGGLT...-SAAAIPFSLALQARLNYVALQTDVLQE....NQKILAASFNKAMTNIVdaftgvndaitqtsQAIQTVATALNKIQDVVNQQGNALNHLTSQLRQNFQAISSSIQAIYDRLDTIQADQQVDRLITGRLAALNAFVAQTLTKYTEVRASRQLAQQKVNECVKS.QSNRYGFCGN.GTHIFSIVNSAPEG.....LVFLHTVL.LPT.QYKDVEAWSGLCV...DNT.......NGYVLRQ..PNL.ALY..KEGn...................yYRITSRFMFEPRIPTMADF..VQIEKCNVTFVNISRSE.LQTI...VPE..YIDVNKTLQELIDKL..pNYT...VPDLG...IDQYNQT..ILNLTSEISTLENKSaelnytvQRLQTLIDNINSTLVD..LKWLNRVET..YLKWPWWVWL..CISVVLIFVVSI....
A3EXJ0_BCHK9/701-1234                 ...............y-WVRVPTNFTLTATTEFIETTAPKITIDC...........ARYLCGDSSRCLAVLEQYGTFCDDVNTALQRVNTMLDAAVVSLTSQLVS.DIV.PTE...NSNFDSTY.........-..............NFTAL.MGCLGSsc.........nsKRSAISDLLYNKVKIADPGFMDS.YQKCIDs..qwG..GNIRDLICTQVFNGIAVLPPIVSPGMQALYTSLLVGAVASSGYTfgiTSVGVIPFATQLQFRLNGIGVTTQVLVD....NQKLIASSFNNALNQIQ..............KGFDATNSALSKIQAVINQHATQLQTLVLQLGNTFGAISSSINIIFSRLEGLEADAEVDRLISGRMVVLNTYVTQLLVQASRIKAQSDLALQKINECVKS.QTLRNEFCGN.GTHVLSVPQLAPNG.....IMFIHYSY.TPT.QYATVQTAAGLCF...NGT.......-GYAPRN..GLF.ILP..NNSn...................fWYFTQANFYNPVNISNSNT..QVLESCSVNYTTVNYTI.LSPQ...EPL..YNNFDEEFNKFYKNL...SSV..fNNTFN...PGAFNFS..TVELQSEI-------.......ATLNEVVQQLNKSFID..LKQMNVYEQ..TIKWPWYVWLamIAGLVGLALAV-vmll
SPIKE_IBVB/582-1110                   ...............e-NVLIPNSFNLTVTDEYIQTRMDKVQINC...........LQYVCGSSLDCRKLFQQYGPVCDNILSVVNSVGQKEDMELLNFYSSTKPaGFN.TPV...LSNVSTGE.........F..............NISLL.LTNPSSr...........rKRSLIEDLLFTSVESVGLPTNDA.YKNCTA.....GplGFFKDLACAREYNGLLVLPPIITAEMQALYTSSLVASMAFGGIT...-AAGAIPFATQLQARINHLGITQSLLLK....NQEKIAASFNKAIGHMQ..............EGFRSTSLALQQIQDVVSKQSAILTETMASLNKNFGAISSVIQEIYQQFDAIQANAQVDRLITGRLSSLSVLASAKQAEYIRVSQQRELATQKINECVKS.QSIRYSFCGN.GRHVLTIPQNAPNG.....IVFIHFSY.TPD.SFVNVTAIVGFCV...KPAna...sqYAIVPANgrGIF.IQV..NGS.....................YYITARDMYMPRAITAGDV..VTLTSCQANYVSVNKTV.ITTF...VDN.dDFDFNDELSKWWNDT...KHE...LPDFD...KFNYTVP..ILDIDSEI-------.......DRIQGVIQGLNDSLID..LEKLSILKT..YIKWPWYVWL..AIAFATIIFILI....
B3FHU5_CVTKE/592-1157                 ...............a-NVSIPKELTLAVTTEYLQTRYQKVTIDC...........AKYVCGDSTRCRTLLQQYGSFCQSVNAILSGVNENEDNGLLQYAEAINT.GYT.LNF...TGYNVSNLg.......gF..............DLSLV.LPKNLTla........qnqGRSTIEDLLFDKVVTLGVSEVDQnYDKCIAs..rgGsfTNLADLTCAQFYNGVMVLPGVVDPGLMAVYTGSLIGGMALGGIT...-AAASIPFATQIQARVNYLALTQSVLLD....NQNLIANSFNKALKGIQsaldtvsqgfvevaRGFESVTVALNKVQDVVNTHSDILNKLMAQLSVNFGAVSSSLNEIYLKLDQINADAQVDRLITGRLTALSTYVASLQLAAYKADQSRRLALQKVEECVKS.QSMRYGFCGN.GSHVLTIPQSAPNG.....IFFIHYTY.QPT.SYVTIEAVPGLCVttpSGK.......YGVMPKT..GSG.IIF..RQNd...................tFFVTSTQLYEPKLLSYSEV..VNLTSCEANYYNVSESE.-TPF...QPA..LPNFDDEFNDIFTEL...NTS...KDAIKn.iSSNFNYTipILNLEDEICRLNHSIntlynysDVIDKINQGLNDTFIN..LEQLNKITR..YIKWPWYVWL..AIGFACLIFILI....
A0A0U1UZD0_9ALPC/749-1300             ................GNLTIPVNFTVSIQAEYVQVSLRAVVVDC...........ATYVCNGNVRCLQLLRQYVTACTSVENALALNARLESQEVADMLAVDYA.AYR.SSL...ELNTPQ-Fe......ngF..............NISAV.LPAGEG.............KGSFIEDLLFDKVITNGLGTVDAdYKRCIE....eK..GAIADVVCRQYYKGISVLPALTDPARMGLYSASLMGALTLGAFG...GGAVAAPFSIAVFSKLNYIALQTDLIQE....NQKLISAAFNNAMGNITkaftdvntalqhvsDAVKTVATALNKVQDAVNTQGEALQKLTSQLAQNFDAISSSIDDIYNKLDVLAADAQVDRLINGRLSALSTFVSAQLVKYSEVKASRNLAMQKVNECVKS.QSSRLGFCGN.GTHLFSMVTGAPDG.....LMFLHTVL.LPT.EYKEVAAWAGLCV...GGK.......-AFVLRD..VQL.LLF.iR-Ii...................qYLVTSRNMYQPRVPQMSDF..VQIQSCAITYVNLTSEE.FNSV...VPD..YIDVNKTLEDFAATL..pNRT...YPDFS...LDQFNHT..YLNISGQISVLENKSaelllitERLQQHIQNINNSLID..LEWLDRLET..YVKWPWWVWL..CFAVVFVILLG-l...
A0A125R5A5_9ALPC/863-1425             ................GNISIPKNFTVAVQAEYIQIQVKPVVVDC...........AKYVCNGNRHCLSLLTQYTSACQTIENALNLGARLESLMLNDMITVSDR.SLE.LAT...VEKFNATAlggeklgglYf............dGLSSL.LPPKIG.............RRSAVEDLLFNKVVTSGLGTVDDdYKKCSA.....G..TDVADLVCAQYYNGIMVLPGVVDDNKMAMYTASLIGGMAMGSIT...-SAVAVPFAMQVQARLNYVALQTDVLQE....NQKILANAFNNAIGNITlalgkvsnaittisDGFNTMSSALTKIQSVVNQQGEALSQLTSQLQKNFQAISSSIAEIYNRLEKVEADAQVDRLITGRLAALNAYVSQTLTQYAEVKASRQLAMEKVNECVKS.QSDRYGFCGN.GTHLFSLVNSAPDG.....LLFFHTVL.LPT.EWEEVTAWSGICV...NDT.......YAYVLKD.fEYS.IFS.yNNT.....................YMVTPRNMFQPRKPQMSDF..VQITSCEVTFLNTTYTT.FQEI...VID..YIDINKTVADMLEQYn.pNYT...TPELDl.qLEIFNQT..KLNLTAEINQLEQRAdnlttiaHELQEYIDNLNKTLVD..LEWLNRIET..YVKWPWYVWL..LIGLVVVFCIPL....
K4JZP8_9ALPC/762-1312                 ...............a-NITIPSNFSISVQAEYVQMFLTPVSVDC...........NMYVCNGNRHCLRLLGEYVTACKNIEAALQLSARLESIEVNNFITVSEN.AIS.LAN...ISNFDS--.........Y..............NLSVL.LPKQN-.............GKSVIEDILFDKVVTNGLGTVDQdYKECIKr..sgV..KDVADVACAQYYNGIMVLPGVVDDVKMGLYTASLTGAMVMGGLT...-AAAAIPFSIAVQSRLNYVALQTDVLQK....NQQILADSFNNAMSNITmafaqvndaiketsQAISTVAQALSKVQSVVNEQGEALSQLTKQLASNFQAISSSIEDIYNRLDMIAADAQVDRLITGRIGALNAFVTQTLTKYTEVRASRQLALQKINECVKS.QSSRFGFCGN.GTHLFSIANAAPNG.....IMLFHTVL.MPT.EYVVVRAWAGLCI...EDK.......-AFVLRD..VKT.TLF..KTGd...................tYYITTRDMYQPRLPQVSDF..VQIKDCQVDYLNLTSDE.VNNV...IPD..YIDVNKTLEDFGQIL..aNNTrppIPDFG...LDVYNNT..ILNLTAEIDVLQNKSeqllastERLQQLIDNLNKTYVD..LEWLNRFEQ..YIKWPWYVWL..AIFLAVILFSFL....
