#=GF ID DUF4119
#=GF AC PF13494.10
#=GF DE Domain of unknown function, B. Theta Gene description (DUF4119)
#=GF AU Ellrott K;0000-0002-6573-5900
#=GF AU Bakolitsa C;
#=GF SE Bacteroides thetaiotaomicron: BT_0594
#=GF GA 27.00 27.00;
#=GF TC 27.00 33.90;
#=GF NC 26.70 19.30;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP Family
#=GF WK Domain_of_unknown_function
#=GF RN [1]
#=GF RM 15790854
#=GF RT Glycan foraging in vivo by an intestine-adapted bacterial
#=GF RT symbiont.
#=GF RA Sonnenburg JL, Xu J, Leip DD, Chen CH et al
#=GF RL Science 2005 Mar 25;307(5717):1955-9.
#=GF RN [2]
#=GF RM 16735464
#=GF RT A hybrid two-component system protein of a prominent human gut
#=GF RT symbiont couples glycan sensing in vivo to carbohydrate
#=GF RT metabolism.
#=GF RA Sonnenburg ED, Sonnenburg JL, Manchester JK, Hansen EE et al.
#=GF RL Proc Natl Acad Sci U S A 2006 Jun 6;103(23):8834-9.
#=GF DR INTERPRO; IPR025186;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC Based on Bacteroides thetaiotaomicron gene BT_0594, a putative
#=GF CC uncharacterised protein. As seen in gene expression experiments
#=GF CC (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE2231), it
#=GF CC appears to be upregulated in the presence of host or vs when in
#=GF CC culture [1,2]
#=GF SQ 5
#=GS A0A3L8AAG3_9BACE/15-101 AC A0A3L8AAG3.1
#=GS R6DP19_9BACE/17-101 AC R6DP19.1
#=GS E5CFX0_9BACE/10-101 AC E5CFX0.1
#=GS Q8AA71_BACTN/11-97 AC Q8AA71.1
#=GS A0A1M4ZH21_9BACE/11-101 AC A0A1M4ZH21.1
A0A3L8AAG3_9BACE/15-101 .............vknnvqn-------RKKSGDRCKKTEIISRDELEKRGGLTGDETALFTVYLQKFDKGDVHMKYSKKLKDLAKHIHEKEHLYVPKQGGYKLME--vs
R6DP19_9BACE/17-101 ......nnaqnrkksggrck----------------KAEIISEEELEKRGGLTGDETALFTVYLQKFDKGDVHMKYSKKLKDLAKHIHEKEHLYVPKQGGYKLME--vs
E5CFX0_9BACE/10-101 skndkvkrsvqtmkkaprrh---------------SREEIISEEELDNRIAIDGDIRLYFTMYLKIFIDGHFRHPKKRKLINLAQYIYDQKVLYIHKHGGYKLME--ls
Q8AA71_BACTN/11-97 ....................ATGTQKKRSLETDYQDDDEIIDIDEVRKRNGITGEKKHYFIACLRTYYEDDEFNSYVKSLTGLAKYIADWRIFYVNTHHGYRLMKFR..
A0A1M4ZH21_9BACE/11-101 .....tkkqtkmiekmakkr-----------VQKQYKNEIISREELENRGGLVGSKIEYLNLHLKKFLEKHLYYHHLKTLSDLALYIYHEKKLYYSKHNGFKLMEY-s.
#=GC seq_cons ......ppt.phhcKss+p+...........sphppKsEIIScEELEKRGGLTGDcptYFTlYL+KFh-GDl+h+YsKKLpDLAKYIa-c++LYVsKHGGYKLME..lS
//
