GenomeNet

Database: Pfam
Entry: DUF6008
LinkDB: DUF6008
Original site: DUF6008 
#=GF ID   DUF6008
#=GF AC   PF19471.3
#=GF DE   Family of unknown function (DUF6008)
#=GF AU   Williams LS;0000-0001-5551-8526
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   27.00 27.00;
#=GF TC   213.70 213.40;
#=GF NC   26.00 25.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   15797213
#=GF RT   The neocarzinostatin biosynthetic gene cluster from Streptomyces
#=GF RT   carzinostaticus  ATCC 15944 involving two iterative type I
#=GF RT   polyketide synthases.
#=GF RA   Liu W, Nonaka K, Nie L, Zhang J, Christenson SD, Bae J, Van
#=GF RA   Lanen SG, Zazopoulos E, Farnet CM, Yang CF, Shen B;
#=GF RL   Chem Biol. 2005;12:293-302.
#=GF DR   INTERPRO; IPR046050;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0000112) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, polyketide. This family
#=GF CC   includes a  protein from the neocarzinostatin biosynthetic gene
#=GF CC   cluster from  Streptomyces carzinostaticus subsp.
#=GF CC   neocarzinostaticus [1] and  appears to be restricted to
#=GF CC   Actinobacteria. 
#=GF SQ   29
#=GS A0A1Q5E1E3_9ACTN/7-255  AC A0A1Q5E1E3.1
#=GS A0A542DD10_AMYCI/1-234  AC A0A542DD10.1
#=GS A0A8J3FLB7_9ACTN/1-247  AC A0A8J3FLB7.1
#=GS K0EPT6_NOCBR/4-237      AC K0EPT6.1
#=GS A0A1C4HUA9_9ACTN/1-272  AC A0A1C4HUA9.1
#=GS A0A3N4Z0W7_9MICO/1-218  AC A0A3N4Z0W7.1
#=GS A0A2S9PTM3_9ACTN/3-259  AC A0A2S9PTM3.1
#=GS A0A370H1P3_9NOCA/1-236  AC A0A370H1P3.1
#=GS A0A2A4KMJ0_9ACTN/1-249  AC A0A2A4KMJ0.1
#=GS A0A0G3UZG4_9ACTN/7-257  AC A0A0G3UZG4.1
#=GS H5XBZ0_9PSEU/1-243      AC H5XBZ0.1
#=GS A0A221NTG9_9ACTN/1-245  AC A0A221NTG9.1
#=GS A0A7G1KSF8_9NOCA/1-237  AC A0A7G1KSF8.1
#=GS A0A2T0LNA6_9PSEU/1-235  AC A0A2T0LNA6.1
#=GS A0A1Q5NAD1_9ACTN/1-251  AC A0A1Q5NAD1.1
#=GS A0A1Q5JR88_9ACTN/1-274  AC A0A1Q5JR88.1
#=GS C7Q9W6_CATAD/1-235      AC C7Q9W6.1
#=GS A0A238Y3T6_9PSEU/1-232  AC A0A238Y3T6.1
#=GS C7Q389_CATAD/7-243      AC C7Q389.1
#=GS D6AAF8_STRV1/1-263      AC D6AAF8.1
#=GS A0A2V4BA79_9PSEU/1-240  AC A0A2V4BA79.1
#=GS A0A101SQ49_9ACTN/1-258  AC A0A101SQ49.1
#=GS A0A6B2DPW5_9PSEU/1-233  AC A0A6B2DPW5.1
#=GS A0A7X6LAX7_9NOCA/1-235  AC A0A7X6LAX7.1
#=GS A0A3N6HT35_9ACTN/2-150  AC A0A3N6HT35.1
#=GS A0A1I1B783_9PSEU/1-234  AC A0A1I1B783.1
#=GS A0A2S1Z8C4_9ACTN/1-246  AC A0A2S1Z8C4.1
#=GS A0A7W9PKV8_9NOCA/1-234  AC A0A7W9PKV8.1
#=GS G0FXR3_AMYMS/1-231      AC G0FXR3.1
A0A1Q5E1E3_9ACTN/7-255             .............mpgm---.ESTASTVDTLGAVLFIGWAVAMWGAVAVLAVGNRRPLRPGLYKVAVALIGIGVIGQIGHFQEHVAQAAYWIGHPYDPAWMTPWGNSFSRGFGQVDASKPSLGMEILHLIGNFIFLAGLVGIVQITHRVAGQlKSRKWARMGVWMQGIHGLEHVVLTLSVALGASRAIGLSTWFGAIEPGPALATYRIWWHFVANAVGTTILGIAVYHLWKEKRAVRASFgltedapaaA-------------tpaeddpartpepagr................
