GenomeNet

Database: Pfam
Entry: DUF3954
LinkDB: DUF3954
Original site: DUF3954 
#=GF ID   DUF3954
#=GF AC   PF13128.10
#=GF DE   Protein of unknown function (DUF3954)
#=GF AU   Aldam G;0000-0003-3039-8438
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF SE   Pfam-B_934 (release 24.0)
#=GF GA   23.70 23.70;
#=GF TC   24.60 24.00;
#=GF NC   23.10 22.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR025017;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family of proteins is functionally uncharacterised. This
#=GF CC   family of proteins is found in bacteria and viruses. Proteins in
#=GF CC   this family are approximately 60 amino acids in length.
#=GF SQ   49
#=GS A0A859FBX8_9BACI/9-57   AC A0A859FBX8.1
#=GS A0A160FDQ9_9BACI/3-43   AC A0A160FDQ9.1
#=GS A0A6N8HT34_9BACI/3-51   AC A0A6N8HT34.1
#=GS W4Q5P0_9BACI/17-63      AC W4Q5P0.1
#=GS A0A433HJU0_9BACI/2-49   AC A0A433HJU0.1
#=GS W8CYU2_9CAUD/2-50       AC W8CYU2.1
#=GS A0A3M8H7Q6_9BACI/6-47   AC A0A3M8H7Q6.1
#=GS A0A8J3DYV4_9BACL/6-54   AC A0A8J3DYV4.1
#=GS A0A6L7HF10_BACAN/5-53   AC A0A6L7HF10.1
#=GS A0A2U3AP84_9BACL/5-51   AC A0A2U3AP84.1
#=GS Q81D17_BACCR/5-53       AC Q81D17.1
#=GS A0A0B5D0E9_9CAUD/3-45   AC A0A0B5D0E9.1
#=GS A0A177L5B9_9BACI/17-59  AC A0A177L5B9.1
#=GS A0A4R6TQN9_9BACI/12-60  AC A0A4R6TQN9.1
#=GS A0A1S2LK14_9BACI/2-50   AC A0A1S2LK14.1
#=GS A0A0A1MNU2_9BACI/15-63  AC A0A0A1MNU2.1
#=GS A0A1B0T6B8_9CAUD/5-53   AC A0A1B0T6B8.1
#=GS A0A1L3MXZ2_9BACI/2-49   AC A0A1L3MXZ2.1
#=GS A0A2U8UUU1_9CAUD/3-45   AC A0A2U8UUU1.1
#=GS A0A143HC64_9BACL/8-52   AC A0A143HC64.1
#=GS A0A5R9F283_9BACI/8-50   AC A0A5R9F283.1
#=GS I3WU13_9CAUD/2-50       AC I3WU13.1
#=GS A0A5J6PLX5_9BACI/6-50   AC A0A5J6PLX5.1
#=GS A0A317KVV8_9BACI/5-56   AC A0A317KVV8.1
#=GS A0A6N9Q2T7_9BACL/17-65  AC A0A6N9Q2T7.1
#=GS A0A398B5D4_9BACI/2-44   AC A0A398B5D4.1
#=GS A0A6L7HSW7_BACAN/5-53   AC A0A6L7HSW7.1
#=GS A0A143HHF9_9BACL/8-50   AC A0A143HHF9.1
#=GS A0A859FF00_9BACI/10-58  AC A0A859FF00.1
#=GS A0A7V7UWL2_9BACI/11-59  AC A0A7V7UWL2.1
#=GS A0A366DPN2_9BACI/26-73  AC A0A366DPN2.1
#=GS A0A0C2V9V5_9BACL/3-48   AC A0A0C2V9V5.1
#=GS F5L9E9_CALTT/14-61      AC F5L9E9.1
#=GS A0A1G8IIN2_9BACI/12-60  AC A0A1G8IIN2.1
#=GS A0A268E9W8_9BACI/9-56   AC A0A268E9W8.1
#=GS A0A1I0GYQ0_9BACI/4-54   AC A0A1I0GYQ0.1
#=GS A0A0A8JKN2_BACSX/4-48   AC A0A0A8JKN2.1
#=GS A0A1B1P7U5_9CAUD/5-53   AC A0A1B1P7U5.1
#=GS A0A345C3L0_9BACI/9-52   AC A0A345C3L0.1
#=GS A0A554A0M0_9BACI/1-48   AC A0A554A0M0.1
#=GS A0A366DT05_9BACI/2-52   AC A0A366DT05.1
#=GS A0A1I4Q6U1_9BACI/12-57  AC A0A1I4Q6U1.1
#=GS A0A0B5AMM0_9BACL/5-52   AC A0A0B5AMM0.1
#=GS I7J4H6_9CAUD/2-50       AC I7J4H6.1
#=GS A0A1B1P8J8_9CAUD/5-53   AC A0A1B1P8J8.1
#=GS A0A2N0ZB50_9BACI/15-63  AC A0A2N0ZB50.1
#=GS A0A3N9UKW8_9BACI/3-46   AC A0A3N9UKW8.1
#=GS A0A177L711_9BACI/9-55   AC A0A177L711.1
#=GS A0A3M8HDC1_9BACI/5-47   AC A0A3M8HDC1.1
A0A859FBX8_9BACI/9-57              ......ta--TIDL.T.D..N.ATYVVKDGHIKKVTPVSSGFGKQT.ITWQQE..K.-..--------pvyeevtit
A0A160FDQ9_9BACI/3-43              .vnndkvt-VEISL.M.E..N.SLYVVKDGRITKIEVLQTGYGEYT.------..-.-..--------vi.......
