GenomeNet

Database: Pfam
Entry: DUF1293
LinkDB: DUF1293
Original site: DUF1293 
#=GF ID   DUF1293
#=GF AC   PF06950.15
#=GF DE   Protein of unknown function (DUF1293)
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_15399 (release 10.0)
#=GF GA   25.00 25.00;
#=GF TC   25.70 27.80;
#=GF NC   24.70 20.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR009712;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several bacterial and phage proteins of
#=GF CC   around 115 residues in length. The function of this family is
#=GF CC   unknown.
#=GF SQ   26
#=GS Q8W6D3_9VIRU/1-107      AC Q8W6D3.1
#=GS Q9MBX6_9VIRU/1-115      AC Q9MBX6.1
#=GS O56847_9VIRU/3-111      AC O56847.1
#=GS A0A1S1MTN1_9GAMM/1-114  AC A0A1S1MTN1.1
#=GS A7N0P3_VIBC1/1-115      AC A7N0P3.1
#=GS Q79YY1_VIBPA/1-115      AC Q79YY1.1
#=GS E1CJD5_9VIRU/3-111      AC E1CJD5.1
#=GS A0A0J1GRS4_9GAMM/1-109  AC A0A0J1GRS4.1
#=GS Q858R2_9VIRU/3-111      AC Q858R2.1
#=GS A0A345N1M7_9VIRU/1-114  AC A0A345N1M7.1
#=GS A0A2J8GCY7_VIBDI/1-119  AC A0A2J8GCY7.1
#=GS Q7M7D1_VIBVY/1-115      AC Q7M7D1.1
#=GS Q8W6E2_9VIRU/3-108      AC Q8W6E2.2
#=GS A0A090SXC6_9VIBR/1-115  AC A0A090SXC6.1
#=GS Q7DKP8_9VIRU/1-115      AC Q7DKP8.1
#=GS Q64EV7_9VIRU/3-81       AC Q64EV7.1
#=GS A0A1E5CM78_9VIBR/3-120  AC A0A1E5CM78.1
#=GS A0A7X4LJR4_9VIBR/1-115  AC A0A7X4LJR4.1
#=GS A0A650EXI8_9VIRU/1-115  AC A0A650EXI8.1
#=GS A0A8E3XKS4_9VIRU/1-115  AC A0A8E3XKS4.1
#=GS A0A1W6TM33_9VIRU/1-115  AC A0A1W6TM33.1
#=GS Q783U4_9VIRU/1-115      AC Q783U4.1
#=GS U3A3L1_9VIBR/1-115      AC U3A3L1.1
#=GS A0A2J8GMK2_VIBDI/1-115  AC A0A2J8GMK2.1
#=GS R9TRB6_9CAUD/1-119      AC R9TRB6.1
#=GS A0A1W6UG87_9VIRU/1-115  AC A0A1W6UG87.1
Q8W6D3_9VIRU/1-107                 ........makslvssskhsp---.-------------SRG.TTiAELNVLRPVE..TVNVE..KFAQYGLGLNTDI...-PFNKQPLRIEPTYAKRLIETRAFVPNREYDIRFGSNPDDPLE-VVAVELIPKDDDLKKYF-----t.......
Q9MBX6_9VIRU/1-115                 .....................MAK.SVFVLGMDITWNSARG.DS.AQLNVSRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHEYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPVDQEIKKHFEASMK........
O56847_9VIRU/3-111                 ........nitgiviktfpks---.--------------GT.TI.AELNVLRPVE..TVNVE..KFAQYGLGLNTDI...-PFNKQPLRIEPTYAKRLIETRAFVPNREYDIRFGSNPDDPLE-VVAVELIPKDDDLKKYFTETLK........
A0A1S1MTN1_9GAMM/1-114             maiviagigitsfpesknpdv---.----------------.EK.AALEVLYPFE..SVNSP..KFKRKSAGKTT-S...TPFGKEPIAINVSYAHVLIDTGAFVADKSYDLRFEFND--QTFENEVVELIPVDAELKKHFSKSL-g.......
A7N0P3_VIBC1/1-115                 .....................MAK.SVFVLGMDITWNSARG.DS.AQLNISRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHEYALLLERTGALVPRREYQLQLEINPEDPLAGAIVTALIPVDAEIKKHFEASMK........
Q79YY1_VIBPA/1-115                 .....................MAK.SVFVLGMDITWNSARG.DS.AQLNVSRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHEYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPVDQEIKKHFEASMK........
E1CJD5_9VIRU/3-111                 ........nitgiviktfpks---.--------------GT.TI.AELNVLRPVE..TVNVE..KFAQYGLGLNTDI...-PFNKQPLRIEPTYAKRLIETRAFVPNREYDIRFGSNPDDPLE-VVAVELIPKDDDLKKYFTETLK........
A0A0J1GRS4_9GAMM/1-109             ............mitgiavrr---.----------FPSSGG.SD.AVVHVLRGID..EVKHE..KFEQEGIGFSTDV...-PRTKQQLKMDVNYAREIIAKRAFIPNVEYELEFSHNPDDPLE-VIITKIIPVHPEVNAKIEAALK........
Q858R2_9VIRU/3-111                 ........nitgiviktfpks---.--------------GT.TI.AELNVLRPVE..TVNVE..KFAQYGLGLNTDI...-PFNKQPLRIEPTYAKRLIETRAFVPNREYDIRFGSNPDDPLE-VVAVELIPKDDDLKKYFTETLK........