A0A542DD10_AMYCI/1-234             ...............mg---.-GTPSTLDTLGAVLLGLWAVVMWAAVAVLAYANRGTVRPWLFRASAGVIILGIVGQLGHVQEHFAQVGYWVAHPNERPWMTPWGTGLADGLGVVDMSKPSLGMEILHMTGNFIFLAGLVGVMLITKRALNT.RARKWGRMGVWMQGIHGIEHVVLTLSVALGANQAIGMSTFFGFLDPGPGLWTYRIWWHFVANVVGTVIFAIAVYHLWRERHTVEATY.........RTRGTS--------tapagsaep.......................
A0A8J3FLB7_9ACTN/1-247             .................MAH.HQAASVIDIAGASLLLLWAMAMWAAVAVLAYANRRTVRPWIFRGSAAVIILGIVGQLGHIQEHVAQTGYWVMHSGQQPWMTPWGDGLAAGFAGADPGKPSLGMEILHLIGNFIFLAGIAGVMIITRHALGS.RARRWARMGVWMQGIHGLEHLALTLSVALGASQAIGLSTWFGVLEPGPGLWTYRIWWHFLANVLGSVIFAVALVHLWRERRHVAATF.........DVGSHA--------paspsgwrladpsdpsdqsd............
K0EPT6_NOCBR/4-237                 .................MHH.GAGATGWEIAGAIAMLSWMVVMWAAVAVLIVAMRRGVRPWMYRGSLGVIGLGVLAQIGHFQEHVLQVGYWLGHPNSPAWMTPWGTGLANGFGQVDTSKPTLGMEILHLAGNFQFLAGLVGVALITHRALAS.KARKWGRMGVLMQGIHGLEHIALTVSVALGAK-AIGLSTWFGLLDPGPGLWTYRVWWHFGANVVGTTIFVLALIHLWRERATIEATF.........RTPSERSATIAE--tp..............................
A0A1C4HUA9_9ACTN/1-272             .....mdhsgmpgmpgm---.GPTVSTVDTLGAVLFIGWTVAMWVAVAVLAIGNRRAVRPWMYKLAVALIGVGVVSQLGHFQEHVTQAGYWVAHPYAPAWMTPWAESFSRGLGQVDSSKPALGMEILHLTGNFMFLAGLVGVVQITHRVTGElKARKWARMGVWMQGIHGLEHVALTLSVALGASRAIGLSTWFGAIEPGPALVTYRVWWHFVANLVGTFILVTAVYHLWKEKRRVRESFglge.pevvA-------------atpdaseplsphgeddpapadddlsraenepp
A0A3N4Z0W7_9MICO/1-218             .................---.--------------MLGWTLVMWAAIVVLAVSHRRRVETWMLRTATGIVLLGVIGQIGHMLEHVAQAGYWIMNPYAPAWMTPWGTGLANGFGVVDPTKPSLGMEILHFVGNMLFLAGIVGVMQLTRRVTYRsTARKCATMGVWMQGIHGVEHLVLMLSVWLGAPTAIGLSTWFGLIDPGVALSTHRIWWHFLANVLGSAIFGLALYHLWREHPRIAASF.........-DTPTPAPA-----rslap...........................
A0A2S9PTM3_9ACTN/3-259             ..hgpgmhqsmpgmpgm---.GSAVSSVDTAGAVLFIAWAVAMWLAVAVLAWANRGPVRPWLYKTAVGLIGLGVVGQIGHFQEHVAQAGYWIAHPYSPAWMTPWADSLARGMGQVDMTKPSLGMEILHLTGNFIFLAGLVGIVQITGRTARHlKSRKLATMGVWMQGFHGIEHIVLTVSVAMGASRAIGLSTWFGVIDPGPALTTYRVWWHFVFNLVGTAILGLSLYHLWKEKREVKAGF.........EPEAR---------gdepvsagsdaseregvl..............
A0A370H1P3_9NOCA/1-236             .................MEH.TAEASGWAIAGAIGMVLLMVVMWAGVAVLFVGLRKPLRPWMFWTGAGVVILGVFAQIGHFQEHVLQAGYWIGHPNAPAWMTPWGTSLANGFGQVNHAKPTLGMEILHLVGNFHFLAGLAGVALLTHHALQS.KARRWGRMGVLMQGIHGLEHVALTLSVLLGSK-AIGLSTIFGLLDAGPGLWTFRVWWHFLANVLGTSIFAMALYYLWRERATITASY.........GVS-----------glprtttapagpv...................
