GenomeNet

Database: Pfam
Entry: DUF5418
LinkDB: DUF5418
Original site: DUF5418 
#=GF ID   DUF5418
#=GF AC   PF17439.6
#=GF DE   Family of unknown function (DUF5418)
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   PRODOM:PD021793
#=GF GA   25.00 25.00;
#=GF TC   26.00 26.00;
#=GF NC   24.70 21.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR035582;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of unknown function found in Methanocaldococcus
#=GF CC   jannaschii. Family members have three predicted trans-membrane
#=GF CC   regions.
#=GF SQ   4
#=GS Y554_METJA/1-151        AC Q57974.1
#=GS Y587_METJA/1-151        AC Q58007.1
#=GS Y129_METJA/16-168       AC Q57593.1
#=GS A0A7J7K193_BUGNE/1-100  AC A0A7J7K193.1
Y554_METJA/1-151                   ..MVNEHKAHASFMFKIINVFVSFGFNLILGILIYDIFFNIDENLVVAC..ILIAMPIIAFLILILTGGVHKELTYLQ.IYDKYKLMCEFIREITISTITSELATIATMILYQLQNPIKTITFLLLLIAFLAFGLIFTKLLIDAYFITLKKLKSLK......
Y587_METJA/1-151                   ..MVNEYKAHSSFILKVVITLIGYWIASILAIIIYSMFFKIETNTFLLC..LLLPTPIIWFNILIGMGLTYRCMENLT.IYDKHKLWCVFVRDLTLTILATILATLTTMELYQIEHPLKPIEFVFIVGLVLIVGFTIITTLIIKYLKIIKNLKKIS......
Y129_METJA/16-168                  ..MVNEHKAHLSVIQKMILAVVNGSITIILSIIVFYIFYPQNISLFLITagILTVFVFLYGLLLFLFGFTHRELSYLS.KYDKYKFLCKFTIEMFSSLTNHAFLTISAIVLYQIQHPKPTIDFIVMIGMITISVIVVMLLFLKTYSIIIKQLKKLE......
A0A7J7K193_BUGNE/1-100             mk-------HSSNITKLVLTCVSIMVSTLMSMALFDLQITLYFVISLSF..ILIGLPLYMLGILGCWQVTARCLSGASgIFSSYSLWCLPLYDVIQPTWCEAM-----------------------------------------------------nrlsgv
#=GC seq_cons                      ..MVNEaKAHuShIhKlllshVuhhlshILuIllaslFaslphslhLhs..ILlshPllhhhILhhhGhTaRpLohLo.IYDKYKLhChFlh-lh.ohhspthhTlssh.LYQlppPh.sIpFlhhlhhhhh.shhhhhhhl.tY.hhlKpLKplp......
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