GenomeNet

Database: Pfam
Entry: DUF276
LinkDB: DUF276
Original site: DUF276 
#=GF ID   DUF276
#=GF AC   PF03434.17
#=GF DE   DUF276 
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   Pfam-B_4450 (release 6.6)
#=GF GA   25.00 25.00;
#=GF TC   31.60 316.10;
#=GF NC   24.70 24.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR005096;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family is specific to Borrelia burgdorferi.  The protein is
#=GF CC   encoded on extra-chromosomal DNA.                  This domain
#=GF CC   has no known function.
#=GF SQ   12
#=GS Q9S046_BORBU/1-290  AC Q9S046.1
#=GS W6TGB8_9SPIR/1-291  AC W6TGB8.1
#=GS Q9S088_BORBU/1-290  AC Q9S088.1
#=GS Q9S0F2_BORBU/1-290  AC Q9S0F2.1
#=GS W6TWL7_9SPIR/1-291  AC W6TWL7.1
#=GS W6TXY9_9SPIR/1-285  AC W6TXY9.1
#=GS O50903_BORBU/1-289  AC O50903.1
#=GS Q9S0C3_BORBU/1-290  AC Q9S0C3.1
#=GS Q9S071_BORBU/1-290  AC Q9S071.1
#=GS Q9R331_BORBU/1-290  AC Q9R331.1
#=GS Q9RZZ5_BORBU/1-290  AC Q9RZZ5.1
#=GS W6TH24_9SPIR/1-290  AC W6TH24.1
Q9S046_BORBU/1-290             MSIVFDSDFGILKRTIKDIVRSKREYLRVNYGINIDDNQSSIYNIIASSLALIEEEIINELNLFFSKMKPGGTYWAAIEEHISS-KSTTYSAVRTALLNLDEVEYTNIKSAAGKANIYLILKETLLDTSKSNINSSEFKAKLWETLYLTTPSGTLLEGDIEIDGLNSTGQRKSYKISLGKRKYVYMKVKYKLDLKNYLYLNIDSQIRDIYSRIILNNYSDMGISFEYQDFFAPVNEVKGIKFMEISACIKDTDTESITKIGDSDFKKNQDIAINDDTMLLFN.TTDRLLIDI
W6TGB8_9SPIR/1-291             MSILFDSDVGVLKKNIEQIVNAKRQYLRDNYKILINDDPASIYNIIATSLAFKECELIDEVNKLFQSIKPDSEYWQAIEKHISV-KSTTYEAIKNSLLSINGITHANIKSTAGTASIYVIVDDEFMNSEKTQIEDTNLKANIWNILYLTCPIGTTFEGDIIIDGINNNNQRIEYKVSLGKKKYVYLKSKYKVNVKNHLYLNVDAKIRDIYTRIANNNYGDMGISFEYQDFFAPVNEVKGVHCIDVSVALKENLNTKINEINDSEFKNNENIQVEENEILDFDfTSDRLLINI
Q9S088_BORBU/1-290             MSIVFDSDFGILKRTIKDIVRAKREYLRVNYGINIDDNQSSIYNIIASSLALIEEEIINELNLFFSKMKPGGTYWAAIEEHISS-KSTTYSAVRNALLNLEGVEYTNIKSAAGKANIYLILKETLLDASKSTINSSEFKAKLWETLYLTTPSGTLLEGDIEIDGLNSTGQRKSYKISLGKRKYVYMKVKYKLDLKNYLYLNIDSQIRDIYSRIISNNYSDMGISFEYQDFFAPVNEVKGIKFMEISACIKDTDTESIAKITDSDFKKNQDITITDDTMLLFN.TTDRLLIDI
Q9S0F2_BORBU/1-290             MSIVFDSDFGILKRTIKDIVRSKREYLRVNYGINIDDNQSSIYNIIASSLALIEEEIINELNLFFSKMKPGGTYWAAIEEHISS-KSTTYSAVRTALLNLDGVEYTNIKSAAGKANIYLILKETLLDDSKSNINSPEFKAKLWETLYLTTPSGTLLEGDIEIDGLNSTGQRKSYKISLGKRKYVYMKVKYKLDLKNYLYLNIDSQIRDIYSRIISNNYSDMGISFEYQDFFAPVNEVKGIKFMEISACIKDTDTESITKIGDSDFKKNQDIAINDDTMLLFN.MTDRLLIDI
W6TWL7_9SPIR/1-291             MSILFDSDVGVLKKNIEQIVNAKRQYLRNNYKILINDDPASIYNIIATSLAFKECELIDEVNRLFESIKPDSKYWQAIEKHISV-KSTTYEAIKNSLLSINGITHANIKSTAGTASIYVIVDDEFMNSDKTQIEDTNLKANIWNILYLTCPIGTTFEGDIIIDGINNNNQRIEYKVSLGKKKYVYLKSKYKVNVKNHLYLNVDAKIRDIYTRIANNNYGDMGISFEYQDFFAPVNEIKGVHCIDVSVVLKENLNTKINEINDSEFKNNENIQVEENEILDFDfTSDRLLINI
