#=GF ID   DUF1948
#=GF AC   PF09185.14
#=GF DE   Domain of unknown function (DUF1948)
#=GF AU   Sammut SJ;0000-0003-4472-904X
#=GF SE   pdb_1q8c
#=GF GA   25.00 25.00;
#=GF TC   26.00 33.10;
#=GF NC   23.90 24.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF CL   CL0633
#=GF RN   [1]
#=GF RM   15146506
#=GF RT   A conserved hypothetical protein from Mycoplasma genitalium
#=GF RT   shows structural homology to nusb proteins. 
#=GF RA   Liu J, Yokota H, Kim R, Kim SH; 
#=GF RL   Proteins. 2004;55:1082-1086.
#=GF DR   INTERPRO; IPR015268;
#=GF DR   SCOP; 1q8c; fa;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   Members of this family of Mycoplasma hypothetical proteins adopt
#=GF CC   a helical structure, with one central alpha-helix surrounded by
#=GF CC   five others, in a NusB-like fold. Their function has not, as
#=GF CC   yet, been determined [1].
#=GF SQ   3
#=GS Y030_MYCPN/29-168       AC P75084.1
#=GS A0A292IHI6_9MOLU/4-129  AC A0A292IHI6.1
#=GS Y027_MYCGE/12-151       AC P47273.1
Y030_MYCPN/29-168                  .................................................LTRTQRRIAIVEFIFATLFFLPKTADQIQAAFLDYDVPERPLNDWQKEIVKVFSERCVEFIELIENQQQRNQAEVQSKYNKVSGKKVDLLTKAVILCALSEQHAQATDKPLLISEALLIMDHYSQVPEKKQTHALLDKLL.
A0A292IHI6_9MOLU/4-129             .............................................qiwa-----KRVAVFEYIFSCLAKNEQDPKTIINELKTF----PDIDPWQIKIVTYFSYNLNKTIAKIQALT---------TKSKWSYEQMDLILKAIIHEVYNERLAHKTDKAILIDQSLITMDHYGEPKLKKILHAIIDKI-i
Y027_MYCGE/12-151                  .................................................LTRTQRRIAVVEFIFSLLFFLPKEAEVIQADFLEYDTKERQLNEWQKLIVKAFSENIFSFQKKIEEQQLKNQLEIQTKYNKISGKKIDLLTTAVVLCALSEQKAHNTDKPLLISEALLIMDHYSQGAEKKQTHALLDKLL.
#=GC seq_cons                      .................................................LTRTQRRIAVVEFIFSsLFFLPK-A-sIQA-FL-YDs.ERsLN-WQKcIVKsFSENlscFIcKIEsQQ.+NQhElQoKYNKlSGKKlDLLTKAVILCALSEQ+AHsTDKPLLISEALLIMDHYSQssEKKQTHALLDKLL.
//