A0A2A4KMJ0_9ACTN/1-249             ........mdhsgmpgm---.APTVSTVDTVGAVLFIGWAVAMWAAVAVLAVGNRKAVKPWLYKLAVGLVGVGVVGQVGHFQEHVTQAGYWIAHPYAPAWMTPWADSFARGMGQVDAGKPALGMEILHLVGNFIFLAGLVGIVQITHRVAGQlKARKWARMGVWMQGIHGIEHVVLTASVALGASRAIGLSTWFGAIEPGPALVTYRVWWHFVANAVGTVILCIALYHLWKEKRAVKESFgl.....lrD----V--------etaaapagseegsas.................
A0A0G3UZG4_9ACTN/7-257             .......mpgmpgmagm---.GGPVSTLDTVTAVLFILWAVSMWLAVGVLAYANRGPVKPWLYKTSVGLIGLGVIGQIGHFQEHVSQAVYWIAHPTSPAWMTPWANSLSRGMGQVDTTKPSLGMEILHLTGNFIFLAGLVGIVLITKRVAGQlQSRKWAKMGVWMQGIHGLEHVVLTASVALGAKRAIGLSTWFGTIDPGPALTTYRVWWHFVANLIGTGILALSLYHLWREKRSVKAGF.........GERTGDE-------asqtpgdgetpahge.................
H5XBZ0_9PSEU/1-243                 .................MQHsHASATTLEMLGAAGLFLWAVSMWAAVAVLVYAAHRVVRPWLYHGSACVIVVGMFGQIGHVQEHFAQVGYWAANPNERAWMTPWGTGLADGFGALVSGSPTLGMEILHLVGNFIFLAGLVGVVLITREAVHS.KARKWGRMGAVMQGIHGLEHLALTVSVAAGSP-AIGISTLFGLLEPGPGLWTYRIWWHLIANVVGTVIFVVACHHLWKERRGVAASFspr...vpqP-------------rapertaesaavtva.................
A0A221NTG9_9ACTN/1-245             ................m---.GNVVSSWDTLGAVFLIAWAAAMWLAVIVLALANRGPARPWLFKTAVAVIGLGVIGQIGHFQEHVAQTGYWVAHPYSPAWMTPWGNGLARGMGQVDPSKPTLGMEILHLTGNFIFLAGLVGVMQITRRAVGGlKSRKWAKMGVWMQGMHGLEHLVLTLSVALGASRAIGLSTWFGLIEPGPALVTYRVWWHFIANLVGSVIFAVSLYHLWKERHAVKAGY.........QASGVE--------esvfvpssvstslpaseee.............
A0A7G1KSF8_9NOCA/1-237             .................MQH.TAEVSGWAVAGAIGMVVWMVVMWAGVAVLFLCLRKPLRPWMFQTGLAVVGLGVLAQLGHFQEHVAQVAYWVGHSNEPGWMTPWGTALANGFGQVDHMKPALGMEILHLVGNFHFLAGLAGVALITRHAVAS.RARRWGRMGVLMQGIHGLEHIALTVSVLFGAK-AIGLSTWFGLLDAGPGLWTYRVWWHFFANVIGTTIFAMALYHLWRERAAIAAPY.........YAATTGKAA-----ttttadea........................
A0A2T0LNA6_9PSEU/1-235             ...............ms---.-GSVTVLEVAGAAGLTVYAVAMWVAVGVLAYALRGPLPPWLPRVAAGVITAGVVGQLGHVQEHVAQAAYWVLHPEEPAWMTPWGDGLARGFHALAGGQHALGMELLHLTGNVVFLAGLVGVALVARHAAAF.RARRWARMGVWMQGLHGLEHLVLTVSVALGGP-AVGLSTWFGTIEPGPALWTYRIWWHFLANVAGSIVLTVALCLLWAERDRVAGSW.........SGARRVTPQR----apvhsna.........................
A0A1Q5NAD1_9ACTN/1-251             ........mdhsgmpgm---.APTVSTVDTVGAVLFIGWAVAMWAAVAVLAVGNRRAVKPWLYRLGVGLVGVGVVGQVGHFQEHVTQAGYWIAHPYSPAWMTPWADSFARGMGQVDAGKPALGMEILHLVGNFIFLAGLVGIVQITHRVAGQlKARKWARMGVWMQGIHGIEHIVLTASVALGASRAIGLSTWFGAIEPGPALVTYRVWWHFVANAVGTVILGIAVYHLWKEKRAVKESFgll...gdvE-------------taaapagseegsasal................