A0A345N1M7_9VIRU/1-114             maiviagisitsfpesknpdv---.----------------.ER.AIIEVLYPLD..NVDSP..KYKRKAAGKTT-S...TPFGKEPIAINTAYAHLLIDNQAFVADKAYDLKFSFN--DQTFDNEVVELIPIDHEVKKHFKESL-g.......
A0A2J8GCY7_VIBDI/1-119             ....................m-AKnSVFVLGVSIFWNEFRG.EF.AQLNISRPLRplDIANDkiKMKRRTIGESGEV...S-KYDTPLTIDLNYALELERTGALVPRREYEVEISLNMDDPLSGSIVTKLIPVDPEIKKHFETSM-n.......
Q7M7D1_VIBVY/1-115                 .....................MAK.PVFVLGIDIMWNPSRG.EM.AQLNISRPLK..PVNSD..NFKRRTIGESGDV...NSKWDTPLMIDHDYALKLEKSGALVPRREYELVLELNQDDPLAGAIVTELIPVDDEIKKHFQASLK........
Q8W6E2_9VIRU/3-108                 ........nitgiviktfpks---.--------------GT.TI.AELNVLRPVE..TVNVE..KFAQYGLGLNTDI...-PFNKQPLRIEPTYAKRLIETRAFVPNREYDIRFGSNPDDPLE-VVAVELIPKDDDLKKYL-----lk......
A0A090SXC6_9VIBR/1-115             .....................MTK.AVFVLGMDITWNSARG.DS.AQLNISRPLR..EINSE..KFKRRTVGESGDV...NPQWDQPLMIDYDYATKLERTGALVPRREYELRLEINPTDPLAGAIVTELIPVDDEIKQHFQASMK........
Q7DKP8_9VIRU/1-115                 .....................MAK.SVFVLGMDITWNSARG.DS.AQLNVSRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHQYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPVDDDIKKHFEASLK........
Q64EV7_9VIRU/3-81                  ........nitgiviktfpks---.--------------GT.TI.AELNVLRPVE..TVNVE..KFAQYGLGLNTDI...-PFNKQPLRIEPSYAKRLIETRAFVPN---------------------------------------pwnmtfal
A0A1E5CM78_9VIBR/3-120             ....................t-AT.AFFVHGIKHTIFKNSGnAS.ASIYVGRALK..DFSND..NMEIKAAGYFDSIeefEKNRFKHLAIEEVYAEKVINSRAFVPYQQYELRTAPMPDNPMQSH-VVEIIPVDAEVKKHFMESMK........
A0A7X4LJR4_9VIBR/1-115             .....................MAN.SVFVLGISFVTNNFQG.DI.AQLNISRPLR..EVNTE..NYKRRTYGESGEV...NARYDQPIMIDRKYAEKLEALRVLVPRREYELELDLNPIDPLSGAIVTKLIPVDPDVKKHFADCLK........
A0A650EXI8_9VIRU/1-115             .....................MAK.SVFVLGMDITWNSARG.DS.AQLNVSRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHEYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPVDQEIKKHFEASMK........
A0A8E3XKS4_9VIRU/1-115             .....................MAK.SVFVLGMDITWNSARG.DS.AQLNVSRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHEYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPVDQEIKKHFEASMK........
A0A1W6TM33_9VIRU/1-115             .....................MAK.SVFVLGMDITWNSARG.DS.AQLNVSRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHQYALLLERTGALVPRREYQLRLEINPDDPLAGAIVTELIPVDDDIKKHFEASLK........
Q783U4_9VIRU/1-115                 .....................MAK.SVFVLGMDITWNSARG.DS.AQLNVSRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHEYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPVDQEIKKHFEASMK........
U3A3L1_9VIBR/1-115                 .....................MAK.SVFVLGMDITWNSARG.DS.AQLNISRPLR..EINAE..KFKRRTIGESGDV...NPQWDQPLMIDHEYALLLERTGALVPRREYELRLEINPEDPLSGAVVTELIPVDAEIKKHFEVSMK........
A0A2J8GMK2_VIBDI/1-115             .....................MSK.GVFVLGVDIIWNSFRG.DG.AQLNISRPLR..EINVE..KFKRRTLGESGDV...NPQFDHPIQLDYQYALKLEKTGALVPRREYELKMEINPNDPLSGAIVTELVPVDDEIKAHFKAS--gm......
R9TRB6_9CAUD/1-119                 ....................m-AKnSVFVLGVSIFWNEFRG.EF.AQLNISRPLRplDIANDkiKMKRRTIGESGEV...S-KYDTPLTIDLKYALELERTGALVPRREYEVEISLNMDDPLSGSIVTKLIPVDPEVKKHFEASM-n.......
A0A1W6UG87_9VIRU/1-115             .....................MAK.SVFVLGMDITWNSARG.DS.AQLNVSRPLR..EINSE..KFKRRTIGESGDV...NPQWDQPLMIDHQYALLLERTGALVPRREYQLRLEINPDDPLAGAIVTELIPVDDDIKKHFEASLK........
#=GC seq_cons                      ......................up.uVFVLGhshhaNp.RG.-p.AQLNVSRPL+..-lNsE..KFKRRTlGESGDV...sPpaDQPLhIDhpYAhhLEcTGALVPRREY-LRhplNP-DPLuGuIVTELIPVDsElKKHFpsShK........
//
DBGET integrated database retrieval system