GenomeNet

Database: Pfam
Entry: DUF5420
LinkDB: DUF5420
Original site: DUF5420 
#=GF ID   DUF5420
#=GF AC   PF17457.6
#=GF DE   Family of unknown function (DUF5420)
#=GF AU   El-Gebali S;0000-0003-1378-5495
#=GF SE   PRODOM:PD111055
#=GF GA   26.00 26.00;
#=GF TC   26.20 26.10;
#=GF NC   25.60 25.30;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR035360;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a domain of unknown function found in
#=GF CC   Gammaproteobacteria such as Haemophilus influenzae.
#=GF SQ   14
#=GS A0A873WRH1_9CAUD/4-194   AC A0A873WRH1.1
#=GS A0A263HBX2_9PAST/3-186   AC A0A263HBX2.1
#=GS A0A3S4YD82_MANHA/1-191   AC A0A3S4YD82.1
#=GS A0A239AWG7_9DELT/23-179  AC A0A239AWG7.1
#=GS S7VFA2_9DELT/4-179       AC S7VFA2.1
#=GS I3DJ38_9PAST/3-186       AC I3DJ38.1
#=GS A0A0M3LP85_9CAUD/1-191   AC A0A0M3LP85.1
#=GS D2TQ40_CITRI/3-192       AC D2TQ40.1
#=GS A0A0C4UQZ6_9CAUD/4-184   AC A0A0C4UQZ6.1
#=GS A0A085HHD7_9GAMM/6-200   AC A0A085HHD7.1
#=GS A0A4D6E033_9CAUD/6-203   AC A0A4D6E033.1
#=GS A0A7S7YC53_9CAUD/4-194   AC A0A7S7YC53.1
#=GS A0A0K1LJK8_9CAUD/5-193   AC A0A0K1LJK8.1
#=GS Y1487_HAEIN/4-186        AC P44214.1
A0A873WRH1_9CAUD/4-194              ............................................................................r-DYRFYK--ISKEATEQIKKETDEIQAKRQR...LLNEAIesvgaEGV...SFS..NS..WGENG....TTIRAFAFAVDKE.FDFAVKEI-----HRTSELRII.RAKANSKKGKEFNATLDAakdeL....NKKLKDLPCFKDYIINKFDIQCCSISQH...gSGAGM.RMLE...TIVgyp.qtdKSFLIC.AIPNHERGMDKQ--PNIPDCFEEITYG--------vfydlsn.................
A0A263HBX2_9PAST/3-186              ............................................................................p-EFRYFKCALSVEPIKSLDEQWRKDRELRDK...KLDAIF.....DTI...PFY..EC..WRGSE....SNIFGIVCSLDSDeFAKIKEDKTYKFEIVENEKVVI.TGNGRTKAGKAFNDKIQS....V....RDILNQYPSFNDFMLRKLKLNCWVLGAR....--TGY.VSVC...GVA.......SDYFIV.SIPVKSEGFGGDGFPAIPECLTEIKQSEFLMLQGK........................
A0A3S4YD82_MANHA/1-191              .............................................................................MKFRFFKGDITQEPLKSIYADYQVSKEERKD...KLNAIL.....EKY...PFN..DG..LVSGSgwfhRMVNGIACKATN-.ISQVSDVKGFKVSKFDDEFYLV.KPDKRYKKGKELAEDFKA....I....NEIYEKHRDFSPYILKRLNMLYFASDFSysptSGRSY.LAVA...GIC.......ENTLLV.KMPMPIDKND-EPFPEIAEGLVEIKESEFLAIQGK........................
A0A239AWG7_9DELT/23-179             .................................................................anakydafieaa-------------------------------...---NAF.....KQA...RGY..EN..IWMRG....TSVGGPVFKEKL-.SGKDAKSKGLKMDCYVTEGYGY.APHLGTKLGTELNTALD-....-....-ELSKSSIDRGQFVVKKLDMRHEVYCGR...vIGR--.-TVA...GFR.......DGVIVV.KVPTGNGDPQNGDMPTPPPWLVPCKESEALAA---lgr.....................
S7VFA2_9DELT/4-179                  kfyigegdeaakliasldqalasfskareetcsvfgfdgvlsrelplggvtvvgfwtkddievgqrtsrgvlpqsms-------------------------------...------.....---...---..--..-----....-------------.----------------GDGHGW.RPDMRTKTGKILKAALTE....L....NDK---TVDYSVYLTRSLGIGFHA--AF....NGRLY.ISVA...GAV.......GGKVLA.KVPQRDYSDTTA--PTPPQWMREVKESEFLAAQG-r.......................
I3DJ38_9PAST/3-186                  ............................................................................p-EFRYFKCALSVEPIKSLDEQWRKDRELRDK...KLDAIF.....DTI...PFY..EC..WRGSE....RNIFGIVCSLDSDeFAKIKEDKTYKFEIVENEKVVI.TGNGRTKAGKAFNDKIQS....V....RDILNQYPSFNDFMLRKLKLNCWVLGAR....--TSY.ISVC...GVA.......SDYFIV.SIPVKSDGFGGDGFPAIPECLTEIKQSEFLMLQGK........................
