GenomeNet

Database: Pfam
Entry: DUF5003
LinkDB: DUF5003
Original site: DUF5003 
#=GF ID   DUF5003
#=GF AC   PF16394.9
#=GF DE   Domain of unknown function (DUF5003)
#=GF AU   Chang Y;0000-0002-2418-3433
#=GF SE   Jackhmmer:Q8ABA1
#=GF GA   25.00 25.00;
#=GF TC   25.40 64.30;
#=GF NC   21.60 24.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR032167;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This small family of proteins is functionally uncharacterised.
#=GF CC   This family is found in bacteroides. Proteins in this family are
#=GF CC   typically between 500 and 650 amino acids in length.
#=GF SQ   9
#=GS A0A173WUU4_9BACE/142-464  AC A0A173WUU4.1
#=GS R6CJU8_9BACE/132-458      AC R6CJU8.1
#=GS A0A374CKC5_9BACT/144-466  AC A0A374CKC5.1
#=GS A0A255SWC4_9BACT/147-464  AC A0A255SWC4.1
#=GS R6DAB7_9BACE/144-471      AC R6DAB7.1
#=GS Q8ABA1_BACTN/146-466      AC Q8ABA1.1
#=GS R6BS93_9BACT/133-451      AC R6BS93.1
#=GS R6YRE2_9BACT/1-160        AC R6YRE2.1
#=GS A0A173XJI6_9BACE/145-407  AC A0A173XJI6.1
A0A173WUU4_9BACE/142-464             .................KIY....DMEGNEIHE--.IEVGYDN......YKPFQVKANFRFAATNRPEWLEIAGNAIVGTVNEMTKGEVKVMDN-PQYAKYV----Q.NGTLTFADEDGAMS.YPFPLVYKGMDPKSIKILD---SNPWNWEVSLDGKTFTQTSS.AGASASTT.ISTYNKFVPYTVQ..ALNDEVVPVYIQK..vEEYGTVKMKIGEedgvdwMRLEDEGqGNLRLKVDQ-SSEEREG...........YVLVLPKALYEEIKDELwENLI.EmdmetNEQDIKYTYQQSNLLINFVQKEKKQEAAQA.FKVTYTGEGWTTLEATCTKV...TDAD...IL.ESYPGVSDVYtMEWPA------------------nimmggitvdplegqvyddws
R6CJU8_9BACE/132-458                 .................KVYvktsENEEIDVTKTG.LTVGYKNiagqpiYNKFYVKSNYRFAVTNTPAWVDIEGGFMVGTPNKEAEGGLAFKENAGLSAKYAVAKDD.NYTITFTSEDGKAA.VTVPVIFDGMTADIMDITYPTSNQWAVWNVSMDGAVYTQNGS.SLNNDATN.AFTFNKFVPFKLS..TLNDAYQLVVFET...SDWGLREDMVGA......VQLQGEK.GDMKLTVAPLASGSREF...........FVYALPQSVFESLGNGT.DDML.E.....EDFTTVKSDYDRYFLMNIVQKEKSNGGAEV.QLPLVTSMG-MDMNCALTEN...EEFKmyaEG.LFSYTGKDVF.-EATVYGGYVCIYPQIDGWNPTE.....................
A0A374CKC5_9BACT/144-466             .................KVY....DALGHDITETG.IIVGYKNvagqpiYNKFTVKSTYRFAVTNTPAWVELEGGFLVGTPNNEVVGGAAFKEGQGLNAKYAIAKEA.NYTITFASEDGKAA.VTVPVVYNGMTTHTMDITYPTSSQWAVWNVSMDGKVFTQNGS.SLNGDATN.VFTFHNFVPFQLN..TLNDDYQLVVFDK...KEDGLREETSGA......VKLQGEK.GDVKLTIDALSSGSREF...........LVYALPQSVFESLENGL.DGML.E.....EDFMTVKSDYDRYFLMDVVQKEEKKGDSEV.TAPIVTSMG-MNVDCALTTN...DDFKsyaEG.IFSYTGKEVF.-ESTVYGGYVAIYPQIDGWDPT-a....................
A0A255SWC4_9BACT/147-464             ................s-VF....DEAGNDITSTG.IVVGYDK......YVKFSVKANYRFAVTNTPEWVELEGGFMVGRAGELTVGGAMFKEG-VRNAKYAISIDE.GETITIASQDGKAM.KTIPVRFNGMPTNTMDIVYPTSSPWADWTVSLDGKTFSQTGStGISGNGGNdTFTFSNFVPFTLK..TAADDFTLVVFQT...ESWGVEPCYDHF......VKASGEN.GDIRITVDALDGGERDC...........YVYALPKAVYESLSN-L.YEMF.D.....EE-GNVSWLYNPYFLMHFVQKEQSGTEADS.KAPTVLVGGWKEVDCKKETTgiyNEVA...AN.YLGYSGDEIY.VATVSVGDYVTITPNIAGYEP--qd...................
