GenomeNet

Database: Pfam
Entry: DUF3514
LinkDB: DUF3514
Original site: DUF3514 
#=GF ID   DUF3514
#=GF AC   PF12027.12
#=GF DE   Protein of unknown function (DUF3514)
#=GF AU   Assefa S;0000-0003-2178-533X
#=GF AU   Coggill P;0000-0001-5731-1588
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   PFAM-B_3570 (release 23.0)
#=GF GA   25.00 25.00;
#=GF TC   27.00 35.50;
#=GF NC   21.60 20.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR021902;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of proteins is functionally uncharacterised. This
#=GF CC   protein is found in bacteria. Proteins in this family are
#=GF CC   typically between 368 to 823 amino acids in length.
#=GF SQ   16
#=GS Q2GHZ9_EHRCR/432-681  AC Q2GHZ9.1
#=GS Q2GHY9_EHRCR/77-333   AC Q2GHY9.1
#=GS Q3YT39_EHRCJ/313-564  AC Q3YT39.1
#=GS Q2GHY6_EHRCR/27-283   AC Q2GHY6.1
#=GS Q3YT32_EHRCJ/624-881  AC Q3YT32.1
#=GS Q2GHZ7_EHRCR/535-791  AC Q2GHZ7.1
#=GS Q3YT36_EHRCJ/354-589  AC Q3YT36.1
#=GS Q3YT33_EHRCJ/351-608  AC Q3YT33.1
#=GS Q3YT40_EHRCJ/4-196    AC Q3YT40.1
#=GS Q3YT37_EHRCJ/411-663  AC Q3YT37.1
#=GS Q2GI02_EHRCR/1-61     AC Q2GI02.1
#=GS Q2GI03_EHRCR/2-61     AC Q2GI03.1
#=GS Q3YT38_EHRCJ/603-855  AC Q3YT38.1
#=GS Q2GHZ2_EHRCR/501-760  AC Q2GHZ2.1
#=GS Q2GHY4_EHRCR/77-332   AC Q2GHY4.1
#=GS Q3YT35_EHRCJ/532-789  AC Q3YT35.1
Q2GHZ9_EHRCR/432-681             ....................................RLKKDLLSFIGNRIENPEFCILIFKVACLGHCMSVTNIIKFYHSLFYN---EIDDQVLEECVQDIVIYAQDT--ELSITKIAGVFSNSYTSYVS.KNTVPHPPGFYRHVLRLLCNLVSARVSDPE..cPVDVLDCVIVCAAQLLGTVY..-N..NYKSFTKMQGVN..IDNMSFFSVVE.......NMGSTRHCCGQLGLVCYGLLNCMTYMYSVNDN.-GVKNVGGLAMPKIVVERCSEHFYGVVERNMASGNMGFHVIMGDCAAR.VCAAVDR.......
Q2GHY9_EHRCR/77-333              ....................................MFKPEVEQFLLGITSNMKLCTFVIKIGIVEHVMSRICRFYGSDSIKYCASHYRDPKFIDSILVILHDASHFDFSTMSYQVRNSMANCVRRYNIT.SVYELHDSSFYSELLSMCYDFVRAKSNQSV..qFQELCDFIKLSSTVQLAQMY..HM..ILKTKCSTGNEQ..DNLQGLLLQER.......NIESLIYSSVFFGKYACRVRKAFRHLYAPSDK.NPVRTVSGLNIPYVMIQLNSKGIFAEIEHCVNAEKMDFNVFVRDIVRY.INKLLS-y......
Q3YT39_EHRCJ/313-564             ..................................hv--NKNVDDFLKSKVIDHAMLVFVLKLGCLMNCVAILGKNNFFSSLAYDAQLYWDKSVLNTLLKKLLASISA--AQISIPVVNFHFSQLLNQGD-.--QAAHSGTFYRRVLSVLCQLVRLRLCDPScenQHNMLDLGIVSCAMIMGTMY..-K..QYISMLHFSGDV..NGHPSFSQVIT.......CMGPQRPHRGVFARLCVTILCKLSGMNNLKYN.-KAVLFNSLYMPGGLIANASEHFLGKITQCINNNEMFFGVIIEDLSMQ.VCMMLDR.......