A0A3G8EWD5_9ALPC/802-1356             ................GNISIPVNFTVSVQAEYVQVSLRPVVVDC...........ATFVCNGNERCLQLLKQYVTACSSIENALALNARLESQDVASLLTYDEA.AYR.QALelkTSQFQNDF.........-..............NISAV.LPAGEN.............KGSFIEDLLFDKVITTGLGTVEAdYKACIEr...aG..TAAADITCRQYYNGISVLPALTDDGRLGLYSASLMGGITLGAFF...GGAVALPFSLAVFSKLNYLALQTDAIQE....NQKILANAFNTAMGNITnaftdvnnaiqqtgDAIKTVANALNKVQEAVNTQGAALEKLTAQLALNFEAISSSIEDIYNRLDALAADAQVDRLINGRLAALSTFTSSQLVKYSEVKSSRALALQKVNECVKS.QSSRYGFCGN.GTHLFSMVTGAPEG.....LLFLHTVL.LPT.EYRQVESWAGLCV...SNK.......-AYVLRD..VQQ.VLY..KYNd...................sYFVTPRNMFQPRVPVVADF..VQIQSCAVTYVNLTTEE.FETV...VPD..FIDVNKTLQDLVDALpkpNYT...LPNFP...LDQFNHT..YLNLTAQIGELEARAlalenisARLQGHIDSINNTLVD..LEWLDRFET..YIKWPWYVWL..AIFVVLIILAG-l...
A0A1L3KJ06_9NIDO/430-911              ...............n-DYCFTDSFTPAVKLITVPRIQPIESLSCqnlcrgqsstsSQTLCTTAELSSPLMQQCYSIVAQIRKL--SGSKFKGNEFIPTSQIVNR.-TT.FRT...IKDFDPKL.........-..............FVSNI.KIQTFK.............THNQISDRLR-------------.IFQHM-.....-..FDVSDPSYGQY-----AVP-------VGDSWSNILGVFKEGMYNqdrDMSYMAAFPWLTAWRF---GRQINALSY....SISTLMQAYDGLVADLN..............TNLMVLQNAIKQSADQVVLNSRYINQLADTLSVFSHNTHQNLVALNLHLSTVE-------YMSAKLSQFSIVLASLENALLDYKIQLQLLNQRTENCNRG.VESCMPFP--.GIYLAHQRLDTPSH.....HILLLSYM.KPN.-CEPSQIDMYYCQ...DNV.......TYVAPYG..CQF.INR..ELE.....................VIAPNATCDTPIKLLGCTY..NQTSLFMMSFVTRPFTK.LTPQ..eVPL.hIVNYTDQL-------...---...-KPID...VEIFQAN..ITTTLHEIKQI----.......QTLSEFVNNTDQAWLD..N--VPEYGTpgWSIWDYLKLA..GIILAVIIILPI....
SPIKE_CVPPU/831-1405                  ................GNVTIPTNFTISVQVEYIQVYTTPVSIDC...........SRYVCNGNPRCNKLLTQYVSACQTIEQALAMGARLENMEVDSMLFVSEN.ALK.LAS...VEAFNSSEtl.....dpIykewpn.iggswleGLKYI.LPSHNSk..........rkYRSAIEDLLFDKVVTSGLGTVDEdYKRCTG.....G..YDIADLVCAQYYNGIMVLPGVANADKMTMYTASLAGGITLGALG...GGAVAIPFAVAVQARLNYVALQTDVLNK....NQQILASAFNQAIGNITqsfgkvndaihqtsRGLATVAKALAKVQDVVNIQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRS.QSQRFGFCGN.GTHLFSLANAAPNG.....MIFFHTVL.LPT.AYETVTAWPGICA...SDGd....rtFGLVVKD..VQL.TLF..RNLd..................dkFYLTPRTMYQPRVATSSDF..VQIEGCDVLFVNATVSD.LPSI...IPD..YIDINQTVQDILENFr.pNWT...VPELT...FDIFNAT..YLNLTGEIDDLEFRSeklhnttVELAILIDNINNTLVN..LEWLNRIET..YVKWPWYVWL..LIGLVVIFCIPL....
A0A1X9JJW0_9ALPC/573-1087             ..............qi--VSLPLDHVINVKEQFVQTSAPKFDVDC...........ERYICDVSVQCKELLAKYGGYCPKIVSDIKSSSLQLDYQVQGIYKTLNV.DVK.VPD...-VDFGA--.........F..............NFSMF.ESEPN-.............GRSFIEDILFDKIVTTGPGFYQD.YYDCKK.....-..MNLEDITCKQYYNGIMVIPPVMDDTLITFWSSAVAGSMTAGLFG...GQAGMVSWSIAVAGRLNALGVMQDALVN....DVNKLANGFNNLTQYVA..............DGFKTTSQALSAIQSVVNNNAQQISQLVQGLSENFGAISNNFLVIAERLERLEAQMQMDRLINGRMNILQNFVTNYKLSISELKSQQILAQSLVNECVYA.QSNRNGFCGD.GLHLFSLMQRAPDG.....IMFFHYTL.VPN.NTIDVETTPGLCL...GNN.......VCIAPRD..GLF.VKT..NIRs..................dvWHFTTRNLYNPQAITVNNS..VIVNG-GVNFTSLNQTI.EGIE...PPT..IPSFDEEFEDLYKNI...TLE...LEQLK...NITFDPE..LLNLTYYI-------.......DRLDELSTNVSQLHVD..ISEFNKYVQ..YIKWPWYVWL..AIFLVLVLFSFM....
SPIKE_CVMA5/747-1282                  ...............y-EMQIPTNFTIGHHEEFIQTRSPKVTIDC...........AAFVCGDNTACRQQLVEYGSFCVNVNAILNEVNNLLDNMQLQVASALMQ.GVT.ISS...RLPDGISGpi.....ddI..............NFSPL.LGCIGStcaedgngpsairGRSAIEDLLFDKVKLSDVGFVEA.YNNCTG.....G..QEVRDLLCVQSFNGIKVLPPVLSESQISGYTTGATAAAMFPPWS...-AAAGVPFSLSVQYRINGLGVTMNVLSE....NQKMIASAFNNALGAIQ..............DGFDATNSALGKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLEAVEAKAQIDRLINGRLTALNAYISKQLSDSTLIKVSAAQAIEKVNECVKS.QTTRINFCGN.GNHILSLVQNAPYG.....LYFIHFSY.VPI.SFTTANVSPGLCI...SGD.......RGLAPKA..GYF.VQD..DGE.....................WKFTGSSYYYPEPITDKNS..VIMSSCAVNYTKAPEVF.LNTS...IPN..PPDFKEELDKWFKNQ...TSI...APDLSl.dFEKLNVT..LLDLTYEM-------.......NRIQDAIKKLNESYIN..LKEVGTYEM..YVKWPWYVWL..LIGLAGVAVCVL....
A0A088DJY6_9BETC/757-1280             ...............s-TLQIPINFTIGIEYETIPVTMPKVTVDC...........AQYVCGDNSECRTLLVQYGTFCETINDALRGVALQQDVNQKDVFSSVRR.LAK.VSS...PMNLGNLN........gF..............NFSSI.LNQEAIngn.......nfqARSAIEDLFFDKIETADVGFQKK.YDECTG.....G..SVVKDLGCAQSFNGLMVLPPQMTDAHVAAYTTSAALG-------...-SFFSIPNTMQMAYRFNGIAVTQKVLVD....NQKQIANKFNQAMMSVQ..............TGFKATSSALEKLQKVVNDNAQALNNLVAQLTNNFGAISSAINDITQRLDKLEADAQIDRLINGRLQVLQTFVTQQLIRASEIRASAKLAAQKMSECVQG.QSQRLDFCGR.GMHLMSFPQAAPYG.....MVFLHVLY.KPT.DYINVTTVPAICS...NDV.......-AYFPVD..GVF.VYY..NNS.....................LMFTKRNYFEPEIITIDNI..RSAGSCNVDVTYVNHTI.YNPE...MPE..LEDFKQELEEIRKNF...STGlpnRPNFTlpgLEGINAS..MVDLSEEV-------.......KILNDVVKELNASLIN..LQELGVNSQ..YIKWPWYIWLgfIAGLIAIVMATI....
A0A075E3N9_9NIDO/569-1115             ...............g-EVEIPSAFSLSVQTEYLQVQAEQVIVDC...........PQYVCNGNSRCLQLLAQYTSACSNIEAALHSSAQLDSREIINMFQTSTQ.SLQ.LAN...ITNFKGDY.........-..............NFSSI.LTTRIG.............GRSAIEDLLFNKVVTSGLGTVDQdYKSCSR.....D..MAIADLVCSQYYNGIMVLPGVVDAEKMAMYTGSLTGAMVFGGLT...-AAAAIPFATAVQARLNYVALQTNVLQE....NQKILAESFNQAVGNISlalssvndaiqqtsEALNTVAIAIKKIQTVVNQQGEALSHLTAQLSNNFQAISTSIQDIYNRLEEVEANQQVDRLITGRLAALNAYVTQLLNQMSQIRQSRLLAQQKINECVKS.QSSRYGFCGN.GTHIFSLTQTAPNG.....IFFMHAVL.VPN.KFTRVNASAGICV...DNT.......RGYSLQP..QLI.LYQ.fNNS.....................WRVTPRNMYEPRLPRQADF..IQLTDCSVTFYNTTAAN.LPNI...IPD..IIDVNQTVSDIIDNL..pTAT...PPQWD...VGIYNNT..ILNLTVEINDLQERSknlsqiaDRLQNYIDNLNNTLVD..LEWLNRVET..YLKWPWYIWL..AIALALIAFVTI....