A0A6N8HT34_9BACI/3-51              ........KAEISL.E.E..D.AVYKVTDGQIEKVDTPGEGYGKQI.ITWQNG..K.-..--------pthyevsyt
W4Q5P0_9BACI/17-63                 .......i-VEIEV.K.S..R.QILIVENGEITAIDPPSSGFGDQL.IVWING..A.V..DRVE----nk.......
A0A433HJU0_9BACI/2-49              ......ia--EIDL.M.N..NkKLYCVKDG--ILIEHDLPDYGETL.IITLGG..K.V..DRLETTV-k........
W8CYU2_9CAUD/2-50                  ........KREIDM.K.T..N.GIYIVVDGKINFEEPPKSGYGQQV.LYWVKG..K.V..SHTQTTIT.........
A0A3M8H7Q6_9BACI/6-47              ...qelqd------.-.-..-.GIYLVKDGQMKKVQAPTTGYGKTI.ISWESN..K.P..TR------avh......
A0A8J3DYV4_9BACL/6-54              ........KATIDL.M.D..SkKLYVVKDGR--LIKHELPEYGETVvIITMGG..Q.V..DRIETTI-k........
A0A6L7HF10_BACAN/5-53              ........KIEIDV.T.D..N.KIYVVKNGEVTPLNPPVTGFGEQV.ITWQGG..K.V..DRVSTTIT.........
A0A2U3AP84_9BACL/5-51              ......ek--QIDL.T.K..D.AVYIVRGGKLIQIDNPPLGFGKQE.ISWQDG..K.P..TH------vdfk.....
Q81D17_BACCR/5-53                  ........KVEIDV.T.D..N.KIYVVKNGEVTLLNPPVTGFGEQV.ITWQGG..K.V..DRVSTTIT.........
A0A0B5D0E9_9CAUD/3-45              .....ked------.-.-..-.GVYIISKGEETYIKPPKNGFGQTT.IGWSHG..K.-..--------pttaenket
A0A177L5B9_9BACI/17-59             ...eraak------.-.-..-.TMYVVKDGQLIPHEPP--DYGETV.VITIGG..K.V..DRLETT--qk.......
A0A4R6TQN9_9BACI/12-60             ...tasip-----A.D.E..N.SVYVVRDGMVYQVSCPSSGYGEHE.LRWLGG..R.V..DT------ckeikt...
A0A1S2LK14_9BACI/2-50              .......t-VDIDL.L.K..N.CIYIVKNGELIQVDPPSTGYGEQI.AVWLGG..K.V..DRVET---ktc......
A0A0A1MNU2_9BACI/15-63             ........KVEINL.S.E..D.KVLVVKGGKLKEYPKPDSGFGKQI.INWNDG..K.I..--------cneeiryt.
A0A1B0T6B8_9CAUD/5-53              ........KVEIDV.T.A..N.KIYVVKNGEVTPLNPPVTGFGEQI.ITWQSG..K.V..DRVSTTYT.........
A0A1L3MXZ2_9BACI/2-49              ......sn---LDL.T.K..D.GVYIVKDGECKRVTDPNSGFGKQT.IVWQNG..K.V..NHCEITFT.........
A0A2U8UUU1_9CAUD/3-45              .....ked------.-.-..-.GVYIISKGEETYIKPPKNGFGQTT.IGWSHG..K.-..--------pttaenket
A0A143HC64_9BACL/8-52              ......ka---IDL.S.E..D.AVYVVCDNKITKLDSPSTGFGKQE.VTWQKG..K.-..--------pthsei...
A0A5R9F283_9BACI/8-50              ........KVSIDK.T.K..N.GIYVVSNGELFSLPAPPSGFGKTI.VLWQYG..E.-..--------fmn......
I3WU13_9CAUD/2-50                  ........KREIDM.K.T..N.GIYIVVDGKINFEEPPKSGYGQQV.LYWVKG..K.V..SHTQTTIT.........
A0A5J6PLX5_9BACI/6-50              ..lkieqa------.-.-..-.-VCLIKDGEMELVEKPQYGYGKQI.ITWQNG..K.P..--------thieiqst.
A0A317KVV8_9BACI/5-56              .....qiq---IPV.N.DlkD.KVIIIKKGVPTVLDRPATGFGENV.ISWTDG..K.ItaDRVSYT--n........
A0A6N9Q2T7_9BACL/17-65             ......ii--ETEL.N.Q..S.KVFITKEGELTEVPPPKTGYGEQT.ITWQGG..K.I..KLVRTT--yi.......
