GenomeNet

Database: Pfam
Entry: DTP-pb9_A-dom_C
LinkDB: DTP-pb9_A-dom_C
Original site: DTP-pb9_A-dom_C 
#=GF ID   DTP-pb9_A-dom_C
#=GF AC   PF21424.1
#=GF DE   Distal tail protein pb9, A domain C-terminal
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   ECOD:EF19165
#=GF GA   27.00 27.00;
#=GF TC   33.50 47.00;
#=GF NC   25.30 24.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0504
#=GF RC   Paper describing PDB structure 4jmq
#=GF RN   [1]
#=GF RM   24155371
#=GF RT   Crystal structure of pb9, the distal tail protein of
#=GF RT   bacteriophage T5: a conserved structural motif among all
#=GF RT   siphophages.
#=GF RA   Flayhan A, Vellieux FM, Lurz R, Maury O, Contreras-Martel C,
#=GF RA   Girard E, Boulanger P, Breyton C;
#=GF RL   J Virol. 2014;88:820-828.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry includes phage distal tail proteins which form a
#=GF CC   hexameric ring located at the tail tube end, such as pb9 from
#=GF CC   bacteriophage T5 [1]. pb9 consists of two domains, A and B.
#=GF CC   Domain A adopts a split barrel  fold and includes residues 1 to
#=GF CC   82-172 to 205. This entry covers the C-terminal region of the A
#=GF CC   domain [1].
#=GF SQ   23
#=GS A0A5P8PLV0_9CAUD/172-203  AC A0A5P8PLV0.1
#=GS A0A6G8REG7_9CAUD/173-204  AC A0A6G8REG7.1
#=GS A0A5P8PLC9_9CAUD/173-204  AC A0A5P8PLC9.1
#=GS J9QPY7_9CAUD/174-205      AC J9QPY7.1
#=GS A0A4D6T3Y7_9CAUD/173-204  AC A0A4D6T3Y7.1
#=GS A0A5P1M8E6_9CAUD/173-204  AC A0A5P1M8E6.1
#=GS A0A193H1Q5_9CAUD/173-204  AC A0A193H1Q5.1
#=GS A0A4D5ZD52_9CAUD/173-204  AC A0A4D5ZD52.1
#=GS A0A8A6RSP2_9CAUD/173-204  AC A0A8A6RSP2.1
#=GS DIT_BPT5/173-204          AC Q6QGE8.1
#=GS A0A482N637_9CAUD/173-204  AC A0A482N637.1
#=GS A0A2Z5HSG7_9CAUD/173-204  AC A0A2Z5HSG7.1
#=GS A0A7S9XFG5_9CAUD/173-204  AC A0A7S9XFG5.1
#=GS A0A6G8RE14_9CAUD/173-204  AC A0A6G8RE14.1
#=GS A0A7S9XE92_9CAUD/173-204  AC A0A7S9XE92.1
#=GS A0A5B9NJZ4_9CAUD/173-204  AC A0A5B9NJZ4.1
#=GS I7LEG4_9CAUD/173-204      AC I7LEG4.1
#=GS A0A6G8QZR9_9CAUD/173-204  AC A0A6G8QZR9.1
#=GS A0A5Q2U7H3_9CAUD/173-204  AC A0A5Q2U7H3.1
#=GS A0A6M3H0P0_9CAUD/173-204  AC A0A6M3H0P0.1
#=GS A0A482N3X7_9CAUD/173-204  AC A0A482N3X7.1
#=GS A0A482N9F2_9CAUD/173-204  AC A0A482N9F2.1
#=GS A0A2D2W723_9CAUD/173-204  AC A0A2D2W723.1
A0A5P8PLV0_9CAUD/172-203             FQTKILNADAFGQELNADGVYQGLSLSLREAL
A0A6G8REG7_9CAUD/173-204             FRTKLMNGDSFGSTLNSNGTYTGISLSLRESL
A0A5P8PLC9_9CAUD/173-204             FQTKLMNGDSFSEEITVDGVYDGVNLVLRESL
J9QPY7_9CAUD/174-205                 FTTKLMNGDSFRESLSHDGVYTGLSLQLREHI
A0A4D6T3Y7_9CAUD/173-204             FQTKLMNGDSFSEEITVDGVYDGVNLVLRESL
A0A5P1M8E6_9CAUD/173-204             FRTKLMNGDSFGSTLNSNGTYTGISLSLRESL
A0A193H1Q5_9CAUD/173-204             FRTKLMNGDAFGSTLNNNGTYSGISLNLRESL
A0A4D5ZD52_9CAUD/173-204             FQTKLMNGDSFSEEITVDGVYDGVNLVLRESL
A0A8A6RSP2_9CAUD/173-204             FRTKLMNGDSFGSTLNNNGTYSGISLSLRESL
DIT_BPT5/173-204                     FRTKLMNGDSFGSTLNNNGTYSGISLSLRESL
A0A482N637_9CAUD/173-204             FRTKLMNADSFGSTLNNNGTYSGISLSLRESL
A0A2Z5HSG7_9CAUD/173-204             FRTKLMNGDSFGSTLNNNGTYSGISLSLRESL
A0A7S9XFG5_9CAUD/173-204             FRTKLMNGDSFGSTLNSNGTYTGISLSLRESL
A0A6G8RE14_9CAUD/173-204             FRTKLMNGDSFGSTLNSNGTYTGISLSLRESL
A0A7S9XE92_9CAUD/173-204             FRTKLMNGDSFGSTLNSNGTYTGISLSLRESL
A0A5B9NJZ4_9CAUD/173-204             FQTKLMNGDSFSEEITVDGVYDGVNLVLRESL
I7LEG4_9CAUD/173-204                 FRTKLMNGDSFGSTLNSNGTYSGISLSLRESL
A0A6G8QZR9_9CAUD/173-204             FRTKLMNADSFGSTLNNNGTYSGISLSLRESL
A0A5Q2U7H3_9CAUD/173-204             FRTKLMNGDSFTEEFTADGVYPGQSLNLRESI
A0A6M3H0P0_9CAUD/173-204             FRTKLMNGDSFGSTLNSNGTYTGISLSLRESL
A0A482N3X7_9CAUD/173-204             FRTKLMNGDAFGSTLNNNGTYSGISLNLRESL
A0A482N9F2_9CAUD/173-204             FRTKLMNADSFGSTLNNNGTYSGISLSLRESL
A0A2D2W723_9CAUD/173-204             FTTKLMNGDNFRESITIDGIYSPPTLQLREHI
#=GC seq_cons                        FRTKLMNGDSFGSTLNsNGTYoGISLSLRESL
//
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