A0A0U1WHD9_9ALPC/789-1339             ................GNISVPMNFSFSVQVEYIQIMLKPVTVDC...........SVYVCNGNPRCLQLLSQYASACKTIEQALQLSARLESVEVNSMVAISDT.ALN.LGV...ISNFDNTF.........-..............NLSNV.LPASVG.............GKSVIEDLLFDKVVTSGLGTVDTdYKACAEk...mA..NTIAEAGCVQYYNGIMVLPGVVDQSLLGQYTAALTGAMVMGGIT...-AAAAIPFSIAVQSRLNYLALQTDVLQR....NQQILAQSFNSAMGNITnafenvgnaieqtsQGLQTVAQALDKVQNAVNEQGNALSHLTKQLASNFQAISASIEDLYVRLGQVEADQQVDRLITGRLAALNAFVSQQLTKYTDVRASRQLAQEKINECVKS.QSFRYGFCGN.GTHVFSVANAAPDG.....IMFFHSVL.LPT.AYAEVNAYAGLCV...DDK.......-GYVLRD..PGN.VLF..QKPgn.................dtYLITPRRMFEPRIPQMSDF..VQISGCNVSYVNVSSEN.LPDI...VPD..FMDVNATIQDILDKL..qNYS...KPDFD...LDIFNVT..YLNLSAEINDLTNRSqqlqaitDELRATIANINGTLVD..LEWLNRVET..YIKWPWYVWL..AIAVALIVLTG-l...
U5LNM4_9BETC/759-1294                 ...............f-QVSIPQNFSFGITEEFIETSIQKVTVDC...........KQYVCNGFERCEQLLVQYGQFCSKINQALHGVNLRQDDATKSLFEDIKV.PQS.VPL...MTSLTGDYnl.....slF..............EAPNI.GSGNNN.............YRSALEDLLFDKVTLSDPGYMKG.YDECMKk...gP..PSARDLICAQYVSGYKVLPPLYDANMEAMYTASLTGSIAGSFWTgglSSAAALPFAQSMFYRMNGIGITQNVLMK....NQREIANKFNQALGAMQ..............TGFTATNQAFQKVQDVVNANAQALSKLASELANTFGAISSSIGDILKRLDVLEQEVQIDRLINGRLTSLNAFVSQQLVRSEAAARSSQLAKEKINECVKA.QSTRSGFCGQ.GTHIVSFVINAPNG.....FYFIHVGY.HPQ.DYVNQTAAYGLCD...SSS......sKCIAAKN..GYF.VKN..DSDs..................dsWSYTGSSFYQPEPITSFNS..RFVQP-EFTFQNLTNNL.PPPL...LSNnsDVTFEDELEEFYKNI...TSE...IPNFG..sISQINTT..MLNLSREM-------.......SILQQVVKDLNNSYIE..LKELGNYTY..YQKSPWYVWLgfIAGLVALALCL-ff..
SPIKE_CVP67/784-1310                  ...............y-EIQIPSEFTIGNLEEFIQTRSPKVTIDC...........ATFVCGDYAACRQQLAEYGSFCENINAILTEVNELLDTTQLQVANSLMN.GVT.LST...KIKDGINFnv.....ddI..............NFSPV.LGCLGSecn.......rasTRSAIEDLLFDKVKLSDVGFVQA.YNNCTG.....G..AEIRDLICVQSYNGIKVLPPLLSENQISGYTLAATAASLFPPWT...-AAAGVPFYLNVQYRINGLGVTMDVLSQ....NQKLIASAFNNALDAIQ..............EGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISASLQEILSRLDALEAKAQIDRLINGRLTALNAYVSQQLSDSTLVKFSAAQAIEKVNECVKS.QSSRINFCGN.GNHIISLVQNAPYG.....LYFIHFSY.VPT.KYVTAKVSPGLCI...AGD.......IGISPKS..GYF.INV..NNS.....................WMFTGSSYYYPEPITQNNV..VVMSTCAVNYTKAPDLM.LNTS...TPN..LPDFKEELYQWFKNQ...SSV...APDLS...LDYINVT..FLDLQDEM-------.......NRLQEAIKVLNQSYIN..LKDIGTYEY..YVKWPWYVWL..LIGLAGVAMLVL....
B1PHI8_9ALPC/785-1335                 ................GNITIPANFSFVVEPEYIQIMTKPVSIDC...........SVYVCNGNPRCLQLLTQYASVCRNVEEPLQLNARLEALELTSMIVVQER.TLD.LGV...AANFNDTF.........-..............DLTLA.LPRQRQ.............SRSAIEDLLFTKVITSGLGTVDEdYKACAEr...mA..NTIAEAGCVQYYNGIAVLPGVVDPSLLAQYTAALTGGMVLGGVT...-AAVAIPFSLAVQSRLNYLALQTDVLQR....NQKILAQSFNAAMGNITvafsgvsnaiqqtvSSLTTISRALNKVENAVNEQGTALSQLTKQLASNFQAVSSSIEDLYNRLDRLEADQQVDRLITGRLAALNAFVTQQLLRYSEVRASRQLAQEKINECVKS.QSSRYGFCGN.GTHVFSVANAAPDG.....IMFLHANL.VPT.AFIEVSAFAGVCV...DGR.......-ALVLRG..RDE.VLF..QKPnt.................nkYLITPRLLFEPRVPVSADF..VEVSSCNVTFVNLTVNE.LPEL...LPD..YIDVNKTLKEFAATI..pNRT...EMQLT...LNTYNAT..VLNLTDEVNSLTLQAseltkiaSELNLTISKINNTLVE..LEWLSRVET..YISWPWYVWL..AISVTLIILVG-l...
Q19U39_CVHK1/786-1312                 ...............f-EIQIPTNFTIAGHEEFIQTSSPKVTIDC...........AAFVCSNYAACHDLLSEYGTFCDNINSILNEVNDLLDITQLQVANALMQ.GVT.LSS...NLNTNLHSdv.....dnI..............DFKSL.LGCLGSqc........gssSRSLLEDLLFNKVKLSDVGFVEA.YNNCTG.....G..SEIRDLLCVQSFNGIKVLPPILSETQISGYTTAATVAAMFPPWS...-AAAGVPFSLNVQYRINGLGVTMDVLNK....NQKLIANAFNKALLSIQ..............NGFTATNSALAKIQSVVNANAQALNSLLQQLFNKFGAISSSLQEILSRLDNLEAQVQIDRLINGRLTALNAYVSQQLSDITLIKAGASRAIEKVNECVKS.QSPRINFCGN.GNHILSLVQNAPYG.....LLFIHFSY.KPT.SFKTVLVSPGLCL...SGD.......RGIAPKQ..GYF.IKQ..NDS.....................WMFTGSSYYYPEPISDKNV..VFMNSCSVNFTKAPFIY.LNNS...IPN..LSDFEAELSLWFKNH...TSI...APNLT..fNSHINAT..FLDLYYEM-------.......NVIQESIKSLNSSFIN..LKEIGTYEM..YVKWPWYIWL..LIVILFIIFLMI....
A3EXH4_BCHK9/704-1237                 ...............y-WISIPTNFTLGAVSEYIQTTSPKINVDC...........VKYLCGDSERCTTVLLQYGTFCNDVNKALSEVSAIIDASMVSLVSEITA.DVV.RSE...NAHFDTTY.........-..............NFTGL.LGCVGSsc........sstYRSALSDLLYNKVKVTDPGFMSS.YQKCISq...wG..GDVRDLFCTQNFNGISVLPPIVSPGMQALYTSLLVGAVASAGFTfgvTSVGVIPFATQLQFRLNGLGVTTQVLVE....NQQLIANSFNKALVSIQ..............QGFDATNEALSKMQSVINQHAQQLQTLVSQLGNSFGAISSSINEIFSRLDGLEANAQVDRLINGRMVVLNTYVTQLLIKASEVRAQALLAKQKISECVKS.QSLRNDFCGN.GTHVFSVPQLAPNG.....IMFLHYTY.KPT.AYAVVQTAAGLCF...NNT.......-GYAPVG..GLF.VLP..NDSi...................yWHFTKLNFYNPVNLSNSNT..QVLTTCSVNYTAVNYTV.LDPV...VNS..DFNFTAEFDKWYKNH..sSYF...NNTFN...PGDFNFS..TVDIEREL-------.......STLTEVVRQLNESFID..LKKLNVYEQ..TIKWPWYVWLamIAGLVGLALAV-vmll
SPIKE_CVHNL/761-1313                  ...............a-NLSIPSNWTTSVQVEYLQITSTPIVVDC...........ATYVCNGNPRCKNLLKQYTSACKTIEDALRLSAHLETNDVSSMLTFDSN.AFS.LAN...VTSFGD-Y.........-..............NLSSV.LPQRNIrss.......riaGRSALEDLLFSKVVTSGLGTVDVdYKSCTK.....G..LSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGMVLGGLT...-SAAAIPFSLALQARLNYVALQTDVLQE....NQKILAASFNKAINNIVasfssvndaitqtaEAIHTVTIALNKIQDVVNQQGSALNHLTSQLRHNFQAISNSIQAIYDRLDSIQADQQVDRLITGRLAALNAFVSQVLNKYTEVRGSRRLAQQKINECVKS.QSNRYGFCGN.GTHIFSIVNSAPDG.....LLFLHTVL.LPT.DYKNVKAWSGICV...DGI.......YGYVLRQ..PNL.VLY..SDNg...................vFRVTSRVMFQPRLPVLSDF..VQIYNCNVTFVNISRVE.LHTV...IPD..YVDVNKTLQEFAQNL..pKYV...KPNFD...LTPFNLT..YLNLSSELKQLEAKTaslfqttVELQGLIDQINSTYVD..LKLLNRFEN..YIKWPWWVWL..IISVVFVVLLS-l...
