GenomeNet

Database: Pfam
Entry: DUF6021
LinkDB: DUF6021
Original site: DUF6021 
#=GF ID   DUF6021
#=GF AC   PF19485.3
#=GF DE   Family of unknown function (DUF6021)
#=GF AU   Williams LS;0000-0001-5551-8526
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   29.00 29.00;
#=GF TC   29.30 30.60;
#=GF NC   28.60 28.60;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   17254952
#=GF RT   The genomisotopic approach: a systematic method to isolate
#=GF RT   products of orphan biosynthetic gene clusters.
#=GF RA   Gross H, Stockwell VO, Henkels MD, Nowak-Thompson B, Loper JE,
#=GF RA   Gerwick WH;
#=GF RL   Chem Biol. 2007;14:53-63.
#=GF DR   INTERPRO; IPR046063;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0000399) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, NRP (non-ribosomal
#=GF CC   peptide). This  family includes a protein from the orfamide A
#=GF CC   biosynthetic gene  cluster from Pseudomonas protegens Pf-5 and
#=GF CC   appears to be  predominantly found in Pseudomonadaceae [1].
#=GF SQ   10
#=GS L1LYQ2_9PSED/5-55       AC L1LYQ2.1
#=GS Q4KER9_PSEF5/19-85      AC Q4KER9.1
#=GS A0A077LK42_9PSED/4-51   AC A0A077LK42.1
#=GS G8PYS4_PSEO1/3-64       AC G8PYS4.1
#=GS A0A6M8MVK2_9PSED/3-60   AC A0A6M8MVK2.1
#=GS A0A7X6EA68_9PSED/4-68   AC A0A7X6EA68.1
#=GS A0A2A2KC42_9BILA/38-87  AC A0A2A2KC42.1
#=GS A0A0M9GC82_9PSED/37-86  AC A0A0M9GC82.1
#=GS Q88HW3_PSEPK/4-54       AC Q88HW3.1
#=GS A0A8I0CWE5_9PSED/1-66   AC A0A8I0CWE5.1
L1LYQ2_9PSED/5-55                  ......kpqdk-----QGPHSSEHAS.GsDELGFDPDSPDLDDPQVDPTGPAKAP--..--....-....--..-------------kggpgksg......
Q4KER9_PSEF5/19-85                 ..........t-AKNPTGPRSSEHAS.NhHDPGFDPDSPDLADPQVDPVGPARAPLD..RP....Ep..eHRrnRSRAYDPLANLK-k.............
A0A077LK42_9PSED/4-51              hkndplptgkp---------------.-.---DFDPDSPDLEDPQIDPPEPAKSPDD..KP....P....AG..DYPP---------yne...........
G8PYS4_PSEO1/3-64                  ...........QSKTPTGPHSSEHSS.G.DDLGFDPDSPDLEDPQVDPVGPAKAPLD..KK....E....ER..KPKPYDPLGDLKV..............
A0A6M8MVK2_9PSED/3-60              ...ndtsltgt---------SAQTDP.D.KDLGFNEESPDVSDPQVDPTEPARTEND..P-....-....--..-------------vteepttrrgndep
A0A7X6EA68_9PSED/4-68              .........pn---SPSGPHSSEHGS.G.DDLGFDPDSPDLDDPQVDPIGPAKAPKD..VQpgddP....KR..PAKPYDPLADLK-p.............
A0A2A2KC42_9BILA/38-87             ........hsp---AKQGPHSSEQATeP.DDLGFDPDSPDVDDPQVDPQGPAKPPRD..VE....K....E-..-------------g.............
A0A0M9GC82_9PSED/37-86             .....qktard-----QGPHSSEQASvK.NDLGFDPDSPDLEDPQVDPQGPAKPPRD..ER....-....--..-------------qh............
Q88HW3_PSEPK/4-54                  .....sqpphk-----EGPHSAEQADkK.ADLGFDPDSPDAEDPQVDPQGPAKPPRDieKK....-....--..-------------e.............
A0A8I0CWE5_9PSED/1-66              ..........m-SNPPKGPSSDEHAS.GkDELGFDPDSPDVADPQVDPIGPAIAPLD..KD....KkdpaEK..KP-PYDPLGDLK-p.............
#=GC seq_cons                      .........ts.....pGPHSSEpAS.s.cDLGFDPDSPDL-DPQVDPhGPAKuPpD..cp.........t..............................
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