GenomeNet

Database: Pfam
Entry: DUF1335
LinkDB: DUF1335
Original site: DUF1335 
#=GF ID   DUF1335
#=GF AC   PF07056.15
#=GF DE   Protein of unknown function (DUF1335)
#=GF AU   Vella Briffa B;0000-0003-4380-1783
#=GF SE   Pfam-B_10636 (release 10.0)
#=GF GA   25.00 25.00;
#=GF TC   46.20 44.90;
#=GF NC   23.00 22.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR009766;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family represents a conserved region approximately 130
#=GF CC   residues long within a number of proteins of unknown function
#=GF CC   that seem to be specific to the white spot syndrome virus
#=GF CC   (WSSV).
#=GF SQ   12
#=GS Q8VAE6_WSSVS/117-243      AC Q8VAE6.1
#=GS Q77FL4_WSSV/117-243       AC Q77FL4.1
#=GS Q77EZ6_WSSV/142-272       AC Q77EZ6.1
#=GS A0A2U9G8Y1_WSSV/140-270   AC A0A2U9G8Y1.1
#=GS Q77J47_WSSVS/140-270      AC Q77J47.1
#=GS Q8QTG6_WSSV/125-255       AC Q8QTG6.1
#=GS A0A0A0Y8Z9_WSSVS/122-241  AC A0A0A0Y8Z9.1
#=GS Q8VAC8_WSSVS/147-277      AC Q8VAC8.1
#=GS Q8VAY4_WSSVS/142-272      AC Q8VAY4.1
#=GS Q77IY9_WSSVS/125-255      AC Q77IY9.1
#=GS A0A2U9GA14_WSSV/122-241   AC A0A2U9GA14.1
#=GS Q8QTH3_WSSV/16-146        AC Q8QTH3.1
Q8VAE6_WSSVS/117-243                 ....DKSFTFSPLYRILTDRLFNAAIHNCKYIIVTADLLMGCGITNNKVEKKLLSMGSIL----GGESMVPLHDIAHRLSYKGLRIENPIVGSCHDQCLVVPVSMLGKIFSSNMYPTFKNFDQCMALFLNAVVTH......................
Q77FL4_WSSV/117-243                  ....DKSFTFSPLYRILTDRLFNAAIHNCKYIIVTADLLMGCGITNNKVEKKLLSMGSIL----GGESMVPLHDIAHRLSYKGLRIENPIVGSCHDQCLVVPVSMLGKIFSSNMYPTFKNFDQCMALFLNAVVTH......................
Q77EZ6_WSSV/142-272                  ...f-RGFYFSPTYRYITKSLPQIPFGEKERFVVSTDFLIGLGFSADDVMEKLIAIEGNMRKSGLKYTWVPVAEVCHLKKYKGDIVVNPIFKSYHSHCLVIPLVYLGYMFSRNVQPPSLEVETYLLALAFAIDLY......................
A0A2U9G8Y1_WSSV/140-270              ....DKDFKFSQLYRYMSNSLSEAVEKKHDCMIISSDFLIGLGFSTMNVTHALKSMERTMQKHGFKDMMVPLVEICHRTHYKGEYIANPIFKSHSSHCLIVPLFMVAGVFARSAHPSAASIEMYLSTLAYAVILY......................
Q77J47_WSSVS/140-270                 ....DKDFKFSQLYRYMSNSLSEAVEKKHDCMIISSDFLIGLGFSTMNVTHALKSMERTMQKHGFKDMMVPLVEICHRTHYKGEYIANPIFKSHSSHCLIVPLFMVAGVFARSAHPSAASIEMYLSTLAYAVILY......................
Q8QTG6_WSSV/125-255                  ....DKNFKFSPLYRIIHERLSNAAVKKCDYMIITTDFLVGCGFSPRNCTRTLKNMEQVLVQHGGTSSRVSVYDICDRLTYNGLSIANPIVGSFSNMCLIVPMDKLGLLFYNSTHPSAKSIGNYMSCLFNAAVVY......................
A0A0A0Y8Z9_WSSVS/122-241             gdis-----SSPLYTQIMKHISPEHDIYELDLIVGTDLLFGLGVNLRNVSKLMKKI---------SYGTLNVVDVCHRKFFNNRIIVNPISSSFSKNVCIIPLFSAAEEFSS-----------------------lgecrdlfngicddveryinsy
Q8VAC8_WSSVS/147-277                 ....DKNFKFSPLYRLLHERLSNAAVKKCDYMIITTDFLVGCGYTPSHCPRTLRNMEQLLVEQCGFSSRISVYDICDRLTYKGAYIANPITGSYSNMCLIVPMDKLGLIFYNSTHPSAKSIGNYMSSLFNATVIY......................
Q8VAY4_WSSVS/142-272                 ...f-RGFYFSPTYRYITKSLPQIPFGEKERFVVSTDFLIGLGFSADDVMEKLIAIEGNMRKSGLKYTWVPVAEVCHLKKYKGDIVVNPIFKSYHSHCLVIPLVYLGYMFSRNVQPPSLEVETYLLALAFAIDLY......................
Q77IY9_WSSVS/125-255                 ....DKNFKFSPLYRIIHERLSNAAVKKCDYMIITTDFLVGCGFSPRNCTRTLKNMEQVLVQHGGTSSRVSVYDICDRLTYNGLSIANPIVGSFSNMCLIVPMDKLGLLFYNSTHPSAKSIGNYMSCLFNAAVVY......................
A0A2U9GA14_WSSV/122-241              gdis-----SSPLYTQIMKHISPEHDIYELDLIVGTDLLFGLGVNLRNVSKLMKKI---------SYGTLNVVDVCHRKFFNNRIIVNPISSSFSKNVCIIPLFSAAEEFSS-----------------------lgecrdlfngicddveryinsy
Q8QTH3_WSSV/16-146                   ....DKNFKFSPLYRLLHERLSNAAVKKCDYMIITTDFLVGCGYTPSHCPRTLRNMEQLLVEQCGFSSRISVYDICDRLTYKGAYIANPITGSYSNMCLIVPMDKLGLIFYNSTHPSAKSIGNYMSSLFNATVIY......................
#=GC seq_cons                        ....DKsFpFSPLYRhlpc+LSsAsh+cp-hhIloTDFLlGhGaospsVs+pL+sMEphh.ppshppohVsVhDICHRhpYKGthIsNPIsuSaSspCLIVPlshLGhlFusssaPoutsltpYhusLh.AsllY......................
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