A0A0A7UZR7_9BETC/793-1319             ...............y-EIQIPTEFTIGNLEEFVQTTSPKVTIDC...........AAFVCGDYAACREQLVEYGSFCDNINTILNEVNSMIDTSQYQLASTLMN.GVT.LSS...RLKDGISFnq.....ddI..............NFSSV.MGCVGSnc.........isHRSAIEDILFNKVKLSDVGFVDA.YNNCTQ.....G..SEIRDLVCVQSFNGIKVLPPVLSESQMSGYATGVGLSMLFPPFS...-AAAGVPFTMSVQYRINGLGVTMDVLNQ....NQKMIANAFNNALTAIQ..............NGFDATNSALAKIQSVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQVQIDRLINGRLTALNAYVSQQLSDITLVKFSASQAIEKVNECVKS.QSTRVNFCGN.GNHILSLVQNAPYG.....LYFIHFSY.QPT.KYTTAYVSPGLCL...AGD.......VGVAPKS..GYF.IKV..NDK.....................WMFTGSAYYHPEPITNDNV..IMMNNCAVNFTKAPDVV.LNTS...IPN..LPDFKEELDKWFKNQ...SSV...APDLSl.dLERINVT..FLDLQEEM-------.......DRIQDAIKKLNDSYIN..LKEIGTYEM..YVKWPWYVWL..LIGLAGVAVLVL....
A0A1L2KGD3_9ALPC/779-1332             ...............a-NISIPTNFTTSVQVEYLQISLKPVVVDC...........NTYVCNGNPKCLKLLSEYATACKTAEEALQLSARMEASEVNSAITYSEE.SYR.LAE...--NITNDV.........F..............NMSAL.IPSVVVgagq.....gysaKRSFVEDLLFDKVVTSGLGTVDKdYKDCSK.....G..LSIADLACAQYYNGIMVLPGVVDAERMAMYTGSLTGAMVMGGVT...-AAASIPFSLAVQSRLNYVALQTDVLQR....NQQILADSFNKAIGGITdaltnvndallqtsQAIGTIAGALNKIESVVNEQGLALSHLTKQLKNNFQAISSSIDDIYNRLDELAANAQVDRLITGRLSALNSFVAQTLTRYTQVRASRELALQKVNECVKS.QTSRYGFCGN.GTHLFSIVNAAPDG.....LIFFHTVL.LPT.AYVDVQAWSGVCI...DAM.......-GFVVRD..FSL.TLV..RHDd...................kYLLTPRNMFEPRTPRVEDF..VRINDCNVTFLNITADT.LPEV...FPG..YVDVNKTLDDFLSSL..pNRT...QPDLS...LDVFNQT..FLNLSGEIDNLELKSqsilnttVKLQQLIDEINSTLVD..LEWLNRVEN..YIKWPWWVWL..IIVVVLIFVVS-l...
H9BR00_9NIDO/612-1161                 ................QNISIPINFTVSIQTEYIQIEHHPITVDC...........RKYVCNGNPRCLQLLLQYTSACSTIEQALALNARLEAASIQSMLTYNPQ.TVK.LAN...ITNFQSDGi.......kY..............DLSSI.LPVSTG.............SRSAIEDLLFDKVVTNGLGTVDQdYKKCTN.....G..YSIADLVCAQYYNGIMVLPGVADPEKLAQYTASLTGAMVFGGLT...-SAAAIPFSLAVQSRLNYVALQTDVLQR....NQQILATSFNNAMGNITqafhdvnqglsqvaGAVTTIANAFTKIQDVVNAQGTALSTLTTQLTNNFQAISASIADIYNRLNQIEADAQVDRLITGRLAALNAFVTQTLAKLAEVRQSRQLALDKVNECVKS.QSARYGFCGN.GTHLFSFSNAAPYG.....LMFFHTVL.LPT.QYATVQAYSGICH...QNR.......-ALTLRD..PSL.ALF..QKDd...................kYLITPRNMYQPRTATKADF..VYIQSCDITFLNLTDTT.IEAV...IPD..YVDVNKTIEEFLNNL..pNYT...LPDLS...IDRYNNT..ILNLTTEIADLNGKAanlsqivEELEQYIKNINSTLVD..LEWLNRVET..YIKWPWYIWL..AIALAFTAFVAI....
A0A023Y9K3_MERS/745-1284              ..............fv--VEIPTNFSFGVTQEYIQTTIQKVTVDC...........KQYVCNGFAKCEQLLREYGQFCAKINQALHGANLRQDESIANLFANIKT.EAT.QPL...DAGLNGDFnl.....tlL..............QVPKV.VTSEYS.............YRSAIEDLLFNKVTIADPGYMQG.YDECMKq...gP..PSARDLICAQFVAGYKVLPPLYDPNMEAAYTSSLVGSILGAGWTagaSSFAAIPFAQSVFFRMNGIGITQQVLSE....NQKQIANKFNQALGAMQ..............TGFTTTNLAFSKVQDAVNANAQALSKLASELSNTFGAISSSISDILKRLDAVEQEAQIDRLINGRLTSLNAFVAQQLVRSETAARSAQLASDKVNECVKS.QSKRNGFCGS.GTHIVSFVINAPNG.....LYFFHVGF.VPT.SFVNATAAYGLCN...TENp.....pRCIAPID..GYF.VLN..STTtra..............adqeWYYTGSSFFSPEPITMANA..RYVSP-DTKYEQLDNKL.PPPL...LSNqtDQDFKEELEEFFKNV...SSQ...GPNFQ..eISKINAT..LLDLSGEM-------.......KILNEVVKQLNESYID..LKELGNYTY..YQKWPWYIWLgfIAGLVALALCVF....
H9BR08_9NIDO/623-1172                 ...............s-NISIPKNFTVSIQTEYIQIEQQPVVVDC...........RQYVCNGNPRCLQLLQQYTSACSTIEQALSLNARLEASSIQDLLTYSPE.TLV.LAN...ISNFDSGDl.......nY..............NLSSL.LPKELY.............GKSAIEDLLFNKVVTNGLGTVDQdYKACTN.....G..MSIADLVCAQYYNGIMVLPGVAGPEKMAQYTASLTGAMVFGGIT...-AASAIPFSLAVQSRLNYVALQTDVLQQ....NQQLLADSFNNAIGNITlafkevseglsqvsGAVATVANALTKVQTVVNEQGHALATLTQQLANNFQAISASISDIYNRLNQLEADAQVDRLITGRLASLNAFVTQTLSKLAEVRQQRQLATDKVNECVKS.QSPRYGFCGN.GTHLFSIVNAAPQG.....LLFFHTVL.LPT.QYAYVQAFSGICY...NGI.......-ALALND..PTL.ALF..KNGd...................kYLVSPRNMYQPRVPAQADF..VYIETCTITYLNLTDLT.IDVV...IPD..YVDVNQTVNDILSKL..pNST...GPSLT...IDQYNNT..ILNLTTEIADLNNRTqnlsdvvQNLEEYIHKLNATLVD..LDWLNRVET..YIKWPWWVWL..LITLAIVAFVVI....
V9PIU7_9ALPC/836-1410                 ................GNVTIPTNFTISVQVEYMQVYTTPVSIDC...........ARYVCNGNPRCNKLLTQYVSACQTIEQALAMGARLENMEVDSMLFVSEN.ALK.LAS...VEAFNSTEnl....dpiYkewpsi..ggswlgGLKDI.LPSHNSk..........rkYGSAIEDLLFDKVVTSGLGTVDEdYKRCTG.....G..YDIADLVCAQYYNGIMVLPGVANADKMTMYTASLAGGITLGALG...GGAVAIPFAVAVQARLNYVALQTDVLNK....NQQILANAFNQAIGNITqafgkvndaihqtsQGLATVAKALAKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRS.QSQRFGFCGN.GTHLFSLANAAPNG.....MIFFHTVL.LPT.AYETVTAWSGICA...SDGd....rtFGLVVKD..VQL.TLF..RNLd..................dkFYLTPRTMYQPRVATSSDF..VQIEGCDVLFVNATVID.LPSI...IPD..YIDINQTVQDILENYr.pNWT...VPEFT...LDIFNAT..YLNLTGEIDDLEFRSeklhnttVELAILIDNINNTLVN..LEWLNRIET..YVKWPWYVWL..LIGLVVVFCIPL....
