GenomeNet

Database: Pfam
Entry: DUF4888
LinkDB: DUF4888
Original site: DUF4888 
#=GF ID   DUF4888
#=GF AC   PF16229.9
#=GF DE   Domain of unknown function (DUF4888)
#=GF AU   Chang Y;0000-0002-2418-3433
#=GF SE   Jackhmmer JCSG target SP18371
#=GF GA   25.00 25.00;
#=GF TC   25.50 60.40;
#=GF NC   21.70 20.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF DR   INTERPRO; IPR032614;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of uncharacterized proteins around 190
#=GF CC   residues in length and is mainly found in various Staphylococcus
#=GF CC   species. The function of this family is unknown.
#=GF SQ   6
#=GS W5R9A2_9CAUD/43-183      AC W5R9A2.1
#=GS Q4ZBG8_9CAUD/43-183      AC Q4ZBG8.1
#=GS Q2FXC0_STAA8/47-187      AC Q2FXC0.1
#=GS A0A0F6N4L1_9CAUD/43-183  AC A0A0F6N4L1.1
#=GS A0A6B7H6J9_9CAUD/43-183  AC A0A6B7H6J9.1
#=GS M9NUJ8_9CAUD/43-183      AC M9NUJ8.1
W5R9A2_9CAUD/43-183                 TDSELWKNVRDALKDANIIDKTDKETIKVKYKLKNGGESEISGTANLDNLSNTNnsTVSPDSVNRVDITRVNPNG---NTIEANDAWKKLVDKLKEKHIVKVGDKVTIHSKDPSdEKVYGKVGDQDSNVKNRLISPKDITHITI
Q4ZBG8_9CAUD/43-183                 TDSELWKNVRDALKDANIIDKTNNETIKVKYKLKNGGESEISGTANLDNLSNTNnsAVSPDSVNRVDITRVNPNG---NTIEANDAWKKLVDKLKEKDIVKVGDKVTIHSKDPSdEKVYGKVGDQDSNVKNRLISPKDITHITI
Q2FXC0_STAA8/47-187                 TDGQLWKKVKDSLHDSDIILSNEYETINVTYLLSNGYSSSVSAPGNDDGGHLTQ..SIDFKGLKQIDLTKENVYDDFNKKLDAKNTWNSLTEKLKGLGLLQNGQKVSIYSSDSS.SPVSGKVGEGVTSGGENTLTKRFINKITI
A0A0F6N4L1_9CAUD/43-183             TDSELWKNVRDALKDANIIDKTDKETIKVKYKLKNGGESEISGTANLDNLSNTNnsTVSPDSVNRVDITRVNPNG---NTIEANDAWKKLVDKLKEKHIVKVGDKVTIHSKDPSdEKVYGKVGDQDSNVKNRLISPKDITHITI
A0A6B7H6J9_9CAUD/43-183             TDSELWKNVRDALKDANIIDKTNNETIKVKYKLKNGGESEISGTANLDNLSNTNnsTVSPDSVNRVDITRVNPNG---NTIEANDAWKKLVDKLKEKDIVKVGDKVTIHSKDPSdEKVYGKVGDQDSNVKNRSISPKDITHITI
M9NUJ8_9CAUD/43-183                 TDSELWKNVRDALKDANIIDKTDKETIKVKYKLKNGGESEISGTANLDNLSNTNnsTVSPDSVNRVDITRVNPNG---NTIEANDAWKKLVDKLKEKHIVKVGDKVTIHSKDPSdEKVYGKVGDQDSNVKNRLISPKDITHITI
#=GC seq_cons                       TDSELWKNVRDALKDANIIDKT-pETIKVKYKLKNGGESEISGTANLDNLSNTNNSTVSPDSVNRVDITRVNPNG...NTIEANDAWKKLVDKLKEKcIVKVGDKVTIHSKDPSDEKVYGKVGDQDSNVKNRLISPKDITHITI
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