GenomeNet

Database: Pfam
Entry: DUF3908
LinkDB: DUF3908
Original site: DUF3908 
#=GF ID   DUF3908
#=GF AC   PF13048.10
#=GF DE   Protein of unknown function (DUF3908)
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF AU   Aldam G;0000-0003-3039-8438
#=GF SE   Pfam-B_1533 (release 24.0)
#=GF GA   22.90 22.80;
#=GF TC   24.00 23.00;
#=GF NC   21.50 20.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF CL   CL0123
#=GF DR   INTERPRO; IPR025020;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of proteins is functionally uncharacterised. This
#=GF CC   family of proteins is found in bacteria and viruses. Proteins in
#=GF CC   this family are approximately 140 amino acids in length. There
#=GF CC   is a single completely conserved residue Y that may be
#=GF CC   functionally important.
#=GF SQ   21
#=GS A0A8J7KT84_9FIRM/4-132   AC A0A8J7KT84.1
#=GS I8AHS9_9BACI/6-132       AC I8AHS9.1
#=GS A0A1M6HK46_9CLOT/4-134   AC A0A1M6HK46.1
#=GS A0A3A9JLU5_9THEO/40-170  AC A0A3A9JLU5.1
#=GS A0A1M4N8L1_9CLOT/4-134   AC A0A1M4N8L1.1
#=GS Q0H267_9CAUD/69-197      AC Q0H267.1
#=GS I7J696_BABMR/177-288     AC I7J696.1
#=GS Q81GF6_BACCR/4-127       AC Q81GF6.1
#=GS A0A841KY60_9CLOT/4-133   AC A0A841KY60.1
#=GS A0A7V7RPC7_9BACI/4-132   AC A0A7V7RPC7.1
#=GS A0A1I0B4Q0_9BACI/2-130   AC A0A1I0B4Q0.1
#=GS A6XMJ0_9CAUD/69-197      AC A6XMJ0.1
#=GS A0A6L8PBW6_BACAN/4-127   AC A0A6L8PBW6.1
#=GS A0A161PLU2_9BACI/3-129   AC A0A161PLU2.1
#=GS A0A061PC24_9BACL/5-133   AC A0A061PC24.1
#=GS A0A0X1TJW3_9FIRM/4-126   AC A0A0X1TJW3.1
#=GS A0A419SNL5_9BACL/4-135   AC A0A419SNL5.1
#=GS A0A6N8FHS5_9BACI/28-155  AC A0A6N8FHS5.1
#=GS A3DEI7_ACET2/4-134       AC A3DEI7.1
#=GS A0A5D8QCG5_9THEO/4-134   AC A0A5D8QCG5.1
#=GS A0A0M0GGS7_SPOGL/6-131   AC A0A0M0GGS7.1
A0A8J7KT84_9FIRM/4-132              ..................................DYVEIKGYFDGHRYSDNKS..R-KYSN.MLCKIEEFID.VNTIKLFYPKNLFV.DHKELEAYVVFEDK-ILRGRILQD.T..N.IEITTLKLKN.LTDFKCECTCN.PEGFHRLTLKFENDE-IIVFDSLEDT--NDSWSHKFE-n.........................
I8AHS9_9BACI/6-132                  .......yvefmklvktlslhkpednysfekanr-------------------..------.---FISEFVQ.ESEIKHIYVKNIFN.QEKGTELFLFLEDKILIVMGTEQT.T..N.--VKMLKRKD.IMEMDFEE--T.HYGVTNAIIKFRFPDREIMFESLNDS--NQHWNPKY--is........................
A0A1M6HK46_9CLOT/4-134              ..................................DYKEIKDYFYKNRYWDNAT..R-KYAE.MFEKVSQIID.ENDILCFYPKYLFV.DEQILQLYFILKNNKFIKVWINEE.K..R.IVMQFLNMNK.IKNVIYECPLG.DYGDYRLTLLFEEKAEEITFNSKEDT--NERWKYKFNE..........................
A0A3A9JLU5_9THEO/40-170             ..................................DFREVKEYYRSNLFSDETS..R-QYAG.MFEKVSQIVN.ENDILYFYPKYLFV.DEQTLQLYLFLKNNKFIKVWINDD.K..Q.IVIECFNTNE.IKNFAYECPLD.DYGEHKLTLFFEKGIEGIEFNSKKDT--NDNWKYKFD-k.........................
A0A1M4N8L1_9CLOT/4-134              ..................................DFKEIKDYFYNNRYSNNIA..R-KYAG.MFEKVSQVID.EDDILYFYPKYLFV.DEQTLQLYFILKNNKFIKVWINGD.K..H.IVIEYFNINR.IKSVTYECPLD.DYGDYRLTLLFEENVEEITFISKEDT--NEGWKYKFD-k.........................
Q0H267_9CAUD/69-197                 ...............................nye---QFGKWVKSESFRPDTG..Y-KLRL.AYFKINELLP.TNEIREFYPKNIVN.DKEDIELFAFLD-SKLIVILPKEE.E..T.I-FKVLYLKD.ISHVDLEIKKNvGFESWILKIYFTNNT-VIELNSVEDS--NEYWRYKYE-d.........................
I7J696_BABMR/177-288                .............................tvgef----------KMKYTNEEE..RINIAK.--NAVAHILE.DNMVLVVPIKKIIV.KNEHIDTLFWRDSHKHIEIWIPLR.H..S.ISCKDLKINF.STKDIKIT---.--------------------------------------ngdltllelplpgpiradecvwesdn
Q81GF6_BACCR/4-127                  ..................................NMKTIEEWIAESNARHEED..FGHVVE.EMKEVCVGLD.--NATLIYTKNVFC.FGKKVEVFFFFQDH--VVIGQEKD.E..Y.VEIEKLKYDA.ITNSNLKT--N.-DKNTTLELKFANGQ-SINLDSLNDNYGTKNWL--FA-r.........................