A0A1B3Q5W5_9BETC/715-1252             ...............y-WVSIPTNFTLAATTEYIQTTAPKVNVDC...........VKYLCGDSERCIDVLSQYGAFCEDVNKALADVSAIIDSSMVTMVSELTA.GVM.WSE...TPQANVGS.........Y..............NFSGL.MGCLGSncq.......ekqYRSAISDLLYNKVKVADPGFMGA.YQKCIDe..qwG..GSVRDLICTQTFNGISVLPPIVSPGMQALYTSLLVGAVASSGYTfgiTSVGVIPFATQLQFRLNGLGVTTNVLME....NQKLIANAFNNALTGIQ..............KGFDATNMALAKMQSVINQHAQQLSTLVDQLGNSFGAISSSINEIFSRLDELEANAQVDRLINGRMVVLNTYVTQLLIRASEVKAQAALASQKISECVKA.QSQRNDFCGN.GTHVLSIPQMAPNG.....VLFLHYSY.QPT.AYNLVRTAAGLCF...NDT.......-GYAPLG..GLF.VLP..NNTd...................rWLFTKMSFYDPVNISVSNT..QVLAACGLNYSSVNYTV.LEPA...VDT.sSFNFTEEFEKWYVNQ...SHI..fNNTFN...ASAFNFS..LVDVNEQL-------.......AILTDVVNQLNQSYID..LKQLGTYEY..TVKWPWYVWLgmIAGLVGLVLAV-vlll
C0KYU0_9BETC/799-1334                 ...............y-EMQIPTNFTIGHHEEFIQIRAPKVTIDC...........AAFVCGDNAACRQQLVEYGSFCDNVNAILNEVNNLLDNMQLQVASALMQ.GVT.ISS...RLPDGISGpi.....ddI..............NFSPL.LGCIGStcaedgngpsairGRSAIEDLLFDKVKLSDVGFVEA.YNNCTG.....G..QEVRDLLCVQSFNGIKVLPPVLSESQISGYTAGATAAAMFPPWT...-AAAGVPFSLNVQYRINGLGVTMNVLSE....NQKMIASAFNNALGAIQ..............EGFDATNSALGKIQSVVNANAEALNNLLNQLSNRFGAISASLQEILTRLDAVEAKAQIDRLINGRLTALNAYISKQLSDSTLIKFSAAQAIEKVNECVKS.QTTRINFCGN.GNHILSLVQNAPYG.....LCFIHFSY.VPT.SFKTANVSPGLCI...SGD.......RGLAPKA..GYF.VQD..NGE.....................WKFTGSNYYYPEPITDKNS..VVMISCAVNYTKAPEVF.LNNS...IPN..LPDFKEELDKWFKNQ...TSI...APDLSl.dFEKLNVT..FLDLTYEM-------.......NRIQDAIKKLNESYIN..LKEVGTYEM..YVKWPWYVWL..LIGLAGVAVCVL....
C6GHB7_9ALPC/861-1423                 ................GNITIPKNFTVAVQAEYVQIQVKPVAVDC...........AKYVCNGNRHCLNLLTQYTSACQTIENSLNLGARLESLMLNDMITVSDR.SLE.FAT...VDKFNTTAlggeklgglYf............dGLSSL.LPPRVG.............MRSAVEDLLFNKVVTSGLGTVDDdYKKCSA.....G..TDVADLVCAQYYNGIMVLPGVVDYNKMAMYTASLIGGMALGSIT...-SAVAVPFSMQVQARLNYVALQTDVLQE....NQKILANAFNNAIGNITlalgkvsnaittvsDGFNSMASALTKIQSVVNQQGEALSHLISQLQKNFQAISSSIAEIYNRLEKVEADAQVDRLITGRLAALNAYVAQTLTQYAEVKASRQLAMEKVNECVKS.QSDRYGFCGN.GTHLFSLVNSAPDG.....LLFFHTVL.LPT.EWEEVTAWSGICV...NDT.......YAYLLKD..FDH.SIFsyNGT.....................YMVTPRNMFQPRKPQMSDF..VQITSCEVTFLNTTHTT.FQEI...VID..YIDINKTIADMLEQYh.sNYT...TPELDl.qLEIFNQT..KLNLTAEIDQLEQRAdnltniaHELQQYIDNLNKTIVD..LEWLNRIET..YVKWPWYVWL..LIGLVVVFCIPL....
Q77NQ7_CVM2/787-1319                  ...............y-ELQIPTNFTIASHQEFVQTRSPKVTIDC...........AAFVCGGHTACRQQLVEYGSFCDNINAILGEVNNLIDTMQLQVASALIQ.GVT.LSS...RLSDGIGGqi.....ddI..............NFSPL.LGCLGSdcgev..tmaaqtGRSAIEDVLFDKVKLSDVGFVEA.YNNCTG.....G..QEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMFP-WS...-AAAGVPFSLSVQYRINGLGVTMNVLSE....NQKMIASAFNNAIGAIQ..............EGFAATNSALAKMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRLINGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKS.QSSRINFCGN.GNHILSLVQNAPYG.....LYFIHFSY.VPT.SFTTANVSPGLCI...SGD.......RGLAPKA..GYF.VQD..DGE.....................WKFTGSNYYYPEPITDKNS..VVMSSCAANYTKAPEVF.LNTS...IPN..LPDFKEELDKWFKNQ...TSI...APDLSl.dFEKLNVT..LLDLTDEM-------.......NRIQDAIKKLNESYIN..LKDVGTYEM..YVKWPWYVWL..LIGLAGVAVCVL....
A0A0K2RVL1_9BETC/798-1324             ...............y-EIQIPSEFTIGNFEEFIQTNSPKVTIDC...........AAFVCGDYAACREQLVEYGSFCDNINAILTEVNDLLDTTQFQVANSLMN.GVT.LSS...RLKTGINFnv.....ddI..............NFSSV.LGCVGSdcn.......tvsSRSAIEDLLFNKVRLSDVGFVEA.YNNCTG.....G..AEIRDLLCVQTFNGIKVLPPVLSENQISGYTLAATSASLFPPWT...-AAAGIPFYLNVQYRINGLGVTMDVLSQ....NQKMIANAFNNALVAIQ..............NGFDATNSALVKIQAVVNANAEALNNLLQQLSNRFGAISSSLQEILSRLDALEAQAQIDRLINGRLTALNAYVSQQLSDTTLVKFSASQAIEKVNECVKS.QSLRVNFCGN.GNHIISLVQNAPYG.....LYFIHFNY.VPT.KYVTAKVSPGLCI...AGD.......RGIAPKS..GYF.VNV..NNM.....................WMFTGSGYYYPEPITENNV..VVMNTCAVNYTKAPDVM.LNIS...IPN..LPDFKEELDQWFKNQ...TSV...APDLS...LDYINVT..FLNLQDEM-------.......NRLQESIKVLNQSYIN..LKDIGTYEY..YVKWPWYVWL..LIGLAGVAMLVL....
SPIKE_BCHK9/698-1234                  ...............y-WVKVPTNFTLSATEEYIQTTAPKITIDC...........ARYLCGDSSRCLNVLLHYGTFCNDINKALSRVSTILDSALLSLVKELSI.NTRdEVT...TFSFDGDY.........-..............NFTGL.MGCLGPncg.......attYRSAFSDLLYDKVRITDPGFMQS.YQKCIDs..qwG..GSIRDLLCTQTYNGIAVLPPIVSPAMQALYTSLLVGAVASSGYTfgiTSAGVIPFATQLQFRLNGIGVTTQVLVE....NQKLIASSFNNALVNIQ..............KGFTETSIALSKMQDVINQHAAQLHTLVVQLGNSFGAISSSINEIFSRLEGLAANAEVDRLINGRMMVLNTYVTQLLIQASEAKAQNALAAQKISECVKA.QSLRNDFCGN.GTHVLSIPQLAPNG.....VLFIHYAY.TPT.EYAFVQTSAGLCH...NGT.......-GYAPRQ..GMF.VLP..NNTn...................mWHFTTMQFYNPVNISASNT..QVLTSCSVNYTSVNYTV.LEPS...VPG..DYDFQKEFDKFYKNL...STI..fNNTFN...PNDFNFS..TVDVTAQI-------.......KSLHDVVNQLNQSFID..LKKLNVYEK..TIKWPWYVWLamIAGIVGLVLAVImlm.
SPIKE_SARS2/710-1232                  ...............n-SIAIPTNFTISVTTEILPVSMTKTSVDC...........TMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQ.IYK.TPP...IKDFGG--.........F..............NFSQI.LPDPSKp...........sKRSFIEDLLFNKVTLADAGFIKQ.YGDCLG.....D..IAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTfgaGAALQIPFAMQMAYRFNGIGVTQNVLYE....NQKLIANQFNSAIGKIQ..............DSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG.QSKRVDFCGK.GYHLMSFPQSAPHG.....VVFLHVTY.VPA.QEKNFTTAPAICH...DGK.......-AHFPRE..GVF.VSN..GTH.....................WFVTQRNFYEPQIITTDNT..FVSGNCDVVIGIVNNTV.YDPL...QPE..LDSFKEELDKYFKNH...TSP...DVDLG..dISGINAS..VVNIQKEI-------.......DRLNEVAKNLNESLID..LQELGKYEQ..YIKWPWYIWLgfIAGLIAIVMVTI....
