GenomeNet

Database: Pfam
Entry: DUF5040
LinkDB: DUF5040
Original site: DUF5040 
#=GF ID   DUF5040
#=GF AC   PF16443.9
#=GF DE   Domain of unknown function (DUF5040)
#=GF AU   Chang Y;0000-0002-2418-3433
#=GF SE   Jackhmmer JCSG target SP16796C
#=GF GA   25.00 25.00;
#=GF TC   180.90 180.90;
#=GF NC   24.80 20.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR032221;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several uncharacterized proteins around
#=GF CC   260 residues in length and is mainly found in various
#=GF CC   Bacteroides species. The function of this family is unknown.
#=GF SQ   14
#=GS A0A174RR13_9BACE/28-254   AC A0A174RR13.1
#=GS A0A2V3PL58_9BACT/44-271   AC A0A2V3PL58.1
#=GS A0A1T5B3F1_9BACT/28-254   AC A0A1T5B3F1.1
#=GS A0A840CTC1_9BACT/26-252   AC A0A840CTC1.1
#=GS A0A4Y8L439_9BACT/22-249   AC A0A4Y8L439.1
#=GS F8WXC0_9BACT/25-251       AC F8WXC0.1
#=GS A0A374W751_9BACE/22-246   AC A0A374W751.1
#=GS A0A374AC96_9BACT/25-251   AC A0A374AC96.1
#=GS A0A2N4SAM1_9BACT/27-253   AC A0A2N4SAM1.1
#=GS E5CBD5_9BACE/25-251       AC E5CBD5.1
#=GS A0A0B5RQH7_9FLAO/196-423  AC A0A0B5RQH7.1
#=GS F5IZT8_9BACT/35-261       AC F5IZT8.1
#=GS A0A840CP71_9BACT/26-252   AC A0A840CP71.1
#=GS A0A1R3STK9_9BACT/38-264   AC A0A1R3STK9.1
A0A174RR13_9BACE/28-254              ...EYKILLTGASFASPQNGWFEIGCRKLNAEAINRAIGG.EAIANTANRMANGTLYSKEELENIDALVIMQVHNKDVYEELQLKDKYTDYE.VPFDRSNYAAAYDYVIKRYLTECYELRNDTTSKYYNTPYGKPAIIVLCTHWHDCRTVYNESIRKLAAKWGFPLIEFDKYIGFSKNVLHPVTGKPFSQLYST.DI.QVTEGIAYGHHPIR.GEQSYMQQRMAAIFVDSMNRIL..
A0A2V3PL58_9BACT/44-271              ..k-YTILMTGASFASYQNGWFEIGCKELHARALNKAVGA.EAIADGANRMVKGTLYSKQELEDADAFVIMHVHNMDVFEDSELKENYRDYK.VPFDRSNYAAAYDYVIKKYISDCYNLKFDKDSKYYNTQSGKPVIIVLSTHWHDARPIYNESVRLLAQKWGFPVIEFDRYIGFSKNTPHPVTKQQMSTLYAD.DNtETIDGVVYGWHQLR.GEDKFIQQHMAAIFVDTMKKVL..
A0A1T5B3F1_9BACT/28-254              ..s-IKILLTGASFAEKSNSWFEMGCEQLGAIPLNRAKGG.EAIANTANRMYEGVLYTKEELEEIDAFVIMQVHNRDVYEDSQIKPAYTDYQ.MPIDRSNYAAAYDYVIKRYLSDCYNLKFDKNSRYYGSLTGKPALVVLCTDWHDARTLYNESVRKLAAKWGFPLVEFDKYAGFSKNQLHPVTGAQTSLIYST.DK.QVIDGVTYGWHPLR.GRHQPVQQRMAAVFADLMHKLL..
A0A840CTC1_9BACT/26-252              ..q-YTILLTGASFASPQNGWFEIGCRKLKARPVNRAIGG.ESIANTANRMIDGTLYSFEELDNIDALVIMQVHNRNVFDESQLLSKYTDYP.VPFDRSNYAAAYDYVIKRYISECYELKNNQESKYYGTKSGKPAVIILCTDWHDGRIIYNTSVRRLASKWGLPLVEFDTSIGFSKGSPHPVTGEQQSLLHAK.DT.QTIDGVKYGWHPNR.GEDKYIQQRMAAIFTDLMKKVL..
A0A4Y8L439_9BACT/22-249              ...KYKLLLTGASFASDENGWFEVGCRQLNATSVNRAVGA.EAIADAANKMAKGELYTKAELEEIDAFVIMHVHDKDVVEDSEIKENIEDYK.IPFDRSNYAAAYDYVIKKYLTDCYNLKFDKNSKYYNTITGKPAIIVLSTHWHDSRPLYNRTVRELAEKWGFPVIEFDRYIGFSKKALHPVTKQQTSIIFTDnNT.EDIDGEVFGWHQFR.GESQYIQRKMAAVFVEEMKKVL..
F8WXC0_9BACT/25-251                  ..k-YTILLTGASFASSNNGWFELACKTLDATPINKAIGG.EAIADAANKFSADTLYTKQQLEDIDAFVIMHVHDEDVASENGLKENYKDYK.TPFDRSNYAAAYDYVIKHYITDCYNLKFDKNSKYYNTPSGKPAIIVLCTHWHDARIIYNSAIRKLADRWGFPVVEFDKYIGFSKNHLHPVTGKQYSILYAH.NN.EKVNGVEYGWHPYN.GEDKYIQQRMAAIFTDLMKKVL..
