GenomeNet

Database: Pfam
Entry: DUF5865
LinkDB: DUF5865
Original site: DUF5865 
#=GF ID   DUF5865
#=GF AC   PF19183.4
#=GF DE   Family of unknown function (DUF5865)
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Moenttinen H;0000-0003-2461-0690
#=GF SE   Manual
#=GF GA   26.10 26.10;
#=GF TC   26.20 27.30;
#=GF NC   25.80 25.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR043844;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of uncharacterised proteins of unknown function
#=GF CC   predominantly found in viruses.
#=GF SQ   15
#=GS S4W1I3_9VIRU/172-381      AC S4W1I3.1
#=GS A0A2U7U946_9VIRU/180-385  AC A0A2U7U946.1
#=GS A0A2U7U954_9VIRU/181-390  AC A0A2U7U954.1
#=GS A0A0B5J2Q3_9VIRU/179-388  AC A0A0B5J2Q3.1
#=GS A0A2U7U8V7_9VIRU/161-364  AC A0A2U7U8V7.1
#=GS S4VY02_9VIRU/176-383      AC S4VY02.1
#=GS A0A2U7UFR4_9VIRU/169-374  AC A0A2U7UFR4.1
#=GS A0A2U7UDA3_9VIRU/178-388  AC A0A2U7UDA3.1
#=GS A0A0B5IYC2_9VIRU/175-367  AC A0A0B5IYC2.1
#=GS S4W1A2_9VIRU/316-388      AC S4W1A2.2
#=GS S4W235_9VIRU/158-232      AC S4W235.1
#=GS S4VRG6_9VIRU/237-443      AC S4VRG6.2
#=GS S4VUJ8_9VIRU/1-114        AC S4VUJ8.1
#=GS S4VXU0_9VIRU/166-366      AC S4VXU0.1
#=GS A0A2U7UG15_9VIRU/205-414  AC A0A2U7UG15.1
S4W1I3_9VIRU/172-381                 ..FNAVKLAGGPIEAGRLARKLAKYAQDAPDAIVLVGKSLAWLPYNYDKA..KAADVPVPVIASNPLWAIGDTHLDPYDRAGVRFALLDAVVARAKAMAGhFATRDKLDEIASYIAVAMADCGLAAFDLFYVPHAATRAAV.SSGA-ADDYGDLLTLAEFGAAYGGRVITEKQIQRFYRPVTPSDATIPATPMARILAAKVDNVADLLALVDDPL-l...............
A0A2U7U946_9VIRU/180-385             ..FNAVELAGPPVEAGWLARKLVNYARDAPDALALVAGSLAALPSAVKCVgiVSADVPVPVTLSCPQWRIGCGIASPFDEAKQN--ELDAVVRRAKALAR.CGGRDRLGEIASYVATAMAGCGLAAFDLFYVPHAQTRAVA.AHHV----WGDLLTRAEFAEAYERRIVTERQIQRFYRPVAPSDPAVPVNPMARILDAGVDNVADLLDLVDDRML................
A0A2U7U954_9VIRU/181-390             ..FNAVKLAGGPIEAGRLARKLAKYAQDAPDAIVLIGKSLAWLPIHYDKA..PAVGTPVPVIASNPIYGIDDTHLDPYDRAGVRFALLDTVVTRAKTMARaFATRNKLDQIASYVATAMADCGLAAFDLFYVPHAATRAAV.SSGA-ADDYGDLLTLAEFAAAYGGRVITEKQIQHFYRPVAPSDPTVAATPMARILSAKVDNVADLLTLLDDPL-l...............
A0A0B5J2Q3_9VIRU/179-388             ..FNAVKLAGGPIEAGRLARKMAKYAQDAPDAIVLIGKSLAWLPIHYDKA..PVVGTPVPVIASNPIYGIDDTHLDPYDRAGVRFALLDTVVAKAKTMAHtFATRDKLDQIASYVATAMADCGLAAFDLFYVPHAGTRAAV.SSGA-ADDYGDLLTLAEFAAAYGGRVITEKQIQRFYRPVAPSDPTVTATPMARILSAKVDNVADLLALLDDPL-l...............
A0A2U7U8V7_9VIRU/161-364             ..FNASQLGAQPAIVENLIEELEAYADTAPDAVVLTPSGLASLDISQI--..TSTSTAVPLLTRRRLDDFLECDLNPFDRQPLGNGSVDDIVQRAKTQA-.-VEQRPLGEIATDLGRAFASGGLAAVDLFYVPAAKTGAAA.-NLARYTGRGNLLTRAEFEHLYG-RAIADAHIQAFYRPVTPCNLSQPTSPLARVLTSGCTNVADLCALLDDCD-l...............
S4VY02_9VIRU/176-383                 ..INAIELGGGPIEAERLARKLAKYAHDAPDAVVLVADGLAWLPVTA---..PAPGAHVAVVPSCPLAEIEETPLGPYGHSGHHFARLDAVVAKAKSMLGpTGDRSALGSIASYLASAMADGGLAAVDLFYVPYATSRAAV.VSGAQKGDRGHLLTLAEFQAAHGGRTVTDGHIERFYRPIVPSDPQVVFNPMGRVLLANVDNVSDLYTLLDDPA-n...............
