GenomeNet

Database: Pfam
Entry: DUF5006
LinkDB: DUF5006
Original site: DUF5006 
#=GF ID   DUF5006
#=GF AC   PF16397.9
#=GF DE   Domain of unknown function (DUF5006)
#=GF AU   Chang Y;0000-0002-2418-3433
#=GF SE   Jackhmmer:Q8A796
#=GF GA   34.10 34.10;
#=GF TC   34.60 34.10;
#=GF NC   33.10 32.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR032170;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This small family of proteins is functionally uncharacterised.
#=GF CC   This family is found in bacteroides. Proteins in this family are
#=GF CC   around 600 amino acids in length.
#=GF SQ   11
#=GS Q8A2X9_BACTN/3-266        AC Q8A2X9.1
#=GS Q8A796_BACTN/2-264        AC Q8A796.1
#=GS A0A174EP99_9BACE/4-266    AC A0A174EP99.1
#=GS R6DQ33_9BACE/2-269        AC R6DQ33.1
#=GS E5CCM2_9BACE/2-264        AC E5CCM2.1
#=GS R6DHX1_9BACE/2-268        AC R6DHX1.1
#=GS A0A3L7Z2G7_9BACE/2-264    AC A0A3L7Z2G7.1
#=GS E5C941_9BACE/2-267        AC E5C941.2
#=GS A0A7L4ZFD5_9FLAO/197-311  AC A0A7L4ZFD5.1
#=GS A0A1Y3VLC1_9BACT/2-258    AC A0A1Y3VLC1.1
#=GS A0A0M9DZ22_9DELT/2-154    AC A0A0M9DZ22.1
Q8A2X9_BACTN/3-266                   ...........KRILYTFLPVCLLATGFAGC-DDDAVEPLP.ETVPLIIEASGKSFVMGEELTLTVKVN.DEKNPQLTTNEDFDVYLT....A....KDGE.MDVSKIAFKDFPSMVTVPKGVSSFDIKLPIVESGLe.pKQKLTVNVTAFVRGYAMTNPTQTVVVSDHYYTVVSLKNNSDNIINEGDEFTIQVQTPVPVKDDMDI..NITIPDD.QKSLYETLPPvTLTVNAGETLAEAK-VKTKHNLSPTQHETLVLNFTTI.S..VMYPLDNDKMEIIMKDLEAGKGSKLLD............
Q8A796_BACTN/2-264                   ...........KNILYKILPVCLLTIGLTGCEDETKYRPLP.EAVPLTMSINEKAFVMGEHLKVDIKVEpDADGNEVVANEDFDIYFT....A....KAGT.EDVAN-VFEPFSSIVTFPKGEKQIQVDFPVKTSGL...VGTTTMEFVAFARGYKMANSSQGIKVSDYYRISMSLENNTENVVTEGGKFVLVAKVDKPSSVPLEV..TITPKEG.EEGRYDNLPS.TLTIPAGRTSVKSAAVTIKQDYEMTGDLQLVLNLKSN.S..SSNPMTAPALTITMTDLESMADPDLYD............
A0A174EP99_9BACE/4-266               ...........KNILYACLPLGIWAMLLTGCKDDDQIAPLP.KPVPLTLALESNTLVMGETLNMTFSVK.DEQGAGLAANEDFDIYLA....V....VEGT.TDVSKAVFNNFPEMVTFPKGETDLEISVPVKSSGI...TKSVLATLTAFARGYKMDGSEQVVKVSDYYRTTISIKGNSDLVVREGDTFILQMKVEVPAKEDIVV..TVTPGAG.ESDFYENLPS.TLTIAAGELSVESEPITMLADGYPFGDRKLTFKFTSE.S..VHHPLLSEEMNLTQQDIDTPLGSELED............
R6DQ33_9BACE/2-269                   .kkilewtylw------MLPL-LVVVSMSGCSDDDNVSPLA.EPVPLKMTLNSTDLVMGEVLEITFDVT.GTEEGRKAMNEDLNIRLS....A....TTDK.GAVDQLVFDDFPSVVTLNKGESTKKVQIPVKKEGL...NKERSVEISAFARGYRMAGALQIVTVSDYHYSKVSLKNNADNTVKEGQTFVLVASVNTTLKDDLTI..TIIPKAG.EEERYENLPS.ELVIPAGANSIESEPVTMKKDVNTTEDEELTLDLATV.PlmSRYPLQATKLTIMKIDIHKNMGSEVRD............
