#=GF ID   Corona_NS1
#=GF AC   PF06145.15
#=GF DE   Coronavirus nonstructural protein NS1
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   Pfam-B_9242 (release 9.0)
#=GF GA   25.00 25.00;
#=GF TC   26.40 29.00;
#=GF NC   22.00 16.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   2142556
#=GF RT   Sequence and expression analysis of potential nonstructural
#=GF RT   proteins of 4.9, 4.8, 12.7, and 9.5 kDa encoded between the
#=GF RT   spike and membrane protein genes of the bovine coronavirus. 
#=GF RA   Abraham S, Kienzle TE, Lapps WE, Brian DA; 
#=GF RL   Virology 1990;177:488-495.
#=GF DR   INTERPRO; IPR009314;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Bovine coronavirus NS1 encodes a 4.9 kDa protein [1].
#=GF SQ   3
#=GS A7BKC3_9BETC/1-29  AC A7BKC3.1
#=GS B7U2N4_9BETC/1-29  AC B7U2N4.1
#=GS Q2QKN2_9BETC/1-18  AC Q2QKN2.1
A7BKC3_9BETC/1-29             MTTKFVFDLLAPDDILHPFNHVKLIIRPI..
B7U2N4_9BETC/1-29             MTTKFVFDLLAPDDILHPSNHVNLIIRPI..
Q2QKN2_9BETC/1-18             MTTKFVFDLLTLDDIV-------------tl
#=GC seq_cons                 MTTKFVFDLLAPDDILHP.NHVpLIIRPI..
//