W6TXY9_9SPIR/1-285             MRIVFDKETGIITKSIEEIQNTKKEILKREYNILIKDN--SIFDIINYPSSAIDMEIIQALNELFETLKEGGKYFKKLQHSLSIHKSSTYEAVKQALLAIPQIEYANIISSAGTIQIHIIFTKEYR---TLSAITQDIKIQIWKAIYNTAPCGTAFRGKIKLEFLNKNGQQKTYKFSLGIIKYAYLKVLYKTET-ESIHKEIDENIREIYKKIFQNKYKDMGISFCYQDLLGPVSLLQGIRKMKIGIHTKENLNTKITEIKESEFQFNNDIEIKANELISFD.ENSRLIIER
O50903_BORBU/1-289             MSIIFDKNLGILEKTIEEIQNEKKHILRTKYGINIKDN--SIYDIINFPSSSIDKQISEVLKELFSKIKENGSYFNALKEDLSTPKSSTYEAIRKALLNVEGVKHINILSGPGTINLYLILQDDCFQDQEKKQIKIETKQNIWQAIYYTAPSGTVFKGDIEIEFLNKHNQKKTYKFSLGKKKYAYLKVVYKTEAKDAIYKEIDTQIRDIYNKILTDKYIEMGTSLRYQDFLAPVSIIRGIKELKIGICIKNDETKKITQLSDSDFTFNKDENTKEDEIIIFN.TNKRLLINR
Q9S0C3_BORBU/1-290             MSIVFDSDFGILKRTIKDIVRSKREYLRVNYGINIDDNQSSIYNIIASSLALIEEEIINELNLFFSKMKPGGTYWAAIEEHISS-KSTTYSAVRTALLNLDGVEHTNIKSAAGKANIYLILKETLLDDSKSNINSPKFKAKLWETLYLTTPSGTLLEGDIEIDGLNSTGQRKSYKISLGKRKYVYMKVKYKLDLKNYLYLNIDSQIRDIYSRIISNNYSDMGISFEYQDFFAPVNEVKGIKFMEISACIKDTDTESITKIGDSDFKKNQDIAINDDTMLLFN.MTDRLLIDI
Q9S071_BORBU/1-290             MSIVFDSDFGILKRTIKDIVRSKREYLRVNYGINIDDNQSSIYNIIASSLALIEEEIIDELNLFFSKMKPGGTYWAAIEEHISS-KSTTYSAVRTALLNLDGIEYTNIKSAAGKANIYLILKETLLDTSKSNINSPEFKAKLWETLYLTTPSGTLLEGDIEIDGLNSTGQRKSYKISLGKRKYVYMKVKYKLDLKNYLYLNIDSQIRDIYSRIISNNYSDMGISFEYQDFFAPVNEVKGIKFMEISACIKDTDTESITKIGDSDFKKNQDIAINDDTMLLFN.MTDRLLIDI
Q9R331_BORBU/1-290             MSIVFDSDFGILKRTIKDIVRAKREYLRVNYGINIDDNQSSIYNIIASSLALIEEEIINELNLFFSKMKPGGTYWAAIEEHISS-KSTTYSAVRNALLNLDGIEYTNIKSAAGKANIYLILKETLLDTSKSNINSPEFKAKLWETLYLTTPSGTLLEGDIEIDGLNSTGQRKSYKISLGKRKYVYMKVKYKLDLKNYLYLNIDSQIRDIYSRIISNNYSDMGISFEYQDFFAPVNEVKGIKFMEISACIKDTDTESITKIGDSDFKKNQDIAINDDTMLLFN.MTDRLLIDI
Q9RZZ5_BORBU/1-290             MSIVFDSDFGILKRTIKDIVRSKREYLRVNYGINIDDNQSSIYNIIASSLALIEEEIINKLNLFFSKMKPGGTYWAAIEEHISS-KSTTYSAVRTALLNLDGVEHTNIKSAAGKANIYLILKETLLDDSKSNINSPKFKAKLWETLYLTTPSGTLLEGDIEIDGLNSTGQRKSYKISLGKRKYVYMKVKYKLDLKNYLYLNIDSQIRDIYSRIISNNYSDMGISFEYQDFFAPVNEVKGIKFMEISACIKDTDTESITKIGDSDFKKNQDIAINDDTMLLFN.MTDRLLIDI
W6TH24_9SPIR/1-290             MSILFDSDFGILKQNIKQIVETKRENLRNMHRIVINDDPTSIYNIIATSLAIIEEQIINEVNILFSKISPGGEYFKAIEDHISI-KSTTFNAVHKALTSIDGIEYANIISTAGKANIYLILNESLLDSTKTNIINSDFKAKLWETLYKTIPSGTILEGNINIDGLNQQNQLKSYKVSLGVRKYVYLKVKYQLDLQNHIYLNIDSRIRDIYTRIVNNNYTNMGIKFEYQDFFAPVNEIKGIKGLKIFAVLKDDDKTQIANINDSEFKENQDIDVKPEELLIFN.LADNLFIDI
#=GC seq_cons                  MSIVFDSDFGILK+TIK-IVcuKREYLRsNYGINIcDN.oSIYNIIAoSLAlIEEEIIsELNlhFSKhKPGGoYWsAIEEHISo.KSTTYsAVRsALLNl-GlEasNIKSuAGKANIYLILcEoLLDsoKosIpos-FKAKLWETLYLTsPSGTlLEGDIEIDGLNssGQRKSYKlSLGKRKYVYhKVKYKLDLKNaLYLNIDSQIRDIYoRIlsNNYoDMGISFEYQDFFAPVNEVKGIKhM-ISACIKDsDTcpITcIsDSDFKcNQDIsIp-DphLlFN.hoDRLLIDI
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