E5CCM2_9BACE/2-264                   ...........KNILYKIFPICLLTMGLTGCEEETKYRPLP.EIVPLTMSINDNAFAMGEHLKVNINVEpDADGKEVVANEDFDIYFT....A....KAGT.EDASN-VFEQFNGIVTFPKGEKQIQVDFPIKASGL...TGSTAINFTAFARGYKMEGSSQVIKVSDYYRIMASLENNADNVVMEGGKFVLVAKIEKPSSVPLNM..KITPKEG.EGDRYENLPS.TLTIPAGRTSAKSDAVTIKQDFEMTGDLQLVLNLESD.S..PANPMINSTLTITMTDLESMGDPNLFD............
R6DHX1_9BACE/2-268                   ...........KKFFYGLLPVCLLALLMTGCDDTETVISIG.ESRNLVAEISTQSAAIGDEVTFSVKI-.DQQDNSLALEEDIDVVLTftgkN....VEGK.EVAASDVFDNFSGHIYMKKGEKQGFTEFKVKNNLA...KYPVSGAITAYVRGYKMNAAERPIVLSDKHYTIMSLKNNSDNTVKEYGYFVLLATVGAPAKEDVTI..TINAGDD.-ADKYENLPD.KLIVKAGYKTAESGFIRIKGEQGPNSFTSVSMSFSSD.S..ENHPVYGNEMEIKVTDTDAGL------vagteltn....
A0A3L7Z2G7_9BACE/2-264               ...........KNILYKILPVCLLTIGLTGCEDETKYRPLP.EAVPLTMSINEKAFVMGEHLKVDIKVEpDADGNEVVANEDFDIYFT....A....KAGT.EDVAN-VFEPFSSIVTFPKGEKQIQVDFPVKTSGL...VGTTTMEFVAFARGYKMANSSQGIKVSDYYRISMSLENNTENVVTEGGKFVLVAKVDKPSSVPLEV..TITPKEG.EEGRYDNLPS.TLTIPAGRTSVKSAAVTIKQDYEMTGDLQLILNLKSN.S..SSNPMTAPALTITMTDLESMADPDLYD............
E5C941_9BACE/2-267                   ...........KKYFYRLLPICLFILVMTGCNDTETVISIG.EARNLVAEISTQSAAIGDNVTFTVKV-.DQQDNQLALEEDIDVVLT....FagknVEGKdVPVSD-VFEGFAGHLFMKKGEKQGFTEFKVKNDLA...KYPISGTITAYVRGYKINAAERPIVVSDKHYTILSLKNNSDNTVKEYGSFILVATVGASAKEDVVV..HIDAGED.-ADKYENLPS.ELVVKAGYKTAESELIWVKGEKGPNTFTSVSMSFATD.S..EIHPVYGDELEIKVTDTDAGLTP----gtelt.......
A0A7L4ZFD5_9FLAO/197-311             ilngiainvan------------------------------.---------------------------.------------------....-....----.-----------------------------------...-----------------------------------------DQYNEGETFTIEFTTETAVSSDLDL..TITLDNG.TFDTADFTGTtTVTIPTGQMSVTTM-ITLVDDTLDEGDEELIINLEDNfS..VEYIILNNEVLIRAVD-----------ddftvap.....
A0A1Y3VLC1_9BACT/2-258               ..kklfiflgf--------------FGMVACSDDKTEDLLSgQRSPLEVTLNSTSLCRGETLTATIRFD.ATDENAVEERKDFQLYFE....S....LENG.AP-SE-LFAEFPAEVTFPADQEQITVDFPIKESGF...TGEHTVKLWVSAEGRAITGAAQTITVSDYHYITVSVKDATSMDVVEGRTFVLQAQIAEPAQADLDI..AIAPENEaAKGDFENFPS.TLTIAKGETVAESAEITVSWDDGETQEDH-DWNFAAT.V..GNDKYAVKPFTITRIDADLAKGDRLLD............
A0A0M9DZ22_9DELT/2-154               ........fkv------------------------------.---------------------------.------------------....-....----.-------------------------------KSGIdssDTSLNLGFTSVANGYYGLPENGTVHITNL--PTVSWTKETFMVMEDSASFEITAQLSYTSAQDILVpfTVTGTAE.SGADYETIET.SITIPSGETSAS-KMITIITDKIIESDETLIFTINSI.S..SGAVLGMETVQ----------------tvtiqnddegyf
#=GC seq_cons                        ...........KphhYthLPlsLhshshoGCpD-pphtsLs.EssPLhhplsspuhshGEpLphslcVp.DtpssplshpEDhDlhho....s....htGp.tssup.VFcsFsuhVThsKGEpphplchPlKpSGl...stshohphoAaARGY+MssupQslpVSDaahhhhSLcNNo-NsVpEGspFlLhAplstPupsDlsl..TITspss.ptscYENLPS.TLTIsAGcsSscSt.lTlKpDht.suDppLshshsos.S..sppPlhssplpIphpDh-shhsspl.D............
//
DBGET integrated database retrieval system