GenomeNet

Database: Pfam
Entry: DUF5603
LinkDB: DUF5603
Original site: DUF5603 
#=GF ID   DUF5603
#=GF AC   PF18231.5
#=GF DE   Domain of unknown function (DUF5603)
#=GF AU   Smart A;0000-0002-6965-5633
#=GF SE   ECOD:EUF04039
#=GF GA   25.00 25.00;
#=GF TC   81.50 80.70;
#=GF NC   24.10 23.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   28358477
#=GF RT   Structural Study on the Reaction Mechanism of a Free Serine
#=GF RT   Kinase Involved in Cysteine Biosynthesis.
#=GF RA   Nagata R, Fujihashi M, Kawamura H, Sato T, Fujita T, Atomi H,
#=GF RA   Miki K;
#=GF RL   ACS Chem Biol. 2017;12:1514-1523.
#=GF DR   INTERPRO; IPR040867;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found in the C-terminal region of free serine
#=GF CC   kinase (SerK) in the hyperthermophilic archaeon Thermococcus
#=GF CC   kodakarensis. SerK converts ADP and l-serine (Ser) into AMP and
#=GF CC   O-phospho-l-serine (Sep), which is a precursor of l-cysteine.
#=GF CC   The domain is not conserved in the ParB/Srx family. The
#=GF CC   differences between SerK and the other members of the ParB/Srx
#=GF CC   family is concentrated in the C-terminal region, which may
#=GF CC   include residues involved in the Sep binding [1].
#=GF SQ   6
#=GS A3DM02_STAMF/106-210  AC A3DM02.1
#=GS C6A2V8_THESM/101-201  AC C6A2V8.1
#=GS Q8U3S5_PYRFU/101-200  AC Q8U3S5.1
#=GS SERK_THEKO/101-200    AC Q5JD03.1
#=GS B8D503_DESA1/107-213  AC B8D503.1
#=GS F0LL72_THEBM/101-201  AC F0LL72.1
A3DM02_STAMF/106-210             TWYPAIIGSINKLLEEIKKEGIRIEECKGKDDVLKDEE...LGKYAFVIIGKNNECYKIYGSINEQKIVSKILSKLNLEGEYTLVYYGEKDEALRDLEEGKIDYLFLR
C6A2V8_THESM/101-201             TWYPAFKGDLNKVIERLKAEGLEVLEDKEAEEK---AE...RGEIAFALVG-KEKTFTIPGALNEQKKVSKVLDEMSVEGEIELIYYGLKEDAREDMEKGEIDYVFIR
Q8U3S5_PYRFU/101-200             TWYPAFKGDVNKVIERLKAEGLEVIEDEKAEEK---AE...KGEIAFALIG--EKSFAIPGGLEEQKKVSKVLDEMDQAKEIELVYYGLKEDAKADMEKGEIDYVFIR
SERK_THEKO/101-200               TWYPAFKGDLNEVVERLKKEGLEVIEDPEAEEK---AE...RGEIAFALVG--EKSFAIPGGLEEQKKVSKVLDEMSVEGKIELIYYGLKEDAREDMAKGEIDYVFIR
B8D503_DESA1/107-213             TWLPGIIGEVEPVLSEASRRGLKISMCNYDPNTLGEIDvklLEESSFIVLG-KNLCRAISGGIEGQKIVSQVLNELNMKGLFTLVYYGELSDALEDLKSGWLTYLFIR
F0LL72_THEBM/101-201             TWYPAFKGDLGKVLERLKKEGLTVEECEDAEEL---AE...KGEIAFALVG-KDKAFKILGGLKEQKIVSKVLDEMSVEGEIELIYYGLKEDAKEDMDKGEIDYVFIR
#=GC seq_cons                    TWYPAFKGDlNKVlERLK+EGLcV.EsccAEEp...AE...+GEIAFALlG.p-KsFsIsGGLcEQKhVSKVLDEMslEGEIELlYYGLKEDA+EDM-KGEIDYVFIR
//
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