Q2GHY6_EHRCR/27-283              ....................................MLKPEIEQCLLGITSNMKLCTFVIKIGIVEHVMSRICRMYGSDSIKYCASHYRDPKFIDSILVILHDASHFDFSTMSYQVRNSMANCVREYKIT.NVYELHDSSFYSELLSMYYDFVRAKSNQSV..qFQELCDFIKLSSTVQLAQMY..HM..ILKTKCSTGNEQ..DNLQELLLQER.......GIGHLIYSSVFFGKYACRVRNAFRHLYSPDDK.NPIHTISGLNVPYCVIRISSRKIIPKVESCIKANKMDFSVFVDDIVHF.VKDTLYR.......
Q3YT32_EHRCJ/624-881             ....................................VLKPEIQNSLLKVTNNINLCTFIIKFGIIKQMVGRLCNLVILKYFKYCASHYYDQSHMDAFLISLINLGFSDLKTISARVCNFLYCYSQELKDK.AVFKVHSDSFYYDMLGMYIDIVNSRVQDTQ...LNDLIDLIKVSCIVQFGHMY..HIivQSKSITTESCTD..KEIQALIFQER.......SVKHMLFYAVRFARICDNARMAFSHLYSPDEKrNPVCVTSGLAFPRNIIRPC-REIINDIDHNVKNGTMHFGVFMSNIANY.TTSL---fln....
Q2GHZ7_EHRCR/535-791             ....................................LLKPEIRDLLLKITNNIDLCTFLMKMVMLDHLMSRLCKFYVSDSLKYCASHFRNPSLVDNLLIQILSKKRIDCITMSQELRYNLAMCTKGYDA-.EVFELHDSIFYSEVLSLYCEFMHASVDDEQ...SKTLCSLVELSCALQFGQMYhvLG..KSKHMVVEGMNI..EKMEKDLSEGK.......DVKQFIFRARIFGGYCYAMRKALRHMYIPTDK.NTACAVAGLNVPSRMLKVCSKDIAEIIDDHVKRNKMDFSVFVNNMVSS.VKRFMV-n......
Q3YT36_EHRCJ/354-589             ...................................l-LRNNIMNFLVHEVSNYQLCSFVLRLYSVLHCTLLLNRYKFCDKLIYN--RYITTSALDMCIVDLLANIQNT--SMSFYRLKEIIHYHHVQKFP.TVMGYYSSNFFSDILKLLRNLSSVKPGSTN..ySRRVLNFAIVSCAMILGSMY..--..-SKIEVVTSK--..----------A.......RVGEGKH-TEVFGLMCYYVLYKMQYMYDVDSN.-VTVVIGNLCFPSLLVEQCSVNFLDIAKVKIANDNMSFDVIMNDLANN.ICLLMT-k......
Q3YT33_EHRCJ/351-608             ...................................i-FRDEIQNVLLKTTKNIELCSFVIKQGIIMQVMSRVCSSKLYNSVMYCASHWDNQKILDAVLLEILNLGPNALVSMLPSMRN-VFLNMHEGIEH.NVFRLYSGGFYSGLLNMCYDFITQIDKSPG...LMRLYNFIILSSQIHFGTMY..DV..ICKSQVTAAGVQnvEAIKKLIFNGH.......RVGSVQICPTIFVHRCCGVKRTFRHLYSPNYK.NVACTIGNLNIPSVIIKECSCNIDEKVAQCIEEKTMSFDVFVEDMVCNcVKSLL--yq.....
Q3YT40_EHRCJ/4-196               kilkkflvhveksqlnesiinfyfchllseddnavy----------------------------------------------------------------------------------------------.------SGRFYKRVLSTLCQLVRLRLCDPDcveQHDVLNLGIVSCAMIMGTMY..-K..QYISLQHFSGDV..KGYPSFSQVVT.......CMGPQRHHRGVFAQLCVTILCKICGLNNLQYN.-EAVLFNGLYMPGGLITNASEHFLGKITQCINNNEMFFGVVIEDLATQ.VCMMLDR.......
Q3YT37_EHRCJ/411-663             ..............................lyvtdn------TEVLLRNLQNPTLCVLVLKLCFALYCTIPLARQGFCDTVVYN-TRICGKNLLDMLLVKVYNGVQHE--GFKFRPIRQILYCQYLNKLSfSNVVLHDGDFFLGIYSLLCELSYLRVNSIL..rSHDILDFAIVGCAIMCGSMY..-D..NYGFLINNKTSI..DEEHNIMYLVE.......HMGSTGPQRGAFGQMCYDLLCQVRYMYNAGN-.NQLTKLHNMLFPRALIEQCSPGFRERAEEHVAGGTMSFNLIITDIASR.ICRMMDR.......