R6DAB7_9BACE/144-471                 .................KIY....DKEGNDITENGvLKVGYQE......YFCFDVEANFRFAATNLPGWVELEGGSLVGAVNKKVQGGLRIIEN-ESREKYPVSASD.ENVITFSDEEGRSF.YTIRLAYEGMTPGKMELKRP-SSYATDWVVSMDGKTFTQKST.---GGSTG.EVVVKKRMPFTVK..TLKDDFEIVFLSEgwdGNIHLKGSMYDFft.yewVHCEKDE.GNLNLTVDDYIPNAMNGdpd....ersgYVLAFSRAEYEKIKDNL.EEAI.V.....VNGEIDYKYEQNNLLIGFTQKEVKEEPQNN.SF-KIKKGGWEEVSPSKTTE...QSIL...DFlQGNYMLDEVY.SISANAGDYYSIYPLLS------esewage..............
Q8ABA1_BACTN/146-466                 .................KIF....DEEGVEINE--.LKVGYQH......FSKFSVQANFRFAATNLPGWVELEGGSLVGPVNQKVSGGLKIIED-DNREKYPVPASD.KNVITFSDEEGKAF.YSFNVSYDGMTPGVLEMTLP-SSNKYDWAVSLDGKTFTQSAG.GVAGTGGS.TTTLKNRVPFTVK..TLNDDYEVVFVEKg.sNNNDLYIMDASYn...ewMRCEREG.GKATLIVDEYTPASYEPae......rvgYVLVFSRAQYEDIKDNL.EATIiD.....GE-DLVYKYEQSNLVLQFTQKETKGGGDEL.AITAVDGQTYNPIDCTSYTG...GDAD...YF.KSEYGVTGIFeIKQPASVATVAKMPF--NWSNSV.....................
R6BS93_9BACT/133-451                 .................KVY....DAAGNDITETG.ITVGYNV......YNKFTVKSNFRFAVTNTPAWVDLEGGFLVGTPNKEVVGGVAFKENQGVSAKYAIAKDG.NYTITFTSEDGKAA.VTVPVIYNGMTTSTMDVTYPTSSQWAVWNVSLDGKVFTQNGS.SLNGGDTN.DFTFYNFVPFTLK..TLGDAYQLVVFEK...EKDGLREDVTGA......VKLQGEK.GDVKLTIDALSSGSREF...........LVYALPQGVYADFENGL.DEML.E.....NDYTSVKSDYDRYFLMDVVQKKANSSADDQsAAPTILKMNYLPVECKKDKSm.yGSII...SE.AFGYNGDEIY.VAQSEVGSSLTVNPNIKDWDPTT.....................
R6YRE2_9BACT/1-160                   .................---....-----------.-------......----------------------------------------------------------.--------------.------------------------------------------.--------.-------------..-MGDAYQLVVFDK...KEDGLREETSGA......VKLQGEK.GDVKLTVAPLGSGSREF...........LVYALPQSVFESLENGL.DGML.E.....EDFMTVKSDYDRYFLMDVVQKEKKKGDSEV.TAPIVTSMG-MNVDCALTTN...EEFKsyaEG.IFSYTGKEVF.-ESTVYGGYVAIYPQIDGWDPT-a....................
A0A173XJI6_9BACE/145-407             geenpatlkysvvgisl---....-----------.-------......-ENISVVANFDWEIQRYPEWISIDGKYRVGKAGKTSVIALDFAENADV--RYPLEAGDiNNKIVFVNKDGQEYsIEIPVAYEGMPEDAV--QFP--MNTYGWTFSQDGSQYW--TA.SLSGEEVE.----KKEAPMKLQviTRDDEYKTVCLSF..dEKWGYTPLDEWSt....wIYPEKDE.QDVRNISISVRSNEEDMmtgnsgdprkgMVLVLPSKKYEELGGDM.NNLF.Dd...lDGFFELKEQYAQYILADFTQEGK-------.--------------------...----...--.----------.-----------------------aaiekggfti...........
#=GC seq_cons                        .................Kla....DttG.-Isc...lhVGYpp......YppFsVcuNaRFAsTNhPtWV-lEGGhhVGssNcps.GGlthhEs.s.ptKYslstss.s.sITFssEDG+uh.holPVhYpGMssssh-lphP.SSphhsWsVShDGKsFTQsuo.ulsGsuss..hThpphVPFplp..TLsD-YplVshpc...cc.GLctphsut......V+hpsEc.GDl+LTVDslsSuuREh...........hVhALPpulYEslcssL.-shl.-.....p-htpVpp.YspYhLhshVQKEpppsss-s.thshlpshG.hsl-Cshsps...p-ht...th.hhsYssc-la..tpsshGshlslhP.ltsaps..t....................
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