GenomeNet

Database: Pfam
Entry: DUF5965
LinkDB: DUF5965
Original site: DUF5965 
#=GF ID   DUF5965
#=GF AC   PF19390.3
#=GF DE   Family of unknown function (DUF5965)
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   25.00 25.00;
#=GF TC   33.10 125.70;
#=GF NC   23.60 19.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR046009;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0000561) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, RiPP (ribosomally
#=GF CC   synthesised and post-translationally modified peptide).
#=GF SQ   13
#=GS F5X6Y9_STRPX/1-73      AC F5X6Y9.1
#=GS A0A3L8G9C8_STRIN/1-73  AC A0A3L8G9C8.1
#=GS A0A7X6S2J6_9STRE/1-75  AC A0A7X6S2J6.1
#=GS A4VUW7_STRSY/1-73      AC A4VUW7.1
#=GS A0A7X6MYA8_9STRE/1-74  AC A0A7X6MYA8.1
#=GS A0A7G3MMH7_9CAUD/1-73  AC A0A7G3MMH7.1
#=GS G5K343_9STRE/1-74      AC G5K343.1
#=GS G5KG30_9STRE/1-75      AC G5KG30.1
#=GS Q8DZ45_STRA5/1-73      AC Q8DZ45.1
#=GS A0A1G6AF86_9STRE/1-75  AC A0A1G6AF86.1
#=GS A0A347WMG8_9LACT/1-73  AC A0A347WMG8.1
#=GS A0A4Y9J670_9LACT/1-73  AC A0A4Y9J670.1
#=GS A0A7G3MHT6_9CAUD/1-73  AC A0A7G3MHT6.1
F5X6Y9_STRPX/1-73                 MSVIKRLAEKVARQEEKVSRETEKLEHYRDQLQTAMYSTFIKRQQSSQLSFHEALEQAFGK-ETT.LHP.DYRNED
A0A3L8G9C8_STRIN/1-73             MSVIERLAEKVARQEEKVSRETEKLEHYRDQLQTAMYSTFIKRQQSSQLSFHEALEQAFGK-ETT.LHP.NYRNED
A0A7X6S2J6_9STRE/1-75             MSVIERLAERVARQEEKVAKETEKLETYRSQLQTAMYQTFIKRQQNSPWTFDEALTQAFGQDEQKpIPS.DNRNEE
A4VUW7_STRSY/1-73                 MSVIERLAEKVARQEEKVSRETEKLENYRDQLQTAMYSTFIKRQQSSQLSFHEALEQAFGK-EST.PPP.DYRNED
A0A7X6MYA8_9STRE/1-74             MSVIERLAERVARQEDKVAKETEKLETYRNQLQTAMYQAFIKRQQNSPWTFDEALTQAFGQEEQP.TLS.DNRNEE
A0A7G3MMH7_9CAUD/1-73             MSVIERLAEKVARQEEKVSRETEKLEHYRDQLQTAMYSTFIKRQQSSQLSFHEALEQAFGK-ETT.LHP.NYRNED
G5K343_9STRE/1-74                 MSVIEHLADRVARQEEKVAKETERLDSYREQLQSAMFSTFIKRQKTSHLSFDEALEQAFGKEEYQ.VDL.DNRNEE
G5KG30_9STRE/1-75                 MSVIERLAERVARQEEKVAKETENLETYRSQLQTAMYSTFIKRQQNSPWTFDEALTQAFGQEEQE.LKLsDTRNEE
Q8DZ45_STRA5/1-73                 MSVIERLAEKVARQEEKVSRETEKLEHYRDQLQTAMYSTFIKRQQSSQLSFHEALEQAFGK-ETT.LHP.NYRNED
A0A1G6AF86_9STRE/1-75             MSVIERLAERVARQEEKVAKETEKLETYRSQLQTAMYQAFIKRQQNSPWTFDEALTQAFGQDEQKpIPS.DNRNEE
A0A347WMG8_9LACT/1-73             MSVIERLAEKVARQEEKVSRETEKLEHYRDQLQTAMYSTFIKRQQSSQLSFHEALEQAFGK-ETT.LHS.NYRNED
A0A4Y9J670_9LACT/1-73             MSLIERLAEKVARQEEKVSRETEKLEHYRDQLQTAMYSTFIKRQQSSQLSFHEALEQTFGK-ETT.LHP.NYRNED
A0A7G3MHT6_9CAUD/1-73             MSVIERLAEKVARQEEKVSRETEKLEHYREQLQTVMYSTFIKRQQSSQLSFHEALEQAFGK-ETT.LHP.NYRNED
#=GC seq_cons                     MSVIERLAEKVARQEEKVSRETEKLEpYR-QLQTAMYSTFIKRQQSSQLSFHEALEQAFGK.EoT.L+s.sYRNED
//
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