Q2GI02_EHRCR/1-61                ....................................----------------------------------------------------------------------------------------------.------------------------------...--------------------..--..------------..-----------.......-------------------------MYSINDD.-GVICVDSIPLPRITLERCDENFAARVQQSIVDNSMNFSVLIEDLASR.VVH----niic...
Q2GI03_EHRCR/2-61                .................................kfg----------------------------------------------------------------------------------------------.---RVHHIGFYRQLFQMLCNLISLRSSDPE..fSTEILDLAMVSVSMMLSTMC..-N..NYR---------..-----------.......--------------------------------.------------------------------------------------.-------cllne..
Q3YT38_EHRCJ/603-855             ..................................yt--KYDLLSFLRLNIQNYELCVFLLKLSYVLNCTIVIRQPTFAKNLVYNASFFHEPSILCDCIGKLFSSVQSG--YTSIEVMHKILCSYHVKRFP.QNSTLYSGAFFSELLKILGHLVSIRLSEPN..yLNKILDFAIVNCSMMLGSMY..-S..NYRYLTGIKGMI..ADEATFNMLVD.......HMGSTGSCKGKLGLMCYRVLCNILYMYNGDYN.NDVL-ICGMYLPERVVKQCSQYFSDKIVNNVVNNTMGFHVIMEDISML.ICSMID-r......
Q2GHZ2_EHRCR/501-760             ....................................VLKPEIEQFLLKTTSNIKLCTFIIKIGIVDQVMARLGNSYGCNSIKYCASYYHDSEIIDEILIRFYGTSYSSFSEVSQQVRHDTVDCLKKRNVT.NVFKLHDSSFYSEVLSVCCNFMGVSNKDIE...LHKLCSFVQLSCCIQIAQMY..HM..ML--KVKYSAGD..KQDYAQQCISErla.kgpAIKDFMYRALLFGRCACNVRNTFRHLYSPDDK.NHIRTVSGLNVPYCMIRVSSKGIIPKIESYIKRNKMDFGVFVDDIVNF.VRDALYR.......
Q2GHY4_EHRCR/77-332              ....................................MLKSEIEQCLSKITSNIRLCAFVIKIGIVDHVMSRLCRFYGSDSIKYCASHYHDPRVIDSILIGLYGASYSDFSRMSYQVRSNIVYCVGKHGIA.GVFKLHNSGFYSELLGMCYDFVHARGKGVK...LQELCDFMKLSCSIQLGQMY..HM..MVKVKCSIGDEQ..SDIRKLVSQEC.......SVGYLVYRSLLFGRYAYHVRKAFRHLYAPSDK.NPVRTVSGLNIPHSLIRLNHRGIFTKIEHCINAEKMSFNVFVVDIVRH.IDKLLL-h......
Q3YT35_EHRCJ/532-789             ...................................l-LRKGIISFIKRVIPNRKICTFIFKLAYMLNCMEMVNRPDVANSMICNLLLYSNQSLLDENLVQIVQCVQSG-ANVEEASKVLHGCCFKMANC-.-DHEFYDGEFFRNVLDVFQKLMLFRLVGAN..cPKKVLDLVIVKCAMIIGTMY..-T..GYRCFIKSQGGF..SDDESIAAIIEhmyggggDA-KTKPHAGRVGVICCNMLVNLMNMYDPESN.-GIVQISGICFPEKLICQCSEHLSNEIERNMAEGTMGYEVIMENLAMC.-------lystien
#=GC seq_cons                    .....................................h+.pl.phLhphhpNhpLCsFllKluhl.pshthlsp.hh.solhYshphahs.phlDthLlplhsts.ts..phS.phhp.hh.sht..th..tshplHsusFYpclLshhtphlph+ssssp....pclhDhshlSCuh.hGpMY...h...h+.hsphust...pp..ph....c.......shtphhhpsshFGthChplhpshpahYssssp..slhsluGLshPptlIc.sScphhsclcpslssspMsFsVhlpDlspp.lsphh.........
//
DBGET integrated database retrieval system