A0A2P1GMX0_9NIDO/625-964              .....iwsegqynaps-----------------------------...........-------------------------------------------------.---.---...--------.........-..............-----.------.............-----------------------.------.....-..--------------------------------------------...DMNWVAAFPWLSGWRF---GRQINTLNY....AMVAVVDALTDYVPKLN..............KNFQYISAVLSSVSTQATTNYKSITQLY----NNFK---SSYSDLTKEINNIKLQLARDQYMAAKVATLNNLYTQVVSAKATIETDIKLFAIKRDQCRG-.--RAFGCTGNaGTYLFHSEIETEDY.....LQLIISYL.RPV.NCSFLYQTSSFCL...YNV.......-LYVPPF..PCI.IQS..KDI.....................-------PNQPSDLQYINM..TDGKECQLEVLKISGCD.QTPE...FTD..AVKFVNLFDSQIIRP...NVS...ITNLQ...---FNEK..IGNITGFFQGVKSLVsgi.eflKDPSQYFNDTVNRYYD..A-IFSNSND..WSFLDYLKVA..LVALLILLLLP-i...
SPIKE_CVHN5/786-1312                  ...............f-EIQIPTNFTIAGHEEFIQTSSPKVTIDC...........SAFVCSNYAACHDLLSEYGTFCDNINSILNEVNDLLDITQLQVANALMQ.GVT.LSS...NLNTNLHSdv.....dnI..............DFKSL.LGCLGSqc........gssSRSLLEDLLFNKVKLSDVGFVEA.YNNCTG.....G..SEIRDLLCVQSFNGIKVLPPILSETQISGYTTAATVAAMFPPWS...-AAAGVPFSLNVQYRINGLGVTMDVLNK....NQKLIANAFNKALLSIQ..............NGFTATNSALAKIQSVVNANAQALNSLLQQLFNKFGAISSSLQEILSRLDNLEAQVQIDRLINGRLTALNAYVSQQLSDITLIKAGASRAIEKVNECVKS.QSPRINFCGN.GNHILSLVQNAPYG.....LLFIHFSY.KPT.SFKTVLVSPGLCL...SGD.......RGIAPKQ..GYF.IKQ..NDS.....................WMFTGSSYYYPEPISDKNV..VFMNSCSVNFTKAPFIY.LNNS...IPN..LSDFEAELSLWFKNH...TSI...APNLT..fNSHINAT..FLDLYYEM-------.......NVIQESIKSLNSSFIN..LKEIGTYEM..YVKWPWYIWL..LIVILFIIFLMI....
B2BW33_9GAMC/854-1422                 ...............g-DVQLPRTLMLHTTTEFIQTHSPKIVIDC...........TKYVCGSSERCRRILVKYGGFCESIMRLLNGVNMADDVSVTDFLDNFNS.FDN.ISV..sLQNLNASFgq....fegY..............GFQKF.LPKSFDfdgs.....dprdARSTIEDILFDKVTTVGLGTVDAdYDKCTK.....G..LSVADLVCAQYYNGIMVLPGVADAEKMAMYTGALVGGMVLGGIT...-SAAAIPFATQIQARVNYLALTQNAIQE....NQKIIVQQFNKAIDSMTsaf.......qsvnEGFSAVSSAITEVQNAVNAQSQALTKLLGQLNYNFGATTSSIKELYERLAKLEADVQVDRLINGRLTALSAFVAARQVEAAKVASQRVLAAEKINECVKS.TSNRYGFCGN.GAHIISFPQNAPNG.....MLFVHFSL.VPN.ETITVKGIIGLCL...NNS.......IGIVPAKdrGMF.IQC..SNGtycpefensfneskngnvtfpFAITSREQYNPRQITTGDI..QMLTSCNSGYTHIEWSQ.LPLV...APP..YDDFDKEFDKLYEKW...NYT...LEELE...KLNVTFP..YLNVSEQIDIINSAM.......ENIKSQIQNLNSSYID..LEWLNKYER..YSKWPWWVWL..IIVLCFAAFCLL....
A0A0S2ZWY7_9GAMC/579-1146             ...............a-NVSVPLELTLAVTTEYLQTQYQKVVIDC...........ARYVCGESLKCRTLLQQYGSFCSSVNSILAGVNTLEDDGLLSFVEVLNS.GSN.FEF...QNYTAHNMsn....lggF..............DLSLV.LPNITSgk.........pqGRSAIEDLLFDKVTTLGFNEVERgYDKCMDsrggkV..TNAADLTCAQYYNGVLVLPGVVDPTLMGLYTTSLLGGMAFGGIT...-AAAAIPFATQVQARINYLALTQSVLMD....NQNLIANSFNNALKNIQsaldtvsqgfvevaKGFESVSMALTKIQDVVNTHSDILNKLMAQLNVNFGAISSSLQDIYAQLGDLSANAQVDRLITGRLTALSTYVTSLQLAAYKAEQSRRLAMQKIEECVKS.QSLRYGFCGN.GSHVLTIPQSAPNG.....IFFIHYTY.QPV.TFRSVLAVPGLCV...KSNt....gqYGLMPRT..GAG.IIFleNGT.....................FYVTSRTLYQPKVLSYSDV..VNLTSCEPNYYNVNQSD.-TPF...QPE..LPNFDEEFGGIYTEL...NTSkdlINNIS..tNFNYSVK..ILDLQNEICMLNSSIqqlwnvsSTLDDINSALNDTFIN..LEQLNKITR..YIKWPWYVWL..AIGFACVIFILI....
A0A0U1WHB7_9ALPC/786-1336             ................GNITIPANFSFVVQPEYIQIMTKPVSVDC...........SVYVCNGNPRCLQLLTQYASVCRTVEEPLQLNARLEALELTSMIIVQDK.TLK.LGV...ASNFNDTF.........-..............DLTLA.LPRQHQ.............SRSAIEDLLFSKIVTSGLGTVDDdYKECAAk...mA..NTIAEAGCVQYYNGIMVLPGVVDPSLLSQYTAALTGAMVLGGVT...-AAAAIPFSLAVQARLNYLALQTDVLQR....NQMILAQSFNAAMGNITvafsgvsnaiqqtaQSLNTISQALNKVENVVNEQGTALSQLTKQLASNFQAISSSIEDLYNRLDTLEADQQVDRLITGRLAALNAFVTQQLLRYSEVRASRQLAQEKINECVKS.QSSRYGFCGN.GTHVFSVANAAPDG.....IMFLHANL.VPT.AFIEVSAFAGVCV...EGR.......-ALVLRG..RDE.VLF..QKPnt.................mqYLITPRLLFEPRVPVSADF..VEVSSCNVTFINLTINE.LPEL...LPD..YIDVNKTLKEFAATI..pNRT...EMQLT...LNTYNAT..VLNLTDEVKSLMSQAddltkiaSELNLTISKINNTLVE..LEWLNRVET..YIKWPWYVWL..AIAVTLIILVG-l...
A0A1L7HJ82_9ALPC/580-1095             ...............q-QIELPIDHYVSVKEQFIQTSTPKFDVDC...........ERYICDVSSDCRELLVKYGGYCSKILADIKSSSIQLDYQILGLYKTLAV.DFK.VPD...I-DFGD--.........F..............NFSMY.MSEAN-.............GRSFIEDLLFDKIVTTGPGFYQD.YYDCKK.....-..MNLQDLTCKQYYNGIMVIPPVMDDTLITFWSSAVAGSMTAGLFG...GQAGMVSWTVALAGRLNALGVMQDALVE....DVNKLANGFNNLTQYVS..............DGFKTTSQALSTIQAVVNNNAQQVSQLVQGLSENFGAISNNFALIAERLERIEAAMQMDRLINGRMNILQNFVTNYKLSISELKSQQALAQSLINECVYA.QSSRNGFCGD.GLHLFSLMQRAPDG.....IMFFHYTL.KPN.NTIIVETTPGLCL...SND.......VCIAPKD..GLF.VRL..STArd.................tdWHFTTRNRYSPEPITVNNT..LTISG-GVNFTVVNSTI.DGIE...PPA..NPSFDEEFAELYKNV...TLE...LEQLK...NISFDPE..MLNLTYYI-------.......DRLDELATNVSQLHVD..VSEFNKFVQ..YIKWPWYVWL..AIFLVLVLFSFL....
R9UQ53_MERS/778-1315                  ...............f-KLSIPTNFSFGVTQEYIQTTIQKVTVDC...........KQYVCNGFQKCEQLLREYGQFCSKINQALHGANLRQDDSVRNLFASVKS.SQS.SPI...IPGFGGDF.........-..............NLTLL.EPVSIStg........srsARSAIEDLLFDKVTIADPGYMQG.YDDCMQq...gP..ASARDLICAQYVAGYKVLPPLMDVNMEAAYTSSLLGSIAGVGWTaglSSFAAIPFAQSIFYRLNGVGITQQVLSE....NQKLIANKFNQALGAMQ..............TGFTTTNEAFRKVQDAVNNNAQALSKLASELSNTFGAISASIGDIIQRLDVLEQDAQIDRLINGRLTTLNAFVAQQLVRSESAALSAQLAKDKVNECVKA.QSKRSGFCGQ.GTHIVSFVVNAPNG.....LYFMHVGY.YPS.NHIEVVSAYGLCD...AANp.....tNCIAPVN..GYF.IKT..NNTri................vdeWSYTGSSFYAPEPITSLNT..KYVAP-HVTYQNISTNL.PPPL...LGNstGIDFQDELDEFFKNV...STS...IPNFG..sLTQINTT..LLDLTYEM-------.......LSLQQVVKALNESYID..LKELGNYTY..YNKWPWYIWLgfIAGLVALALCVF....
