GenomeNet

Database: Pfam
Entry: DUF4020
LinkDB: DUF4020
Original site: DUF4020 
#=GF ID   DUF4020
#=GF AC   PF13212.10
#=GF DE   Domain of unknown function (DUF4020)
#=GF AU   Aldam G;0000-0003-3039-8438
#=GF AU   Mistry J;0000-0003-2479-5322
#=GF SE   Pfam-B_2014 (release 24.0)
#=GF GA   22.70 22.70;
#=GF TC   22.80 23.80;
#=GF NC   22.30 21.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR025093;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This presumed domain is functionally uncharacterised. This
#=GF CC   domain family is found in bacteria, and is typically between 176
#=GF CC   and 195 amino acids in length.
#=GF SQ   21
#=GS A0A3N4Z4J9_9MICO/993-1099   AC A0A3N4Z4J9.1
#=GS A0A073JZB3_9BACI/971-1146   AC A0A073JZB3.1
#=GS A0A146G4P0_TERSA/1001-1108  AC A0A146G4P0.1
#=GS Q81C40_BACCR/63-238         AC Q81C40.1
#=GS A0A0Q8UN52_9ACTN/993-1099   AC A0A0Q8UN52.1
#=GS A0A4R2KWU2_9GAMM/998-1132   AC A0A4R2KWU2.1
#=GS N0E228_9MICO/983-1111       AC N0E228.1
#=GS A0A841JRK4_9BACT/1007-1168  AC A0A841JRK4.1
#=GS A0A1A1Z3M0_9MYCO/986-1155   AC A0A1A1Z3M0.1
#=GS A0A2A8SFX0_9BACI/979-1154   AC A0A2A8SFX0.1
#=GS A0A1T1D332_9SYNE/1000-1138  AC A0A1T1D332.1
#=GS B1ZQ15_OPITP/920-1093       AC B1ZQ15.1
#=GS A0A2R4FQ49_9ACTN/991-1104   AC A0A2R4FQ49.1
#=GS A0A852R840_9ACTN/990-1109   AC A0A852R840.1
#=GS A0A081FX80_9GAMM/1002-1164  AC A0A081FX80.1
#=GS A0A4U5JP78_9GAMM/998-1156   AC A0A4U5JP78.1
#=GS A0A2T0RBZ1_9ACTN/965-1099   AC A0A2T0RBZ1.1
#=GS A0A2K9DZA1_9FIRM/142-286    AC A0A2K9DZA1.1
#=GS A0A6V8KHI2_9ACTN/154-304    AC A0A6V8KHI2.1
#=GS A0A2T0AVD1_9THEO/1008-1121  AC A0A2T0AVD1.1
#=GS A0A4Y9RJ20_9BURK/999-1154   AC A0A4Y9RJ20.1
A0A3N4Z4J9_9MICO/993-1099              ................aaiavrsddp-----------PTPWLPQLTTKASRMVRLAWTRSVGRQLRGIEASEAHAQWERWIERYWRGR----VESIPRPFTHDEASAIA.GWVLGLPSVRAETIGLVE.QAPAG----------------------------------------------------------------------------lerddr.......................................
A0A073JZB3_9BACI/971-1146              .........................l-FLKCILYWEKETGWVYPLFVADNEEDKLTFMTCIRDYGKTLSEREQHKLWRDWLAEFLIER--PKIGAV----SGKEYMMFL.RFVFCMKAITLDGIQLIL.EYLPLQVMQVEQEDIKQLFTDILYKKDEFPDHSKVYARLLLMLLTTLQDGRFYEEEVVTLKQLLYEYNLESGMLEAIQNEM.............................................
A0A146G4P0_TERSA/1001-1108             .....................iavyg-----VAQPWTDGGWLSHYVSTFNPPLRRKLAETLRQILEAMTPEASAELWNRWLKHYWHDR-IDRIPAV---LNSDEVDNMV.LWPLYLRQYFPEAVELLG.RSP------------------------------------------------------------------------------kftlvmvd.....................................