A0A841KY60_9CLOT/4-133              ...............................nfg---QLKEYSSRAFYSSDNP..QARVLSfIINEIEKIFD.ASDIVFAYPKNLFI.NNKQVELFLIDSKKQLIK-AIYED.K..N.LTISVYFAKD.IINFYNKVNHE.-DDSRSLIIKFASSE-TIEFNSRNDT--NTH-------hiqrfda...................
A0A7V7RPC7_9BACI/4-132              ......sytvedflddlrkrdvplplsltkmlpi-------------------..------.---QIEKSID.TEKVIAFYAKNMVKdFDEDKQFYFFLRDK-LIELSIVN-.K..Q.--MQFKNINQpIFEITFIPAQN.GTASAVLKLSFNNRE-DIIFNSLEDS--NPMWN-----dtyin.....................
A0A1I0B4Q0_9BACI/2-130              ............dyrefktltkdvvvengisesi-------------------..----IN.DFIKTSERLQlEQGLRNFYPQGLFV.YGNLV-LYFIYDDK-IIKVDFND-.G..Y.FKLSTYNINN.IEKLTLEMKAG.SDLERGLSIAFQGIEDYIFLESISDT--NSAWAYKFAK..........................
A6XMJ0_9CAUD/69-197                 ...............................nye---QFGKWVKSESFRPDTG..Y-KLRL.AYFKINELLP.TNEIREFYPKNIVN.DKEDIELFAFLD-SKLIVILPKEE.E..T.I-FKVLYLKD.ISHVDLEIKKNvGFESWILKIYFTNNT-VIELNSVEDS--NEYWRYKYE-d.........................
A0A6L8PBW6_BACAN/4-127              ..................................NMKTIEEWIAESNARHEED..FGNVVE.EMKEVCIGLD.--NATLIYTKNVFC.FGKKVEVLFFFQDH--VVIGQEKN.E..Y.VEIEKLKYDA.ITHSNLKT--N.-DKNTTLELKFANGQ-SINLDSLNDNYGTKNWL--FA-r.........................
A0A161PLU2_9BACI/3-129              .............ynyndfkedvksrrvaeysrv-------------------..---FSR.LISELDGLID.SNMITNFYPKNLYN.DIEEKEFIFLTENK-VFLVKANLE.N..Q.ISI--ISFEK.LINRIELISSK.HQNEVVLTVNFKSGD-VLILNSKADS--NENWVYEY--sg........................
A0A061PC24_9BACL/5-133              .............................delty-----EDLIIKDKASDFLTggRNRIVD.AMHLLNFKAE.--DVNYIYPKDMFD.QNKNSFTIFLFTDEQIIELQLPRN.E..YdYKIIKRKVDK.IINTEFAS---.ENGEYSLIINFVDDQ-FIRLDSLADTIQN---------gfkeeyk...................
A0A0X1TJW3_9FIRM/4-126              ................isqlressmryidsqsia-------------------..---LIY.MLKALDEILI.LDNEILVYPKNLYC.RDEDLILYIFTPTYQLITITYDLEvI..R.VVTRSLRY--.LVKSEYQL--A.-ENCHRLILSFADDE-IICFQPKKDT--T---------lpyvkefns.................
A0A419SNL5_9BACL/4-135              .nldtiyenihltdipkgyernsietainqiktl-------------------..------.-------GLE.-EGLLQLYPQGIYT.-EEMLKLLLFHKNN-FTVVSIESKdSrtK.LRFETIKYKA.IVSIELEMSDR.GNKYRQLSLGFGFGN-PIKLHSYEDT--NMHWSDPF--me........................
A0A6N8FHS5_9BACI/28-155             ..............................nyne-LKDLQDHIVFENEIKKYQ..LQYFFE.TIER--LGLD.-KSISSLYPKGLYY.-GDEINLILFYVDK--IVIANVSN.D..S.MSFETIKNCH.ISSVEMEVKRS.GDGKRKLSISFDNHK-EIVLIPKEDT------------visfgekffe................
A3DEI7_ACET2/4-134                  ..................................DYKEIKDYFYKNRYWDNAT..R-KYAE.MFEKVSQIID.ENDILCFYPKYLFV.DEQILQLYFILKNNKFIKVWINEE.K..R.IVMQFLNMNK.IKNVIYECPLG.DYGDYRLTLLFEEKAEEITFNSKEDT--NERWKYKFNE..........................
A0A5D8QCG5_9THEO/4-134              ..................................DFKEIKDYFYNNRYNNNTD..R-KYAS.MFEKVSQVID.ENDILYFYPKYLFV.DEQTLQLYFILKNNKFIKVWINED.K..R.IVMEFFNINK.IKSVTYECPLD.DYGDYRLTLLFEEKVEEITFNSKEDT--NEGWKYKFDE..........................
A0A0M0GGS7_SPOGL/6-131              tyndfledlkkrqiplgheliknlsgilgeyvnp-------------------..------.----------.-EKVGFFYGKNLFV.DGEK--LLYFFQENKIVEVKIQG-.R..N.VEFRV-HKQK.IVDVEFSHPFY.QDSPANLKLTLENGE-ILEFDSKKDA-SSKNWYS----syve......................
#=GC seq_cons                       .......................................tth..tt.h..p.t..h.phht.hhpclsphl-.tsslhhhYPKslFs.ppcplpLahhhcsp.hIplthppc.c..p.l.hchlphpc.Ipssphcs..s.t.sshpLpltFpssp..IphsShcDo..NptW...a..t.........................
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