SPIKE_CVH22/580-1132                  ...............a-NLSIPSNWTTSVQVEYLQITSTPIVVDC...........STYVCNGNVRCVELLKQYTSACKTIEDALRNSARLESADVSEMLTFDKK.AFT.LAN...VSSFGD-Y.........-..............NLSSV.IPSLPTsgs.......rvaGRSAIEDILFSKLVTSGLGTVDAdYKKCTK.....G..LSIADLACAQYYNGIMVLPGVADAERMAMYTGSLIGGIALGGLT...-SAVSIPFSLAIQARLNYVALQTDVLQE....NQKILAASFNKAMTNIVdaftgvndaitqtsQALQTVATALNKIQDVVNQQGNSLNHLTSQLRQNFQAISSSIQAIYDRLDTIQADQQVDRLITGRLAALNVFVSHTLTKYTEVRASRQLAQQKVNECVKS.QSKRYGFCGN.GTHIFSIVNAAPEG.....LVFLHTVL.LPT.QYKDVEAWSGLCV...DGT.......NGYVLRQ..PNL.ALY..KEGn...................yYRITSRIMFEPRIPTMADF..VQIENCNVTFVNISRSE.LQTI...VPE..YIDVNKTLQELSYKL..pNYT...VPDLV...VEQYNQT..ILNLTSEISTLENKSaelnytvQKLQTLIDNINSTLVD..LKWLNRVET..YIKWPWWVWL..CISVVLIFVVS-m...
Q0Q484_SARS/678-1200                  ...............n-SIAIPTNFSISVTTEVMPVSMAKTSVDC...........TMYICGDSLECSNLLLQYGSFCTQLNRALSGIAVEQDKNTQEVFAQVKQ.MYK.TPT...IRDFGG--.........F..............NFSQI.LPDPLKp...........tKRSFIEDLLYNKVTLADAGFMKQ.YADCLG.....G..INARDLICAQKFNGLTVLPPLLTDDMIAAYTAALISGTATAGWTfgaGAALQIPFAMQMAYRFNGIGVTQNVLYE....NQKQIANQFNKAITQIQ..............ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSALNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG.QSKRVDFCGK.GYHLMSFPQSAPHG.....VVFLHVTY.VPS.QEKNFTTAPAICH...EGK.......-AYFPRE..GVF.VSN..GSS.....................WFITQRNFYSPQIITTDNT..FVAGSCDVVIGIINNTV.YDPL...QPE..LDSFKQELDKYFKNH...TSP...DVDLG..dISGINAS..VVDIQKEI-------.......DRLNEVAKNLNESLID..LQELGKYEQ..YIKWPWYVWLgfIAGLVGLFMAII....
A0A0F6YS09_9GAMC/577-1139             ...............a-NVSIPYTLTLAVTTEYLQTSYQKVTIDC...........ARYVCGESLKCRTLLQQYGSFCTSVNNILAGVNDNEDNGMLSFVEAINT.GYS.LN-...FSSFNSSNl......ggF..............NLSLV.LPNSAKp...........sGRSFIEDLLFDKVVTVGVGEVDAnYDKCMDs..rgGkfTNAADLTCAQFYNGIMVLPGVVDPDLMTLYTGSLLGGMSFGGLS...-SAASIPFATQVQARINYLALTQSVLLD....NQNLIANSFNNALEKIQsaldvvsagfqevaKGFETVSVALSKVQDVVNSHSEILNKLMAQLNVNFGAISSSLSDIYSQLDELNANAQVDRLITGRLTALSTYAASLQLAAYKAEESRKLALQKVEECVKS.QSMRYGFCGN.GSHVLTIPQTAPNG.....MFFIHYTY.PPA.SYITVEAVPGLCV...TTRt....gsYGVMPKT..GSG.IIF..RANg...................tFFVTARTLYQPKLLSYSDV..VNLTSCEANYYNVSQDE.-TPF...QPE..LPSFDDEFDNIYTEL...NTS...KDLIDs.iYKDFNYTipILNLEDDICRLNSSInalwnysSIIDEINAALNDTYIN..LEQLNKVTR..YIKWPWYVWL..AIGFACLIFVLI....
D9J204_9ALPC/809-1384                 ................GNVTIPSNFTISVQMEYVQVSTELVSIDC...........ARYVCNGNARCGKLLSQYVSACHTIEQALAMGSRLESMELESMISISAN.ALK.LAS...VEEFNSSAml.....npVynesgntiggiyldGLKDI.LPRKNKh..........gsSRSTIEDLLFNKVVTTGLGTVDEdYKRCTK.....G..SDIADLACAQYYNGIMVLPGVANDGKMSMYTASLSGGISLGALG...GGAVAIPFSLAVQARLNYVALQTDVLQR....NQEILAASFNQAIGNITialgkvnnaiyqtsQSLSTVAQALTKVQDVVNSQGKALNHLTLQLQNNFQAISSSIQDIYYKLDDINADAQVDRLITGRLAALNAFVTQTLTRQAEVRASRQLAKEKVNECVRS.QSSRFGFCGN.GTHLFSLTNAAPNG.....MVFFHTVL.VPT.AYETVTAWSGICA...SDDs....rtFGLIVKD..VSL.TLF..RNHd..................gkFYLTPRTMYQPRVATSADF..VQIVDCDVLFVNATILE.LPSI...VPD..YIDINKTVQDLLDSYk.pNWT...VPEFS...LDIFNQT..YLNITNEINDLENRSvvlynttKELELLIQSINNTLVD..LEWLNKIET..YVKWPWYVWV..LIALIFLFVLPM....
A0A0Y0RQT7_9ALPC/833-1407             ................GNVTIPTNFTISVQVEYIQVYTTPVSIDC...........SRYVCNGNPRCNKLLTQYVSACQTIEQALAMGARLENMEVDSMLFVSEN.ALK.LAS...VEAFNSSEtl.....dpIykewpn.iggswleGLKYI.LPSDNSk..........rkYRSAIEDLLFDKVVTSGLGTVDEdYKRCTG.....G..YDIADLVCAQYYNGIMVLPGVANADKMTMYTASLAGGITLGALG...GGAVAIPFAVAVQARLNYVALQTDVLNK....NQQILASAFNQAIGNITqsfgkvndaihqtsRGLATVAKALAKVQDVVNIQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRS.QSQRFGFCGN.GTHLFSLANAAPNG.....MIFFHTVL.LPT.AYETVTAWPGICA...SDGd....rtFGLVVKD..VQL.TLF..RNLd..................dkFYLTPRTMYQPRVATSSDF..VQIEGCDVLFVNATVSD.LPSI...IPD..YIDINQTVQDILENFr.pNWT...VPELT...FDIFNAT..YLNLTGEIDDLEFRSeklhnttVELAILIDNINNTLVN..LEWLNRIET..YVKWPWYVWL..LIGLVVIFCIPL....
SPIKE_BC512/780-1329                  ................GNISIPTNFTMSVRTEYIQLFNKPVSVDC...........AMYVCNGNDRCKQLLSQYTSACKNIESALQLSARLESMEVNSMLTVSDE.ALK.LAT...ISQFPGGG.........Y..............NFTNI.LPANPG.............ARSVIEDILFDKVVTSGLGTVDEdYKRCSN.....G..LSIADLACAQHYNGIMVLPGVADWEKVHMYSASLVGGMTLGGIT...-SAAALPFSYAVQARLNYVALQTDVLQR....NQQMLANSFNSAISNITlafesvnnaiyqtsAGLNTVAEALSKVQDVVNGQGNALSQLTVQLQNNFQAISNSIGDIYSRLDQITADAQVDRLITGRLAALNAFVAQSLTKYAEVQASRTLAKQKVNECVKS.QSPRYGFCGDeGEHIFSLTQAAPQG.....LMFLHTVL.VPN.GFINVTAVTGLCV...DET.......IAMTLRQ..SGF.VLF..VQNg...................nYLVSPRKMFEPRRPEVADF..VQVKTCTISYVNITNNQ.LPDI...IPD..YVDVNKTIDEILANL..pNNT...VPDLP...LDVFNQT..FLNLTGEIADLEARSeslkntsEELRQLIQNINNTLVD..LQWLNRVET..FIKWPWYVWL..AIVIALILVVS-l...
A8JNZ2_9ALPC/562-1085                 .............rft---ELPLDHQLVLTEQFLQTTMPKFSISC...........ETYICDVSKACKNLLFRYGGFCQKIEADIRGAGVLLDSDVSGLYSTIAA.KTS.--S...ITPTTDRF.........-..............NVSQFfLPKVQSnse.......rfeSRSVIEDLLFSKIETTGPGFYGD.YYNCKK.....-..NAIQDLTCAQYHNGILVIPPVMDAETLGMYGGIAAASLTLGIFG...GQAGITTWSLAMAGRLNALGVVQNALVD....DVNKLANGFNQLTASVG..............KLALTTSSALQAIQAVVNQNAAQVESLVSGITENFGAISTNFKVISQRLDKLEADVQMDRLINGRMNVLQLFVTNYKLKIAELRNTHRYVQSLINECVYA.QSLRNGFCGQ.GLHVLSLMQNAPSG.....IMFFHYSL.IPN.NTITVKTTPGLCE...SDEl....gsKCIVAKD..GVL.VSA..NLS....................yWQWSPRNLYKPENLTFANV..IAVSR-GANYTTLNRTF.DIPE...LNS..TFPIDEEFREYFQNM...SSE...LQALK...NLTADMS..KLNISAEI-------.......QLINEIAHNVSNMRVE..VEKFQRYVN..YVKWAWWQWL..IIFIALTLLA--gl..
