GenomeNet

Database: Pfam
Entry: DUF5875
LinkDB: DUF5875
Original site: DUF5875 
#=GF ID   DUF5875
#=GF AC   PF19203.4
#=GF DE   Family of unknown function (DUF5875)
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Moenttinen H;0000-0003-2461-0690
#=GF SE   Manual
#=GF GA   26.50 26.50;
#=GF TC   27.90 156.60;
#=GF NC   25.10 19.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR043658;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a family of uncharacterised proteins of unknown function
#=GF CC   predominantly found in Iridoviridae.
#=GF SQ   8
#=GS Q5YFF4_9VIRU/27-254     AC Q5YFF4.1
#=GS A0A0D3R335_9VIRU/1-228  AC A0A0D3R335.1
#=GS Q6YH33_9VIRU/1-228      AC Q6YH33.1
#=GS C3RWV1_FRG3V/1-223      AC C3RWV1.1
#=GS A0A3Q9T8F8_9VIRU/1-228  AC A0A3Q9T8F8.1
#=GS I2BFW3_9VIRU/1-228      AC I2BFW3.1
#=GS 096R_FRG3G/1-223        AC Q6GZM9.1
#=GS A0A6M8PG54_RTRV/1-223   AC A0A6M8PG54.1
Q5YFF4_9VIRU/27-254                MWTEFVNHLNDIMCMSVCRKYPVCMQHMRKLKSNDLTSVEQNIEMESFRKFILDNRPWPPKSsadMKEQGFTSTISECHIHIPNIFNLFPNRQKLTELLERLAILLEVENYAEedAVMKKsgSCQGYLQNILKDVKNIPNLETMNIGDILQCPDIHKMANKVMCNIQDGVINHAELAGEILS-MIEPVKDELPMGEMGEMVCFLEKIKNGTPVNLEAVAPIIEKFN---------ipl
A0A0D3R335_9VIRU/1-228             MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKAADLSQESKDSETAAMTEYISSNRPWGQGS...YPSKGYVSPVSGCTLHFGNVSTLHPDSAALDGRLREMAEVLGVQDYAS..APVRV..SSTGYIDKVKSMVYEIDGLESMSMADLMGCTQLHQLAGKVASDIQSGAVNHREFAGEILSSMVGPLRELLPKEDCDSIVSILEKVRDGEAVSADEVIPLMNKFQEAGFVPRVL...
Q6YH33_9VIRU/1-228                 MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKVADLSQESKDSETAAMTEYISSNRPWGQGS...YPSKGYVSPVSGCILHFGNVSTLHPDSAALDGRLREMAEVLGVQDYAT..APVRV..SSTGYIDKVKGMVYEIDGFESMSMADLMGCTQLHQLAGKVASDIQSGAVNHREFAGEILSSLVGPLRELLPKEDCDSIVSILEKVKDGEAVSAEEVIPLMNKFQEAWLVPGVL...
C3RWV1_FRG3V/1-223                 MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKVADLSQESKDSEMAAMTEYISSNRPWGQGS...YPSKGYVSPVSGCTLHFGNVSTLHPDSAALDGRLREMAEVLGVQDYAS..APVRV..SSTGYIDKVKAMVYEIDGVESMSMADLMGCTQLHQLAGKVASDIQSGAINHRDFAGEILSNMVGPLRELLPKEDCDNIVSILEKVRDGEAVSADEVFPLITKFQEAG------f..
A0A3Q9T8F8_9VIRU/1-228             MWSRFIAILSQSMPIGVCRKYPVCQTHLKKLKAADLSQESKDSETAAMTEYISSNRPWGQGS...YPSKGYVSPVSGCTLHFGNVSTLHPDSAALDSRLCEMAEVLGVQDYAS..TPVRV..SSTGYIDKVKGMVYEIDGLESMSMADLMGCTQLHQLAGKVASDIQSGAVNHREFAGEILSSLVGPLREFLPKEDCDSIVSILEKVRDGEAVSAEEVIPLMNKFQEAGLVPGVL...
I2BFW3_9VIRU/1-228                 MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKAADLSQESKDSETAAMTEYISSNRPWGQGS...YPSKGYVSPVSGCTLHFGNVSTLHPDSAALDGRLREMAEVLGVQDYAS..APVRV..SSTGYIDKVKGMVYEIDGLESMSMADLMGCTQLHQLAGKVASDIQSGAVNHREFAGEILSSLVGPLRELLPKEDCDSIVSILEKVRDGEAVSAEELIPLMNKFQEAGLVPGVL...
096R_FRG3G/1-223                   MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKVADLSQESKDSEMAAMTEYISSNRPWGQGS...YPSNGYVSPVSGCTLHFGNVSTLHPDSAALDGRLREMAEVLGVQDYAS..APVRV..SSTGYIDKVKAMVYEIDGVESMSMADLMGCTQLHQLAGKVASDIQSGAINHREFAGEILSNMVGPLRELLPKEDCDSIVSILEKVRDGEAVSADEVFPIITKFQEAG------f..
A0A6M8PG54_RTRV/1-223              MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKAADLSQESKDSEMAAMTEYISSNRPWGQGS...YPSKGYVSPVSGCTLHFGNVSTLHPDSAALDGRLREMAEVLGVQDYAS..VPVMV..SSTGYIDKVKGMLYEIDGIESMSMADLMGCTQIHQLAGKVASDIQSGAVNHREFAGEVLNSMVGPLRELLPKEDCDSIVSILEKVRDGEAVSADEVLPLINKFQEAG------f..
#=GC seq_cons                      MWSQFIAILSQSMPIGVCRKYPVCQTHLKKLKuADLSQESKDSEhAAMTEYISSNRPWGQGS...YPSKGYVSPVSGCTLHFGNVSTLHPDSAALDGRLREMAEVLGVQDYAS..APVRV..SSTGYIDKVKuMVYEIDGlESMSMADLMGCTQLHQLAGKVASDIQSGAVNHREFAGEILSSMVGPLRELLPKEDCDSIVSILEKVRDGEAVSA-EVlPLhNKFQEAG.........
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