A0A398B5D4_9BACI/2-44              ......ta--EIDL.M.K..N.ATYIVRDGQLKQVPSPPEGYGKQI.INWQGG..K.-..--------pch......
A0A6L7HSW7_BACAN/5-53              ........KVEIDV.T.D..N.KIYVVKNGEVTPLNPPATGFGEQI.ITWQGG..K.V..DRVSTTIT.........
A0A143HHF9_9BACL/8-50              ......ia--EIDL.H.D..N.AVYVVAGGRITQVDPPPSGYGKQE.ISWHKG..-.-..--------epth.....
A0A859FF00_9BACI/10-58             ......ta--EVDL.T.E..N.AVYIVKDGFIKKVNRPETGFGRHI.VSWQKG..K.-..--------pvyaeiqvt
A0A7V7UWL2_9BACI/11-59             ......ke--TIDL.T.E..N.ATYVVSDGKLEKLPMPRTGYGEHV.VEWLGG..H.M..HK------svntev...
A0A366DPN2_9BACI/26-73             ...dfsaq------.-.E..D.KTIIVKQGEVIVLDKPASGYGENV.ITWANG..E.IqgDRVSYT--n........
A0A0C2V9V5_9BACL/3-48              ......kk---ISL.M.E..N.AVYVVKDGQLTKVTVPSGGFGTDE.VVWQNG..T.V..I-------dvirs....
F5L9E9_CALTT/14-61                 ......ta--EIDV.R.V..P.GTYVVSEGKVEFFPIPETGYGSQV.VKWHQG..K.W..--------qetegtt..
A0A1G8IIN2_9BACI/12-60             ........KAEIDL.N.E..N.AVYRIRDGNIEKVDTPGEGFGKQI.ITWQNG..K.P..S-------hyeityt..
A0A268E9W8_9BACI/9-56              ......ta--EVDLmN.D..K.KMYVVKDGK--LIEHDLPDYGETV.IITLGG..K.V..DRLETTV-k........
A0A1I0GYQ0_9BACI/4-54              ......ta--EIKL.D.Q..D.AVFVVKKGQLKKINAPDSGYGEQT.ITWQNG..K.IhaEKVSYTV-k........
A0A0A8JKN2_BACSX/4-48              .....tav---VDL.R.K..N.GTYIVKDGKLLPIPSPPAGYGKQV.INWQGG..K.-..--------pcngt....
A0A1B1P7U5_9CAUD/5-53              ........KVEIDV.T.D..N.KIYVVKNGEVTPLNPPVTGFGEQV.ITWQGG..K.V..DRVSTTIT.........
A0A345C3L0_9BACI/9-52              ....qpqd------.-.-..-.VVYVVRDGEVLKLNPPNTGYGHNN.IVWIGG..K.V..DRVDST--es.......
A0A554A0M0_9BACI/1-48              ......ma--KIDL.S.V..N.RAYIVVDGVIHHIDDLPRGFGEQV.ITWQNG..K.-..--------pvhtkvty.
A0A366DT05_9BACI/2-52              .......e-IKIDL.T.E..D.KVIIVSRGELIQIDKPRTGYGENV.VTWVDGeiK.S..DRVSYT--nk.......
A0A1I4Q6U1_9BACI/12-57             ......ta--EIDL.T.E..N.AVYKVRNGVIESVDIPGDGFGKQI.ITWQDG..K.-..--------pegyki...
A0A0B5AMM0_9BACL/5-52              ......sf----DQ.N.E..N.ALYIVKDGELTELKPPQDGHGTDE.VIWKDG..RaI..DVI-----rstri....
I7J4H6_9CAUD/2-50                  ........KREIDM.K.T..N.GIYIVVDGKINFEEPPKSGYGQQV.LYWVKG..K.V..SHTQTTIT.........
A0A1B1P8J8_9CAUD/5-53              ........KVEIDV.T.D..N.KIYVVKNGEVTPLNPPVTGFGEQV.ITWQGG..K.V..DRVSTTIT.........
A0A2N0ZB50_9BACI/15-63             ......ta--EINL.S.I..N.ATYVVSDGKLEMLKMPESGYGEHV.VEWLGG..N.M..HRT-----inset....
A0A3N9UKW8_9BACI/3-46              khvadlkd------.-.-..-.GVYVVKNGEMKAVQAPATGFGKTI.ISWEAN..K.P..T-------rai......
A0A177L711_9BACI/9-55              ......ta--EIDL.MnD..K.TMYVVKDN--RLIPHTLSDYGETV.VITMGG..K.V..DRFET---ke.......
A0A3M8HDC1_9BACI/5-47              ..lqdlqd------.-.-..-.GIYLVKDGQMKKVQAPTTGFGKTI.ISWESN..K.P..TR------avh......
#=GC seq_cons                      .......t..pIDl.p.c..s.slYlV+cGclphlssPsoGaGcpl.IsWpsG..K....ph...............
//
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