Q6UZF0_SARS/692-1214                  ...............n-TIAIPTNFSISITTEVMPVSMAKTSVDC...........NMYICGDSTECANLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQ.MYK.TPT...LKYFGG--.........F..............NFSQI.LPDPLKp...........tKRSFIEDLLFNKVTLADAGFMKQ.YGECLG.....D..INARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTfgaGAALQIPFAMQMAYRFNGIGVTQNVLYE....NQKQIANQFNKAISQIQ..............ESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLG.QSKRVDFCGK.GYHLMSFPQAAPHG.....VVFLHVTY.VPS.QERNFTTAPAICH...EGK.......-AYFPRE..GVF.VFN..GTS.....................WFITQRNFFSPQIITTDNT..FVSGNCDVVIGIINNTV.YDPL...QPE..LDSFKEELDKYFKNH...TSP...DVDLG..dISGINAS..VVNIQKEI-------.......DRLNEVAKNLNESLID..LQELGKYEQ..YIKWPWYVWLgfIAGLIAIVMVTI....
H9BR25_9NIDO/614-1159                 ................GNISIPVNFTVAIQPEYLQVYTEQVVVDC...........ATYVCNGNPLCNKLLLQYTSACDTIEQALQMSARLESSEVSNMLHISTQ.ALD.LAN...ISNFEG--.........Y..............NMSFV.LPAVKQ.............GRSALEDLLFTKVVTAGLGTVDAdYEKCAK.....G..MDIADLVCVQYYNGIMVLPGVANAGKMAEYTASLTGGMVMGGIT...-SAASIPFSLAVQSRLNYVALQTGVMLD....NQKLLADSFNKAMETISgafnslnsavhetiNVVNTLSSALTKIQSVVNQHTTALNQLTQQLANNFQAISSSITDIYNRLGQLEADAQVDRLITGRLAALNAFVSQTLTKAEQVRQSRLLAQQKVNECVKS.QSQRFGFCGN.GSHIFTIANAAPDG.....IMFLHTVL.QPV.SYITVVAYSGLCV...DNT.......YGYALKE..PNL.ALV..QYN....................gYYVTPRNMYQPRPATTADF..VQIQSCDVTLYNITYNN.ISLV...IPD..FVDTNKTIEDIISSI..pNNT...APSLE...IASLNLT..VLNLTSELEQLKASTgnftqisQEIQDYINKLNDTLVD..LEWLNRVET..YVKWPWWVWL..LIFLAICTFIII....
B1PHK2_9ALPC/790-1336                 ................GNISVPSNFTVSIQVEYLQMSIRPVSIDC...........AMYVCNGNPHCTRLLQQYISACRTIEEALQLSARLESFEVNSMLTVSET.ALD.LVN...ISTFGGDY.........-..............NLTAL.LPQGGG.............KRSVIEDILFDKVVTSGLGTVDEdYKRCTN.....G..IGIADVPCAQYYNGIMVLPGVVDEEKMSIYTASLLGGMTMGGFT...-PVAALPFALSVQSRLNYVALQTDVLQK....NQQILANAFNSAIGNITvafdqvttavqqtsDAIKTVASALNKVQSVVNSQGQALHQLTKQLASNFQAISASIEDIYNRLDGLAADANVDRLITGRLAALNAFVTQTLTKYTEVRASRLLAQEKINECVKS.QSTRYGFCGN.GTHLFSIPNAAPEG.....IMLFHTVL.VPT.EYVSVTAWSGYCH...NGV.......-GYAVKD..VGN.SLFqfNNT.....................FYITPRNMYQPRTPTSADF..IRISGCNVVYVNITDEQ.LPQV...QPE..FIDVNKTLEELMSRL..pNNT...GPNLP...LDIFNQT..YLNISAEIDALENKSlelqataDKLQLTIEQLNATLVD..LEWLNRFEQ..YVKWPWWVWL..TMIIALVLLT--gl..
I6LMN1_9NIDO/754-1168                 .............lnm-----------------------------...........-------------------------------------------------.---.---...--------.........-..............--CTA.LGDAIS............vYNSVITDIVESQATLDAL-----.Y-----.....-..TEMLDVAMTKF--------GTVAQTRKKRFVEFIALGVASVALV...EATVAIGLAVANANDIRELRGDVKNLRDesaaNFKAIEEKHNAFVKTTA..............DGFAAQNEVNKGFNSNIDTLQNSLKDMAIVTSQKFKELDQAIQSLVSSINSLQLKLDTEIQLSANSDSALARVLTALSLGHRTNRNLDRHISQVRTCLASiQQNSLAGCVNqGSNSIPLGIRVFNEtgdlkIVFFYATR.QRL.GYLQFKATSAFCT...NGT.......LVTAAPG..CIF.TAN..GTQ.....................---IEHSKIGPLTPCGSSFvsLPIATCPTGSVDIEGVK.-PSL...TPN..FEVPQLELK------...---...PPKLE...---VNLT..NVNLSDYIRPITPVDls...kiEDLQARFDKLNLTLTE..LSHISSSGS..GLP-TWAIIF..IVCVAVVIVLVF....
A0A0U1WHD7_9ALPC/795-1343             ................GNISVPTNFTFSVQVEYIQLMLKPVTVDC...........SVYVCNGNPRCLQLLAQYASACRTIEQALQLSARLESVEVNSMISISQE.ALA.LGV...IDNFKHDF.........-..............NLTNV.LPASVG.............AKSAVEDLLFDKVVTSGLGTVDAdYKECASr...tA..NTVAEVGCVQYYNGIMVLPGVVDQSLLAQYSAALTGAMVFGGVT...-AGAAVPFSIAVQSRLNYLALQTDVLQR....NQQQLANSFNAAMGNITeafgrvndaieqtsHAISTVAQALDKVQTVVNDQGLALSQLTKQLASNFQAISSSIEDLYNRLDRVEADLQVDRLITGRLAALNAFVAQQLTKYTDVRASRQLAQDKINECVKS.QSFRYGFCGN.GTHVFSVVNAAPDG.....MMFFHSVL.LPT.AYMEVAAFSGLCV...EGN.......-GYVLRD..TGN.VLF..EKNg...................qYLITARKMFEPRVPQTSDF..VQITGCDVVYLNVTRDE.LPTV...IPD..YIDVNSTVEDILSKL..pNRT...TPEFD...LDIFNAT..YLNLTGEIADLTARSeslknttLELKELIANINATLVD..LEWLNRVET..YIKWPWWVWL..IIVLVLILFTCL....
A0A140ESF1_9NIDO/569-1115             ...............g-EVEIPSAFSLSVQTEYLQVQAEQVIVDC...........PQYVCNGNSRCLQLLAQYTSACSNIEAALHSSAQLDSREIINMFRTSTQ.SLQ.LAN...ITNFKGDY.........-..............NFSSI.LTTRIG.............GRSAIEDLLFNKVVTSGLGTVDQdYKSCSR.....D..MAIADLVCSQYYNGIMVLPGVVDAEKMAMYTGSLTGAMVFGGLT...-AAAAIPFATAVQARLNYVALQTNVLQE....NQKILAESFNQAVGNISlalssvndaiqqtsEALNTVAIAIKKIQTVVNQQGEALSHLTAQLSNNFQAISTSIQDIYNRLEEVEANQQVDRLITGRLAALNAYVTQLLNQMSQIRQSRLLAQQKINECVKS.QSSRYGFCGN.GTHIFSLTQTAPNG.....IFFMHAVL.VPN.KFTRVNASAGICV...DNT.......RGYSLQP..QLI.LYQ.fNNS.....................WRVTPRNMYEPRLPRQADF..IQLTDCSVTFYNTTAAN.LPNI...IPD..IIDVNQTVSDIIDNL..pTAT...PPQWD...VGIYNNT..ILNLTVEINDLQERSknlsqiaDRLQNYIDNLNNTLVD..LEWLNRVET..YLKWPWYIWL..AIALALIAFVTI....
#=GC seq_cons                         .................plsIPoNFTlulpsEalQsphttlolDC...........spYVCsssscCtpLLhQYuohCpsIppuLptsuplpstpl.shhs..pp.shp.lss...htsasssh.........h..............Nhosl.Lss.ss.............tRSsIEDLLFsKVssuslGhl-t.YpcCht.....G..hsltDLhCsQaaNGIhVLPsllssshhuhYTuuLsGuhshuuhT....uAuulPFuhslQhRlNhlulppsVLpc....NQcllAsuFNpAlssIp..............puhsosupALsKlQsVVNppupALspLspQLusNFtAISSSIp-IhsRLDplEA-sQlDRLIsGRLsuLNuaVoQpLschscl+uStpLAtpKlNECVKS.QSpRhuFCGN.GsHlhSlspsAPsG.....lhFlHssh.lPT.satsVpsssGlCh...sss........uhss+s..shh.lhh..sss.....................ahhTsRshYpPcshosush..l.lssCsVsasslsps..lssl...lPs..hhDhpcplcchhcsh...sps...sPsls...lshaNsT..hLNLosEI..............scLpphlcsLNpohlD..Lc.LschEp..YlKWPWYVWL..lIuLshlhhssh....
//