A0A0M3LP85_9CAUD/1-191              .............................................................................MKFRFFKGDITQEPLKSIYADYQVSKEERKD...KLNAIL.....EKY...PFN..DG..LISRSgwfhRIVIGIACKATN-.ISQVLDVKGFKVGKFNDEFYLV.KPDKRYEKGKELAEDFKA....I....NEIYEKHRDFSPYILKRLNMLYFVSDFSysptSGRSY.LAVA...GIC.......ENTLLV.EMPMPIDKND-EPFPEIAEGLVEIKESEFLAIQGK........................
D2TQ40_CITRI/3-192                  .............................................................................IKYRYFK--MNEHDSRHYHREWLDSVGRERQ...KLIDDFl..snQNA...RGY..RC.sWYCGD....FFVKSILVHEDVD.VGRNKRVLSDKFDEDGRTLFSV.TPDRRFREGKKLNKALNI....L....NEKLKQLPAFSTWMVNKLDCYFEVFGVS....NGRTV.MACS...SAGfy...gdKGAVVV.RIPVGESDNAFSP-EKLHPSLMAIKHSEFIAITEE........................
A0A0C4UQZ6_9CAUD/4-184              ...........................................................................ka--YAYFK--LSDAAANGYTIRWLKDVSVKRD...KIICSL.....QRA...FGA..DG.vSLVSN....RGYERVECIWMNQlAPELWRGKSDGLFIGGFQFYGV.VPDITTPEGRNNATLIQE....H....EEQLRKYPTFPVWLCNELGVDVV-PNMF....DLKSV.WTMH...HSR.......DGFGILfEVCLL-DGEVKGP---VPAECQRIKHSEFVALTEE........................
A0A085HHD7_9GAMM/6-200              ............................................................................k-HYDYFK--VEGEDVKAMIAKYDEIADKRQSvinDLCNKF.....EAI...GYT..DS.tGFGDK...gSFVRNLIWPADFK.FAQPMTIK-LRSYIDGKPAILA.RGKGNSKEGRAFNKSLDAaiadC....NKQLATLPSWQAYIIEHYDVMKTGIGGS....SGLGL.AMLT...TYGgky.pgrDDCLLF.AIPNNKNEK--------------------------rhgkitvpenfqkltygqfyditn
A0A4D6E033_9CAUD/6-203              .........................................................................khyd----YYM--VEGDDVKKLIDTYDDIKNRRNE...ILGDAM.....KKVgaiAFTttRS..WGAVG...cGLLESFVWSKQFE.FPCQVTIKREDFWEGQR-VIVA.RGKGNTKDGREYNKKLDA....VmreaNEKLKLLPEWKDYIVNHYGIARTGIGEQ....SGRGFgFAML...STYggkhpqkDDCLIF.AVPNTKDEGHGQV--TIPDNFKQITYG--------qfydians................
A0A7S7YC53_9CAUD/4-194              ............................................................................r-DYRFYK--ISKEATEQIKKETDEIQAKRQK...LLNEAIesvgaEGV...SFS..NS..WGENG....TTIRAFAFAVDKE.FDFAVKEI-----HRTSELRVI.RAKANSKKGKEFNATLDAakdeL....NKKLKDLPCFKDYIINKFDIQCCSISQH...gSGAGM.RMLE...TIVgyp.qtdKSFLIC.AIPNHERGMDKQ--PNIPDCFEEITYG--------vfydlsn.................
A0A0K1LJK8_9CAUD/5-193              ...........................................................................kh--YDYFK-YENKELQPKYNDEIGSKRTESLR...KMLEGS.....GAL...AYT..SSssWGG-V....ETVRELVYPYETE.LKDLPHVMNIRSDRYDGQRVVVlRGKLNSKAGKDFNKWINQ....A....RDEIKDLPDFKSWVIETLDVNRTGLGGAh..sSGRGI.AMLStdfGMR.......DGVYLF.RIPKDSCDGV-SGTSEVPEGFKSI-----------sygqwydive..............
Y1487_HAEIN/4-186                   .............................................................................IQFRYFKGVMTKEPLKTIIDTWYKLRAERDK...KLTNIF.....NTI...PFY..ES..WLGDE....TSIFGIVCSYDNPaRDEAVLTKGYRTEDYKG-KCVV.KPDRRYKVGKDFDKKLQA....I....RQILKEAPDFSSYSLKELGMYLLVGNFS....--RLY.FSVS...GVQ.......DDIYIA.KIPVKEQGNFGDDFLEIHECLTEIKESEFLSIQG-l.......................
#=GC seq_cons                       ..............................................................................pacaFK..lstEshcphhtpatc.ptcRpc...cLsshh.....cph...sah..cu..hhsss....phltulshthcpp.hsphhcsKs.+h.phssphhll.+sctpoKpGKchNcplpu....l....p-hLcphPsFssallc+Lslthhshstp....sG+uh.hsls...uhs.......cshlls.plPsppsststps.splP-shpcIKpSEhl.h...........................
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