A0A1Q5JR88_9ACTN/1-274             .mdhahgghgmsgmggm---.GSTVSSMDTVGAVLFIGWAVAMWAAVVVLALGNRGQVRPWLYRTAVGLIGLGVIGQIGHFQEHVAQVGYWVAHPYSPAWMTPWANGLSRGMGQVDSSKPMLGMEILHLTGNFIFLAGLVGIAQITRRAAGElKSRKWAKMGVWMQTIHGIEHVALTLSVALGASRAIGLSTWFGLIEPGPALVTYRVWWHFVANLIGTAILAIAVYHLWKERRAVKAGYgap...vaeP-------------seagvtvavvdsadadqadagseespaaeptl
C7Q9W6_CATAD/1-235                 .................MSG.GHSVPMLDTLGAVGLLVWAVVMWAAVAGLAFADRQGKSMRVYKVSMAVILIGVVGQIGHLTEHVAQAVYWIWHPEAPAWMTPWGTGMARGFGQIDKSRPTLGMEILHLVGNFIFLSGLAAVMVISRRARNT.RTRWWGKMGVWMQGIHGLEHLSLTVSVWLGAKQAVGLSTWFGQLTPGPGATTYRVWWHFWANVMGSAIFAMALYHLRREQGQIRDSF.........DESPVTPPVPV---dal.............................
A0A238Y3T6_9PSEU/1-232             .............mgip---.---TPLWSIAA-ALLVLWAAAMWTAVAVLARANRNPVRPWLYRASAGVIVLGVLGQLGHVQEHIAQVAYWTAHPNSPAWMTPWGDGLAAALGRVNPAEPSLGMEILHLTGNVVFLAGLAGIMLITRHALRS.RSRTWARMGVWMQGIHGVEHLALTLSVALGAGRAIGLSTWFGLLDPGPGLWTYRIWWHFIANIVGTVIFGIALYHLWRERREVEAAY.........RTPAGPASAV----pgrr............................
C7Q389_CATAD/7-243                 ...............mnMSG.GHSVPMLDTLGAVGLLVWAVVMWAAVAGLAFADRQGKSMRVYKVSMAVILIGVVGQIGHLTEHVAQAVYWIWHPEAPAWMTPWGTGLARGFGQIDKSRPTLGMEILHLVGNFIFLSGLAAVMVISRRARNT.RTRWWGKMGVWMQGIHGLEHLSLTVSVWLGAKQAVGLSTWFGQLTPGPGATTYRVWWHFWANVMGSAIFAMALYHLRRERGQICDTF.........RDAPVTPPVPV---dvl.............................
D6AAF8_STRV1/1-263                 ........mdhapgahe--M.GSSVSSLDTLGAVLFIGWTVGMWLAVVVLAYANRGPVRPWLYKTAVAVIGLGVIGQIGHFQEHAFQAGYWVAHPYSPAWMTPWANSLARGMGQVDPDNPTLGMEILHLTGNFIFLAGLVGIVQITRRAVGSlTSRKWARMGVWMQGIHGLEHVVLTVSVALGAGRAIGLSTWFGAIEPGPALVTYRVWWHFVANLIGTVILAIALYHLWKERRMVKAGY.........EVPT----------lleseagapgaapataasgeaavreptpag..
A0A2V4BA79_9PSEU/1-240             ...............me---.-HTASVWDIAGAVAMTALAVAMWAAVAVLAYATRSRVRPWCLRASVGVVAAGVLGQIGHLQEHVAQAGYWVLNPERPPWMTPWGDALARGFGIVDPATHSLGMEILHLVGNSVFLAGLAGIVLVTRYAAGS.RARRWARMGVWMQGLHGLEHLVLTVSVAIGQQ-AVGLSTWFGTLPAGPALWTYRVWWHFVANVVGSVIFAIALHHAWRERRLVTASW.........SAAT----------pgprvepdpadratssvh..............
A0A101SQ49_9ACTN/1-258             mdhahgahgmgsmsgmg---.GSGVSSWDTLGALLLTGWAVAMWAAVVVLAFGNRRQVRPWMYKTAVAVIGLGVIGQVGHFQEHVAQVGYWVAHPYSPAWMTPWGTGLARGMGQVDPTKPTLGMEILHLVGNFIFLAGLVGIAQITQRAARNlKSRKWARMGVWMQTIHGLEHVVLTLSVALGATRAIGLSTWFGLIEPGPALVTYRVWWHFVANLIGTAILAIAVYHLWKERRAVKAAY.........EAAVPAASETA---eavapatseld.....................