A0A374W751_9BACE/22-246              .rg--NILLTGASFAVPENGWFEIGCEVLEFTPINRAVSG.QAIMQTAQAMKNGALYTTSQLDDIEALVIMHVHNQNVAKEDWLEDDYNDYT.L-TDATPYSVAYDYVIRKYKDDCKNLKDVPTSKYYGTADGKPAIIVLGTHWHDSRTTFNPAIRKLAKKWNLPLIEWDANIGFTKDVLDSDGSQP-SLKFAG.DT.ETIDGVKYGWHPLR.GKGQYIQKKMAEIYIAKMAEI-f.
A0A374AC96_9BACT/25-251              ..k-YTILLTGASFASPQNGWFEIGCRQLDARALNRAIGG.ESIADTANRMAEGTLWNAGELDEMDALVIMQVHNRDVSATGGLKEKYTDYT.TPFDRSNYAAAFDYVIKRYQSECYALKDDPKSKYYGTKSGKPAVIVLCTDWHDARTTYNAAIRRLAARWGLPLVEFDRNIGFSKDTPNPATGTQQSLLHAQ.DT.QTIEGVAYGWHPQR.GQDKYIQQRMAAIFTDTMRRIL..
A0A2N4SAM1_9BACT/27-253              ..s-YTFLLTGASFASPDNGWFEIGCSLVGATPINRAIGG.EAIADAANRMNAGTLYSREELEKIDALVIMQVHDKDVCDSTQILPRYTDYR.TPFDRSNYAAAFDYVIKRYLTECYNLKFDPRSEYYNSKYGKPAVIVLCTDWHDGRVTYNTSVRRLAAKWGFPLVEFDRYIGFSRNALHPVTGQQISLLFTN.DK.QEIDGQTFGWHPEN.GTNAYIQRRMGAIFADTMRRI-f.
E5CBD5_9BACE/25-251                  ..t-YTILLSGASFAEPNNKWFEMGCRALHAIPINRAISA.ESIAHTANKMLDGTLYTPEEFDDIDVFVLMQVHEKDVYNEANLKENYKDYA.TPFDASDYAVCYDYVIKRYISDCYNQKFNPKSKYYNTPYGKPASIVLCTHWHDSRPVFNTSVRKLAEKWGFPVVEFDRYIGFSKNRKHPVTGKQYSLIYTG.DS.QTTHGEVFGWHPPH.GEHSFIQQRMAAIFADTLRKIL..
A0A0B5RQH7_9FLAO/196-423             tss----LMIGASFASPENSWYKNAYNRLRSYHVNYADGGgVGMNNYVNKIYRGELYTKETLDKFNHLVIYISHNLNVYNQKGVRESYLDYEpINGNQYNSTQNWDYCLKKYSADCEAQKNNPNSKYYGTKRGKPVSVIVFTHWHDGREIYNESIRKLRSKWDFTLIELDKNIGFTKKKINPNTKRQVSLDYAV.DT.EVIDGETFGWHPKRtGKELYVQDKTEEMFYNTIS---kl
F5IZT8_9BACT/35-261                  ..k-YTILLTGASFASSNNGWFELACKQLNAKPINTAIGG.TAISDAANRMAKGELYTQEELEDIDAFVIMHVHDENVADTAGLKQNYKDYP.VPFDRSNYAAAYDYVIKRYITECYNLKFDKDSKYYGTENGKPVVIVMCTHWHDARTIFNPAIRKLGERWGFPIVEFDKYTGFSRNHLHPVTGKQYSILYAH.NN.ETINGEEFGWHPDE.GQDKYIQQRMAAIFAELMEKVL..
A0A840CP71_9BACT/26-252              ..k-YTILLTGASFASSNNGWFELGCKYLDATPINRAVGG.QAIADGANMMVEGKLYTAEELENIDALVIMHVHDKNVADTVGLKKNYTDYT.VPFDRSNYAAAYDYMIKRYITECYNLKFDKNSKYYNTPAGKPVVIVFSTHWHDVRVTYNQAIRLLGERWGFPVIEFDKYIGFSKDSLHPVTGKQYSIIYSH.NN.EKVSGEEFGWHPYN.GEKEYIQQRMAAIFVDLMKKVL..
A0A1R3STK9_9BACT/38-264              ..q-YTFLLTGASFASPNNGWFEVGCQLTGATPLNRAIGG.EAIADAANRMAEGTLYSKEELEEVDALVIMQVHDRDVFGSSTLKEEYTDYE.IPFDRSNYAAAFDYVIKRYLTECYNLKFDEKSRYYNTRMGKPAVIVLCTDWHDGRVTYNTSIRKLAEKWGFPVVEFDKYIGFSKNSVHPVTKEQTSLLFTG.DN.QQIAGEKFGWHPEN.GRDSYIQRRMGAIFADTMRKI-f.
#=GC seq_cons                        ..p.YTILLTGASFASspNGWFElGC+pLsApPlNRAlGG.EAIAcsAN+MscGsLYopEELE-IDAhVIMpVHs+DVhcpstLK-sYpDYp.lPFDRSNYAAAYDYVIKRYlo-CYNLKFDpsSKYYsT.sGKPAlIVLCTHWHDuRslYNpolR+LApKWGFPllEFD+YIGFSKsslHPVTGpQhSllaus.Ds.psI-G.paGWHP.+.GccpYIQQRMAAIFsDpM+KlL..
//
DBGET integrated database retrieval system