GenomeNet

Database: Pfam
Entry: DUF5962
LinkDB: DUF5962
Original site: DUF5962 
#=GF ID   DUF5962
#=GF AC   PF19387.3
#=GF DE   Family of unknown function (DUF5962)
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   25.00 25.00;
#=GF TC   25.90 138.70;
#=GF NC   22.90 20.00;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR046006;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0000498) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, RiPP (ribosomally
#=GF CC   synthesised and post-translationally modified peptide).
#=GF SQ   15
#=GS A0A380JZ71_9STRE/1-94  AC A0A380JZ71.1
#=GS G5K338_9STRE/1-81      AC G5K338.1
#=GS A0A347WMG4_9LACT/1-99  AC A0A347WMG4.1
#=GS F5X6Z4_STRPX/1-99      AC F5X6Z4.1
#=GS A0A7G3MMN8_9CAUD/1-99  AC A0A7G3MMN8.1
#=GS A0A7X6N0Q9_9STRE/1-94  AC A0A7X6N0Q9.1
#=GS A0A380KBD9_9STRE/1-87  AC A0A380KBD9.1
#=GS A0A3L8G9B0_STRIN/1-99  AC A0A3L8G9B0.1
#=GS A0A1G6ADN9_9STRE/1-99  AC A0A1G6ADN9.1
#=GS A0A4Y9J445_9LACT/1-99  AC A0A4Y9J445.1
#=GS A0A7X6S1G4_9STRE/1-99  AC A0A7X6S1G4.1
#=GS Q8DZ41_STRA5/1-99      AC Q8DZ41.1
#=GS A0A7G3MII7_9CAUD/1-99  AC A0A7G3MII7.1
#=GS A4VUY8_STRSY/1-99      AC A4VUY8.1
#=GS G5KG35_9STRE/1-99      AC G5KG35.1
A0A380JZ71_9STRE/1-94             mt-------VYYQLENMLVAGFKSQEEYDRYQALKRDYEGESEDYSFSIREITNQIEIICKTSENDFPDLEEGILADYMELVAQLKRYDTKQADKYLRMVR.......
G5K338_9STRE/1-81                 ..MTQTVEDMRYQLEEWLAQGFTSPEDRANYQVLKEEYEDETFDYSFSKRELTGQLDLIITTRENDFPDLEEEQAK-------------------------yyrkqln
A0A347WMG4_9LACT/1-99             ..MTQTLEEMRYQLEEWLSQGFTSSEDRANYQTLKEQYEDETFDYSFSRREITGQLELIITSRENDFPSLDEVTKTEYLDLVAQLDDLDKRQADYYRKQL-a......
F5X6Z4_STRPX/1-99                 ..MAQTLEEMRYQLEEWLSQGFISPEDRANYQTLKERYEDETLDYSFSKREITGQLEFIITTRENDFPELDEVTKAEYLDLVAQLDELDQEQASYYRKQL-g......
A0A7G3MMN8_9CAUD/1-99             ..MGQTVEEMRYQLEEWLSQGFTSSEDRANYQTLKEQYEDETFDYSFSRREITGQLEIIITSRENDFPSLDKVTKAEYLDLVAQLDDLDKRQADYYRKQL-a......
A0A7X6N0Q9_9STRE/1-94             mt-------VYYQLENMLVTGFKSQEEYDRYQALKRDYESETEDYSFSIREITNQLEIICQTSDNDFPNLSEALMIDYLELVGELRRYDTKQADRYLRMVR.......
A0A380KBD9_9STRE/1-87             ..MTQTVEELRYQLEEWLALGFISPEDRANYQALKEQYEDETLDYSFSKREIIGQLEVIITTRENDFPDLDEVTKEEYLDLVAQLG---------------nms....
A0A3L8G9B0_STRIN/1-99             ..MTKTVEEIRYQLEQWLAQGFTSPEDRANYQALKEQYEDETLDYSFSKREITGQLELIITSRENDFPNLDEVTKAEYLDLVAQLDDLDKRQADYYRKQL-a......
A0A1G6ADN9_9STRE/1-99             ..MTQTVEDIRYQLEEWLAQGFTSTEDRANYQALKEQYEDETLDYSFSKREIIGQLEVIITTRENDFPDLDDVTKEDYLDLVAQLDDLDKGQADYYRKQL-a......
A0A4Y9J445_9LACT/1-99             ..MAQTLEEMRYQLEEWLTQGFTSPEDRANYQTLKEQYEDETLDYSFSKREITGQLELIITSRENDFPELDEVTKAEYLDLVAQLDDLDKRQADYYRKQL-a......
A0A7X6S1G4_9STRE/1-99             ..MTQTVEDIRYQLEEWLAQGFTSSEDRANYQALKEQYEDETLDYSFSKREIIGQLEVIITTRENDFPDLDEVTKGEYLDLVGQLDDLDKGKADYYRKQL-a......
Q8DZ41_STRA5/1-99                 ..MTQTLEEMRYKLEEWLAQGYTSPEDRANYQTLKEQYEDETFDYSFSKREITGQLELIIKSRENDFSNLDEVTKTEYLDLVTQLDELDQEQANYYRKQL-a......
A0A7G3MII7_9CAUD/1-99             ..MTQTLEEMRYQLEEWLAQGYTSPEDRANYQTLKEQYEDETLDYSFSRREITGQLELIITSRENDFPNLDEVTKAEYLDLVAQLDDLDKRQADYYRKQL-a......
A4VUY8_STRSY/1-99                 ..MAQTLEEMRYQLEEWLAQGFTSPEDRANYQALKEQYEDETLDYSFSKREITGQLELIITSRENDFPSLDEVTKAEYFDLVAQLDDLDKEQASYYRKQL-s......
G5KG35_9STRE/1-99                 ..MTQTVEDIRYQLEEWLAQGFTSSEDRANYQVLKEQYEDETLDYSFSKREIIGQLEVIIMTRENDFPDLDEVTKEEYLNLVAQLDDLDKGQADYYCKQL-a......
#=GC seq_cons                     ..MTQTlEEhRYQLEEWLAQGFTSsEDRANYQsLKEQYEDETLDYSFSKREITGQLElIIToRENDFPsLDEVTKsEYLDLVAQLDDLDKcQADYYRKQL.A......
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