GenomeNet

Database: Pfam
Entry: DUF1589
LinkDB: DUF1589
Original site: DUF1589 
#=GF ID   DUF1589
#=GF AC   PF07628.15
#=GF DE   Protein of unknown function (DUF1589)
#=GF AU   Studholme DJ;0000-0002-3010-6637
#=GF SE   Blast clustering of Pirellula proteome
#=GF GA   21.00 21.00;
#=GF TC   21.60 21.40;
#=GF NC   20.70 20.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR011480;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   A family of short hypothetical proteins in Rhodopirellula
#=GF CC   baltica.
#=GF SQ   14
#=GS Q7UZE3_RHOBA/1-164   AC Q7UZE3.1
#=GS Q7UP80_RHOBA/39-87   AC Q7UP80.1
#=GS Q7UZE5_RHOBA/1-164   AC Q7UZE5.1
#=GS Q7UHZ8_RHOBA/36-122  AC Q7UHZ8.1
#=GS Q7UJJ5_RHOBA/1-77    AC Q7UJJ5.1
#=GS Q7UZE2_RHOBA/4-79    AC Q7UZE2.1
#=GS Q7UJJ6_RHOBA/1-56    AC Q7UJJ6.1
#=GS Q7UHY2_RHOBA/9-82    AC Q7UHY2.1
#=GS Q7UZE4_RHOBA/1-164   AC Q7UZE4.1
#=GS Q7UP78_RHOBA/1-95    AC Q7UP78.1
#=GS Q7UJK2_RHOBA/31-86   AC Q7UJK2.1
#=GS Q7UJK4_RHOBA/1-42    AC Q7UJK4.1
#=GS Q7UWY3_RHOBA/49-130  AC Q7UWY3.1
#=GS Q7UJ44_RHOBA/40-101  AC Q7UJ44.1
Q7UZE3_RHOBA/1-164              ........................MLWNRASRPAGHARLSDVRPFT....QPGTTWPTS.LSQPDASAR..DTS..EFWRSHQ...R..RQGHYLAPSRCFGTKRAVQ.PVT.QGSAM...SVHSPRQVQPGLHFCPNPTRQRRTRLNTGEATNVGQVITWHPADALEQSGPSS.RSRKTQRCPSIHPARYNLAYIF.VPTRRVSERHV...............
Q7UP80_RHOBA/39-87              ....................lpps----------------------....---------.---------..---..-------...-..RPGYYLAPSRCFGTKRGVRsPHQ.QPHKP...TGHSPRHVEHGLH----------------------------------------.----------------------.-----------rrrl...........
Q7UZE5_RHOBA/1-164              ........................MLWNKAGRPAGHARLSDVRPFT....PPGTTWPTY.LSQPDASAR..DTS..EFWRSHQ...R..RPGHYLAPSRRFGTKRAVQ.PVT.QDSAM...SVHSPRQVQPGLHICPNPTRQRETRLNSGEATNVGQVITWHPADALEQSEPSS.RSRKTQRCPSIHPARYNLDYIS.VPTRRVSEGHV...............
Q7UHZ8_RHOBA/36-122             setvatsptsncqfampslqfafl----------------------....---------.---------..---..------P...R..RPCCTWQPSRCFGTKRGVI.RMPsQAQHS...PARNHRQVEPGLRLWPFPTSPN-------------------------------.----------------------.-----------heknptrcagf....
Q7UJJ5_RHOBA/1-77               ........................MLWNKARRPTTPARPSDVRPIT....PPGTTWPTTpPSQPAALAR..PPAilSCHREHR..vH..REPHKLKP-----------.---.-----...-----------------------------------------------------.----------------------.-----------hpshpqhnlralcd.
Q7UZE2_RHOBA/4-79               .................qvrrnei----------------------....---------.---------..---..-------...-..-------------------.---.-----...-----------------PTRPRGTRLNFGEATNVGQVITWHPADALEQSEPSS.RSRKTQRCSSIHPARYNLAYIS.VPTRRVSERHV...............
Q7UJJ6_RHOBA/1-56               ........................MLWNKARRPTTPARPNAVRPIT....PPGTTWPTTpPSQPAALARppHRT..NSWRIRL...R..-------------------.---.-----...-----------------------------------------------------.----------------------.-----------np.............
Q7UHY2_RHOBA/9-82               yaaevtantsnspfamsilqfaiv----------------------....---------.---------..---..------P...R..RPCYTWQPSRCFGTKRGVQsPFS.QAQPP...PAKTQRQVEPGLR----------------------------------------.----------------------.-----------tpltnla........
Q7UZE4_RHOBA/1-164              ........................MLWNKASRPAGHARLSDVRPFT....PPGTTWPTF.LSQPDASAK..DTS..EYWRSHQ...R..RPGHYLAPSRCFGTKRAVQ.PVT.QDSAM...SVHSPRQVQPGLHICPNPTRQRETRLNSGEATNVGQVITWHPADALEQSGPSS.RSRKTQRCPSIHPARYNLAYIF.VPTRRVSERHV...............
Q7UP78_RHOBA/1-95               ........................MLWNKARRPITSPASSKLASHSprhvKHGLHTRRF.VG-GNQKAK..LTI..SNCKLQTnlpRpgRPGYYLAPSRCFGTKRGVQ.SP-.-----...-----------------------------------------------------.----------------------.-----------hrqapnlpaihhams
Q7UJK2_RHOBA/31-86              ....................sges----------------------....---------.---------..---..----SDN...R..RPGYYLAPSRCFETKRGVQ.PHP.QDPTR...SVQSPRQVQPGLR----------------------------------------.----------------------.-----------rprhnppr.......
Q7UJK4_RHOBA/1-42               .......................m----------------------....---------.---------..---..-------...-..-------------------.---.-----...----------------------------------------------KQSEASN.HTRKTQRGPSNHPARYNLAYDApVTTRRVSK---atr............
Q7UWY3_RHOBA/49-130             ....................phhp----------------------....---------.---------..---..------T...R..RPCFTWRPNRCFGTKRGVF.EAG.HANDMvnaSASNHRQVKPGLHLH------RV-------VPLVGHVPHGNPADALEQSEAES.R---------------------.-----------qvipt..........
Q7UJ44_RHOBA/40-101             .....................iaa----------------------....---------.---------..---..-------...-..-------------------.---.-----...-----------------PTRSRI-HQNSVHA-PVGHVPHGAHADALEQSEASSkRSRESNLHRQGTIARYNLAY--.-----------nrrs...........
#=GC seq_cons                   ......................................................................................R..R.sahhtPsRpFtTKRuV......................................................................................................p..............
//
DBGET integrated database retrieval system