A0A6B2DPW5_9PSEU/1-233             ............mdmpm---.-TSTPGWDVVGATLLVLWALAMWGAVGVLAYANRGPVRPWVYRGSAAVIGIGVLGQLGHVQEHIAQAGYWLGHPNSPAWMTPWGTTLANGLQRVLPDRPTFGMELLHLTGNFIFLAGLAGVMVITRRALKT.RARRWAKMGVWMQGLHGLEHLVLTVSVASGSR-AIGLSTFFGLVDAGPGLTTYRVWWHFVANVVGSIIFGLALYHLWKERREVRATF.........SVRP----------lpdvirqa........................
A0A7X6LAX7_9NOCA/1-235             .................MNH.TAEATGLEILGAILMVAWMVVMWAAVGVLAVAVRKPLRPWMFRTALGVIALGVVAQIGHFQEHVAQVGYWIQHPNSPAWMTPWGTGLANGFGRVDHMKPALGMELLHLVGNFHFLAGLVGIALVTHHALES.KARKWGRMGVLMQGIHGLEHLALTLTVAFGTK-AIGLSTIFGLLDPGPGAATYRIWWHFLANVIGTTIFAVALYHLWRERAVIEAPF.........RTPAAAKPKRA---paaa............................
A0A3N6HT35_9ACTN/2-150             ..............pgm---.APTVSTVDTAGAVLFIGWAVATWAAVAVLAVGNGRAVKPWLYKLAVGLVGVGVVGQVGHFQEHVTQAGYWIARPYALAWMTPWADSSARGMGQVDAGKPALGMEILHLVGNCIFVAGLVGIVQITHRVAGQlKARKFA---------------------------------------------------------------------------------.........--------------grfgparv........................
A0A1I1B783_9PSEU/1-234             ...............mm---.GAPPSVLDTLGALALAGWTVAMWAAVAVLAYANRGPVRPWVYRAAAAQIFLGILGQLGHVQEHVAQVGYWVGNPNAPAWMTPWGTGLADGFGQLDRSKPSLGMEILHFTGNLLFLTGIVGVMLITHRAVRS.KARKWARMGVWTQGFHGLEHLVLMLTVWLGAPRAIGLSTWFGLLDPGPGLWTYRIWWHFVANVVGSVIFAIAVYHLWRERDRIAATH.........RPAA----------agsepgvepa......................
A0A2S1Z8C4_9ACTN/1-246             .......mehpsgmhgm---.GSAVSFVDTAGAVLFIAWAAAMWLAVAVLAYANRGPVRPWLYKTAAGVIGLGVVGQIGHFQEHLAQAAYWIANPYAPAWMTPWAHSLARGMGQVDMTKPSLGMEILHLTGNFVFLAGLVGIVQITRRVTGDlKSRKWARMGVWMQGIHGLEHVVLTLSIALGASRAIGLSTWFGLIEPGAALVTYRVWWHFVANMIGSAILAIALYHLWKEKRTVKAAY.........DEAGAQEPVSAA--harte...........................
A0A7W9PKV8_9NOCA/1-234             .................MKH.AAEAGGWEIAGAIAMVVWMVVMWAGVAVLAVGLRKPLRPWVFRTGLAVIGLGVLAQLGHFQEHVLQVGYWVGHPNSPSWMTPWGTGLANGFGQVDHTKPSLGMEILHLVGNFHFLAGLAGVALVTHHAVQS.RARHWGRMGVVMQGIHGLEHIALTVSVALGAK-AIGLSTFFGQLDPGPGLWTYRVWWHFVANVIGTTIFAIALWQLWRERATIAAPY.........RDRARTVAAKA---epa.............................
G0FXR3_AMYMS/1-231                 ...............ma---.-MPMSGWDTAGAVLLVLWALAMWTAVGILAYANRGPVRRWVYRGALAVIGFGVLGQLGHVQEHVAQAGYWLGHPNAPAWMTPWGTGLASGLQQVLPGRPTFGMELLHLTGNFLFLAGLAGVMVITRRATNT.RTRRWAKMGVWMQGLHGLEHLVLTLSVAFGAPRAIGLSTFFGLVDPGPGLTTYRVWWHFAANIAGSIIFGLALYHLWRERREVRATF.........VL------------rplpavtgra......................
#=GC seq_cons                      ...............h.....ssssSshDshGAlhhlsWAVuMWAAVAVLAhANRpsVRPWlY+susuVIulGVlGQlGHhQEHVAQsGYWluHP.uPAWMTPWGsuLAcGhGQVDsuKPoLGMEILHLsGNFlFLAGLVGls.IT+RAsss.+uRKWARMGVWMQGIHGLEHlsLTlSVALGAspAIGLSTWFGhl-PGPuLhTYRVWWHFlANllGosIhulALYHLW+ER+tVcAua.........ps.s..........ssstss.t........................
//
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