GenomeNet

Database: Pfam
Entry: DUF5950
LinkDB: DUF5950
Original site: DUF5950 
#=GF ID   DUF5950
#=GF AC   PF19375.3
#=GF DE   Family of unknown function (DUF5950)
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   23.90 23.90;
#=GF TC   24.30 77.40;
#=GF NC   21.70 21.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR045994;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0001576) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, RiPP (ribosomally
#=GF CC   synthesised and post-translationally modified peptide).
#=GF SQ   13
#=GS A0A238VNM9_9ACTN/20-122  AC A0A238VNM9.1
#=GS A0A2P4UCX4_9ACTN/20-122  AC A0A2P4UCX4.1
#=GS A0A372JNN6_9ACTN/1-103   AC A0A372JNN6.1
#=GS F4XIP5_9CYAN/24-126      AC F4XIP5.1
#=GS A0A853BJU6_9ACTN/15-117  AC A0A853BJU6.1
#=GS A0A326UM79_THEHA/17-119  AC A0A326UM79.1
#=GS A0A840NF74_9PSEU/16-118  AC A0A840NF74.1
#=GS A0A1T4SL45_9ACTN/15-117  AC A0A1T4SL45.1
#=GS A0A6I5VMB4_9ACTN/11-107  AC A0A6I5VMB4.1
#=GS D3D9F8_9ACTN/14-109      AC D3D9F8.1
#=GS A0A4R5BUC2_9ACTN/16-118  AC A0A4R5BUC2.1
#=GS A0A7W8QHT7_9ACTN/15-117  AC A0A7W8QHT7.1
#=GS A0A543CCG8_9ACTN/15-117  AC A0A543CCG8.1
A0A238VNM9_9ACTN/20-122             VRQIQFLMVLCSVLPPDGKAREMLRLALDVRNEEFPDGVEPIRDL.HPQ.ATKTWLEFFWTRVGISPEERELIDWQNDKPSMDIAVEELQEAERRLGIRLAPRT-v....
A0A2P4UCX4_9ACTN/20-122             VRQLQHLMVLCELLPPGSRLHEALTIALSINEPSLPGRITPVRDL.HPL.TTKTWLESLWDPDLISPEEMELVAWQNNKAKMDAAVEEMQKIERRIGIRLATEK-i....
A0A372JNN6_9ACTN/1-103              MRQIQHLLVLCSLLRRDSPLARILTTALELDPVPMAARATPAPSV.HPQ.ETKDWLESFWDPAALTPDEVEVAAWQNNITEMVTAVEEIHAIEKLIDIRLTSEK-a....
F4XIP5_9CYAN/24-126                 IRQIQILMLLCLCLSSEGTLYDLLKMALATPGHQTLNRVTPPEDI.SID.GLFEWLGKLFGEAEVTEGERDLILWQNDIKNMWPAISELRAIEEKLGFKITIEKK.....
A0A853BJU6_9ACTN/15-117             IRRIQQLVVLCSLLPPDGKLRELLETALAVHEEPLLAHVGPVPDL.HPH.AVKGWLESFWLRDDITPEERQVVDWQSDSDNMGAAMRELSNVEQQTGMRLIAEK-s....
A0A326UM79_THEHA/17-119             IRQIQMLLVLLSHLPPDSMLREIFEHAMALPHDPWAARVTPVTDT.SFY.GLKTWLESLWARDGLSADEQRLVDWQRSGKNIEIAVRELKAIQQLTGFKFGIVA-l....
A0A840NF74_9PSEU/16-118             IRQIQELVLFCSLLPPDGKLREVLELALALHEEPMLSRLRPVTDL.HPF.STKEWMESLWMHADLPANEKEVVAWQNKDENMSPALVELKNVEQQLGISLVAR--lr...
A0A1T4SL45_9ACTN/15-117             IRQIQSLMILCSLLPPDGKLREALQIALALHEEPLLAQITPISDL.HPH.TAKEWLETLWRRDDLSPQVKELVDWQSNSDNMSAAIQELRNVEQQSGMKLVAVK-p....
A0A6I5VMB4_9ACTN/11-107             IRYLQGLAVLLSCFPKGGKVHEFFQLALDAEGPAVLARANVDAAL.DDDaELKAWLEKLWAPEGLHASEQGLVEWQNNSDNMTAALDELRAVV------------gnfgs
D3D9F8_9ACTN/14-109                 IRQIQGYLVLLSSLPENGKLREAFELALDVRGRPVLERLRRPTDPdSRE.SYSEWLAEHWAAENLTPDEQPLVDWQKDPANITTAIGEWKALT------------anln.
A0A4R5BUC2_9ACTN/16-118             IRRIQHLMALCSLLPPDGKLREVLELALSLNEETLLPHVEPLADL.HPH.AVKTWLECLWIHDGLGPEGKELLAWQNTSDNMAAAMRELRNVETQTGITLAAEA-t....
A0A7W8QHT7_9ACTN/15-117             IRRVQQLMVVCSLLPDDGKLREALQAALALPDRPVLDRTPPVPDL.HPH.RLKGWLESIWLSDSPSPEEKALVDWQSDSDNMTAAMRELDEVERHIGARLSIV--ld...
A0A543CCG8_9ACTN/15-117             IRRVQQLMIFCSLIPPDGKLREVLSLALSLHEEPVLSRVTPMSDT.QPH.AAKAWLEAIWLENGLSAEEKELVRWQNDSENMAAAIAELRNAEGQLGMRLVAET-t....
#=GC seq_cons                       IRQIQpLhVLCSLLPPDGKLREhLplALulcccPlLuRlsPlsDL.HPc.usKsWLEslWtc-sLoP-E+-LVcWQNsscNMssAlcEL+slEpphGh+Lssct.s....
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