Q81C40_BACCR/63-238                    ..........................VFIKCVLYWEQKTDWLYPLLILENEENKIKFMQFLCYYVKTLSVKEQQKFWTAWLSVFLRER--PKMGEI----TAREYVMLL.RIILYMDEILEKGLCIMS.RAFSSVHGKCAGEEMKQLLIEMLHKKESMKAHKEIFANVFFILLQTCHEAVLFEKEVIKIKELLVQYEVEEYVLHLLENEI.............................................
A0A0Q8UN52_9ACTN/993-1099              .................tvavrfddp-----------PTPWLSQLATKASSKVRLAWTRSVGRHLRDMNAEEAHAQWARWIGAYWHDR----VASVPRPFGYDEASAIA.GWVLHLPLVRDEAVGLVE.AVPSG----------------------------------------------------------------------------lerddri......................................
A0A4R2KWU2_9GAMM/998-1132              ..............laviqvsdptqq--------------LLPELFRKGSLRDRIEFASNVGRFLRQMQEAQTRQLWDSWLRRYWQGR----LQGVLAVLEDAEAKKMF.EWVPSLGGAFPEAVALVIqHNPIRM---------------------------------------------------------------------------ehshavfelrssalvldfpnetaelliylagcv............
N0E228_9MICO/983-1111                  .....................iamfa--------PVDPATWLTRFIGAASEDLRVSWAQEVGRTLAHLEPGDAPGQWDRWIRAYWSGR----NQSVPLPFTPTEASATA.EWVVELPDVRNQAIDLVL.GSEAG----------------------------------------------------------------------------ldqhggflyrlkdvdvaaeardwarllthl...............
A0A841JRK4_9BACT/1007-1168             ......................plds-------------GWLDEFLTRAQNRERMHWVGSVTDILRDADDQAKESAWDRWIRRYLEAR--VQSNPI--ALDADESGAMC.EWTLVLKSHYAEILELLL.ASPAP------NLKRGMFYYR-LQEAALLDRAPALTARLLTALLSQEDGQQLWDLEQV-----------------------himvsdlidlkatepalrplceq......................
A0A1A1Z3M0_9MYCO/986-1155              .................iaiyaeyhp------------GEWLPQFLTSAKPEDRREWANRIAFHLSSLPADGAEEQWQRWMRQYWTDR----LDSVPMPLDIDEASAMA.QWPINLSTSMTEGVELAL.RHAAR----LATPPLVLHRLAEASSEEILRRDPEQIARLVAHILAGTESPCYTAFELPEVLEKLERYGASEAS--------trdireq......................................
A0A2A8SFX0_9BACI/979-1154              ..........................VFLKCILYWDEQIDWLYTLFIQGEELEKVKFVGNVSYYVKTLSIKEQQKFWQDWLADFLVER--PKMSII----LGKEYIIFL.RFVLHMDAIAEKGIEAVL.SYFSISSLHKEKQEVKYLFKQMLEKSELIHQNPKVYANLFFVLLTKLNDAECIENEIINLQKIFDETKLENTLFECIQNEM.............................................
A0A1T1D332_9SYNE/1000-1138             iamsylindakdkwickffrhtqkkp-------------------------ELRHKFTMQISHLLRNLDENSQREWWKVWLKDYWNNR----LQGIPSPLENAEISIMLeKWVIHLQGVFPEAVSTAV.QMNPVNLEKCS----------------------------------------------------------------------rllhhidqsnlidchpndlarflihlgks................
B1ZQ15_OPITP/920-1093                  ..........................IMVH--VRPAETAAWLQALLPALSERERLRWARLAARDSEGMPDQAQRELWDAWLGAYWRDRRAGRLGGVTLSLTSAEAAIMA.GWLCALPEVFAEALELVM.HSPAP------NFEHEIFPWRELRKSSLPVRAPVGVVALIEFLLRNMEVGRVSHESVSEIADALPRLAILRAPLLRVAEVM.............................................
