GenomeNet

Database: Pfam
Entry: DUF4904
LinkDB: DUF4904
Original site: DUF4904 
#=GF ID   DUF4904
#=GF AC   PF16247.9
#=GF DE   Domain of unknown function (DUF4904)
#=GF AU   Chang Y;0000-0002-2418-3433
#=GF SE   Jackhmmer JCSG target MG14528A and PDB 3ECF
#=GF GA   27.70 27.70;
#=GF TC   29.70 30.10;
#=GF NC   26.70 25.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0051
#=GF DR   INTERPRO; IPR032596;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain, approximately 130 residues in length, is mainly
#=GF CC   found in several uncharacterized proteins around 340 residues in
#=GF CC    Actinobacteria, Cyanobacteria and Metazoa species. It is mainly
#=GF CC    composed of antiparallel beta sheets and has a cystatin-like
#=GF CC   fold,  but the specific function of this family is unknown.
#=GF SQ   9
#=GS A0A7W7ZKM5_9BACT/63-171  AC A0A7W7ZKM5.1
#=GS K9RQZ0_SYNP3/2-114       AC K9RQZ0.1
#=GS A0A2R5FNW4_NOSCO/6-134   AC A0A2R5FNW4.1
#=GS B7JXD2_RIPO1/1-129       AC B7JXD2.1
#=GS Q8YWM3_NOSS1/1-129       AC Q8YWM3.1
#=GS E0ULL5_GLOV7/1-129       AC E0ULL5.1
#=GS A0A5M8SY89_9BACT/1-114   AC A0A5M8SY89.1
#=GS A0A7W8IIE6_9BACT/1-114   AC A0A7W8IIE6.1
#=GS A0A7W8E4N3_9BACT/1-113   AC A0A7W8E4N3.1
A0A7W7ZKM5_9BACT/63-171             .......MSREEKVALVEAYLDCFETKDLSKLS..FAEDVTFEGP-RMPMLAGRETVLGFLAHILPMVRNIQLK..QHIVEDEYVATVFDMETANGVDHVFDR-------------------------------------irivdgqiksihafyyse......
K9RQZ0_SYNP3/2-114                  ...sasp------VEVVENYFTALQAKDLKKLP..LADTIIFTDPLAG-TLTSQTAVVAFLSNVLPILQAITIH..YHVQDQNRVVTRWDAQTTLGMIEI-LEWFEISDGHIQVAQAFFDPRVIT---------------qtr.....................
A0A2R5FNW4_NOSCO/6-134              .....kg--KEEYREIIDYYFRSFGTGDFLKVQ..FSSEIQFLSPISERTINGREEVVRFVSGVATRVSEVNVL..SITIQYPRASGVWQMKTTKGTLYTLHNFFRLDEEGIVYIWPMFDPKAIIDNPEGLLQWLTGNGY........................
B7JXD2_RIPO1/1-129                  .......MNREAVVKIIDQYLCAFESGNFSEVQ..FSSKMQFISPIREEPVVGNDTIRGFLTDVSSRIAAVTIR..EHIIDYPKASSLFEFKTTKGDVFIFLDYFEFDEEGISLIWPCLDPKLLIADSQRLPQFLTGENY........................
Q8YWM3_NOSS1/1-129                  .......MDTEKYHEMLKTYFRSFETGDFSQVQ..FSCHLEFLSPISGNTFKGIEEVISFLKGVTTRVSEVNIM..STTVEYPRASGVWQMRTTKGILYTLHNFFRLDEEGIVYIWPMFDPKAVIENPDALIQWLTGKDY........................
E0ULL5_GLOV7/1-129                  .......MDTTKYHEIIEQYFQAFKTGDFSLVQ..FSPNIQFLSPIRQDTIDGIEAVVNFVSGVATRVSEVNVL..SITVEYPRASGVWQMRTTKGTLYTLHNFFRLDEQGLSYIWPMFDPKAILDDPDALLAWLTGNGY........................
A0A5M8SY89_9BACT/1-114              .......MSREEQIRTVEAYLNCFATKDLSNVS..FAEDVTFEGP-RMPKLTGREVILGFLTSILPMVKGIELK..QHIVEGDYIATLFDMETVNGVDHVFDRIHIVDGE------------------------------ikgihafyypqqapea........
A0A7W8IIE6_9BACT/1-114              .......MSREQKVAAVEAYLDCFVTKDLSKVS..FAEDVTFEGP-RMPKLTGRPTVFGFLTHILPMVKGIQLK..QHIVEGDYVATVFDMETVNGVDHVCDRI------------------------------------hivdgqikaihafyypdeipeg..
A0A7W8E4N3_9BACT/1-113              .......MTRGEMVSVVEAYLDCFVTKDLSKVS..LAEDVTFEGP-RMPRLVGRASVVGFLTQILPMVRGIQLK..QHIVEGDFAATVFDMETVNGVDHVFDRLHIVD--------------------------------gkiqsihafyypeqase.......
#=GC seq_cons                       .......Ms+EchlcllEsYhssFtTtDhScVp..FupclpF.uP.RhsplsGp-sVluFLoslhshVpslpl+..pHlVEhshsuoVa-McTspGs.alhccha.lDtt......................................................
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