A0A2U7UFR4_9VIRU/169-374             ..FNALQLGPQPTTVEVLIEDLDPYMRDAPDAIMLTPSGLASLTIKED--..DASQGTLPVLTRRQLNDFVECDLNPFDTDPAGNNAVDEIVATAKAQL-.-AARRPLAAIATDLGRAFASGGLAAVDLFYVPAARTRAAAdITGVNHTDYGSLLTLAEFRRTHG-RTITDAHIQAFYRPVAPADVSQPVSPLARVLSSGCTNIADLYALLDDHA-l...............
A0A2U7UDA3_9VIRU/178-388             ..FNAVALSGGPIEADRLARKLAKYAHDAPDAVVLVGGNPARLPDDVSSS..LPPNTCVPIIESFPMTDIHRTALGPYGRGCGGIRDLDMIARTAKCMAGfLDTRKNLGRVASYVASAMAGKGLAALDLFYVPQANSRIAI.ESGCYACAHGRLLTLAEFQDACGGRTITERQIHRFYRPVMPSDPSVPYNPMARILAADVDNVADLYALLDDPL-l...............
A0A0B5IYC2_9VIRU/175-367             ..FNAVELTGPPIEAGWLARKLANYAHDAPDALVLVAGGLATLPSAVKCVgiVSAHVPVPVTLSCPQWRIGCGLASPFDEAKQN--ELDAVVRRAKALVR.CGGRDRLGEIASYVAEAMAGCGLAAFDLFYVPHAQTRAAA.AHRV----WGDLLARAEFAEAYGRRIVTERQIQCFYRPVVPSDPAVPVNPMARILA------------------paagq...........
S4W1A2_9VIRU/316-388                 .c-NAIQLLGGPVCARSVARSLVKYAATHPHALVMIGEAAVALPFAPPTV..DVLARSLAV---------------------------------------.----------------------------------------.--------------------------------------------------------------------------sdtrlniarlpanrqk
S4W235_9VIRU/158-232                 ..FNAVQLGGQPAIVENRIEDLEAYADAAPNAVVLTPSGLASLDVSQI-T..SSSPQAVPLLTRRGLGDFLECDLNPFDR--------------------.----------------------------------------.--------------------------------------------------------------------------................
S4VRG6_9VIRU/237-443                 ..FNAVGLAGRPVVARYLARNLAKYALDAPDALVLVDNGLALLPDSLQCArvAALGVPIPVTLSCPLWMIAESEAGPIATKDRMHYLGDMVKGIQTTHV-.TLERADLGAVAERAARAMIRSGLAAFDLFYVPVAATRAAA.AHIR----HGVLMTLAEFGQAHGGRVITEKHIQRFYRPVAPGNPEMTPSAMARILDAGVDNVADLLALVDDPG-l...............
S4VUJ8_9VIRU/1-114                   mq------------------------------------------------..------------------------------------------------.AAARRPLGEVATDLGRAFASGGLAAVDLFYVPAAKTGAAA.-NLARYVGDGTLLTRAEFEHFHG-RTITDAHIRTFYRPVAPCDVSQPTSPLARVLSSGCTNVADLCALLDDCD-l...............
S4VXU0_9VIRU/166-366                 ..FNAIKLGPQPTCVEMLIEDLEAYVRDAPDAVVLTPSGLASLDSEP---..GAMTKVVTVMTRRPLDDFLDCDLNPFAPCEPVNVAVDAIVARAKAQA-.-ASGCPLADIATDLGRAFASGGLAAVDLFYVPAAQTAEEV.---AEKGDRGSVLTLAEFERAHG-RTVADAHIGVLYRPVAPGDLSEPVSPLARVLSSGCTNVADLYALLDRQR-l...............
A0A2U7UG15_9VIRU/205-414             ..FNAVALSGGPIDAARLARKLAKYAEDAPDALVLVGGSLAWMSDDQKLA..SAPGAYVPVLASCHLSHLDKTPLCPYGPTGTGHASVNHVVDIAKSMFGtMTRRDDLGRVATYVASAMADGGLAAFDLYFVPRVHSRAVA.AAGF-RPAYGELLTLAEFQAAHGGRTITEGQISHFYRPVMPSDASVVYNGMARILAANVDNVTDLYALLDDPR-r...............
#=GC seq_cons                        ..FNAVpLuGsPlpAtpLARcLspYAcDAPDAlVLlusuLAhLP.s.p.s..sussssVPVlsSpPlhclt-stLsPascssht.h.lDtlVtpAKshs..husRctLupIAohlApAMAssGLAAhDLFYVPtApTRAAs..sts.hssaGsLLTLAEFttAaGtRsIT-tpIppFYRPVsPuDsohsssPMARlLuusssNVADLhALLDDsh.L...............
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