A0A2R4FQ49_9ACTN/991-1104              ................iavygstdpl-------------TWVEEFTARAEEDQRIVWMSEVADTLGTLAPDVVEQQWQRWMQRYWQRR----LNSVPTTLTLGEASALA.TWVPWLTDSLAAGVDLAM.RHPAGL---------------------------------------------------------------------------terhtlddwsderl...............................
A0A852R840_9ACTN/990-1109              ....................siamfa--------PVDPATWLTRFVVDASEELRVAWARAVKRALTQLEASEALSQWDRWIRAYWSGR----NQSIPRPFTPAEASATA.SWVTELHGARRQAIDLVL.GSQASLD--------------------------------------------------------------------------qhggflhrvedidvaada...........................
A0A081FX80_9GAMM/1002-1164             ..................fhvsdptq-------------QLLPALFDHGSLEDRLTFATHLGYFLRKMEQSARQQLWNGWLRQYWQDRQQGVL----ATLDDTEIRKML.EWLPYLGDVFPDAVALAG.SFPV------IRIEHAYFLY-ELRNSELITRFPIESAELLIYLANCICLSGYSPADLEEINARLPQL--------------pdqlrhkvnea..................................
A0A4U5JP78_9GAMM/998-1156              .............lcvfhvdnplqql---------------LPNLFQHGTEENRTTFASQIEYMLRQLDPQGVDKVWEGWLSRYWQER----LQGVLAPLAPRECREMV.EWLPHLGVHFPAGVQLAT.RMPAL------PGEHNHVLF-ELRASDLVTRFQEATAQLLIYL--------------------------------------sdgiagfdlayltevaarldalpehvsr.................
A0A2T0RBZ1_9ACTN/965-1099              ...................laqvavy-------AAADPAGWLADLTRTATSEARAAWISSVDDVLGQAGTEKAEQQWTRWMRAYWQDR----LDSRPRSLTEEEGSALA.GWVVRLDGSTAEAVALAV.RHPARL---------------------------------------------------------------------------ashghllrglgdragahpaayaslllhllrht.............
A0A2K9DZA1_9FIRM/142-286               ........................ia--IFCEIDETKDKKWIIEMMSVVSDHVRAIFAKVLRRELSSLDTNKNDRLWDDWIRDYFSNR--NR--NIPIKLSTSEINEMM.YWVFCFDKYFNEVVEYIT.QND------------------------------------------------------------------------------isfnifiihalwnegrdlinkhpdsvgkyfyhlikgvsalcapye
A0A6V8KHI2_9ACTN/154-304               .................alhgashpm-------------TWVEDFTRRASEQQRVEWMSQIAYILDGLDAPAVEQQWQRWIAQYWNQRANSR----PLRLTKDEASVMA.TWATLLTVSFADGVALAT.AHPAALTKRRS-LE----DWT----EERIAKNPRLFAKLLAHLLRNTE---------------------------------qpiwdnvarvtsvirdqae..........................
A0A2T0AVD1_9THEO/1008-1121             ...............iavrssvdplq------------NGWLDRFIATVDEETRISWANKVAHELTRLSPEAAKEIWDKWIKNYWSRR----IDGIPLPLSPAEVGVMV.DWALALKPVFSEVVDLIV.TGPIPV---------------------------------------------------------------------------lrfssiyyrlak.................................
A0A4Y9RJ20_9BURK/999-1154              .................fhvlnptqh--------------LLPTLFQHGSMDDRLAFASHFGYFLRQMQQPAKQQLWSGWLRRYWQDR----LQGVFAPLDEAEIRTML.EWLPYLGDAFPDAVALAV.RCTTI------RIKHSQVL-HELRESELVTRFPIETAKLLIYL-AGCTV--------------------------------dyhandlakiearlpvipvqvrr......................
#=GC seq_cons                          .......................................sWLsphhspuspcpRlpasppluchLcslssptscphWscWlcpYWpcR....lpul.hsLsssEssths.pWlhtLssshs-uVsLsh.ptsuh..............................................................................hhthh......................................
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