GenomeNet

Database: Pfam
Entry: DUF6180
LinkDB: DUF6180
Original site: DUF6180 
#=GF ID   DUF6180
#=GF AC   PF19678.3
#=GF DE   Family of unknown function (DUF6180)
#=GF AU   Williams LS;0000-0001-5551-8526
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   26.90 26.90;
#=GF TC   27.00 49.40;
#=GF NC   26.80 20.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   21609846
#=GF RT   Identification and characterization of the lysobactin
#=GF RT   biosynthetic gene cluster reveals mechanistic insights into an
#=GF RT   unusual termination module architecture.
#=GF RA   Hou J, Robbel L, Marahiel MA;
#=GF RL   Chem Biol. 2011;18:655-664.
#=GF DR   INTERPRO; IPR045752;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0000385) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, NRP (non-ribosomal
#=GF CC   peptide). It  includes a member from the lysobactin biosynthetic
#=GF CC   gene cluster from Lysobacter sp. ATCC 53042 [1].
#=GF SQ   20
#=GS A0A494THL0_SPHPE/44-146  AC A0A494THL0.1
#=GS A0A844H5T6_9RHOB/26-126  AC A0A844H5T6.1
#=GS A0A520FU05_SPHSX/24-103  AC A0A520FU05.1
#=GS A0A6I4TXT4_9SPHN/29-132  AC A0A6I4TXT4.1
#=GS A0A4Y8MZB2_9RHOB/26-116  AC A0A4Y8MZB2.1
#=GS A0A5B0DX88_9HYPH/26-126  AC A0A5B0DX88.1
#=GS A0A840SMA2_9RHOB/26-126  AC A0A840SMA2.1
#=GS A0A0Q5VSM5_9HYPH/26-126  AC A0A0Q5VSM5.1
#=GS A0A0S2DH80_LYSEN/23-129  AC A0A0S2DH80.1
#=GS A0A1I3FBI9_9RHOB/26-126  AC A0A1I3FBI9.1
#=GS U1XUW0_9BURK/25-128      AC U1XUW0.1
#=GS A0A0Q6DLD8_9HYPH/33-133  AC A0A0Q6DLD8.1
#=GS A0A256FSL4_9HYPH/1-53    AC A0A256FSL4.1
#=GS A0A0R0CPP7_9GAMM/25-127  AC A0A0R0CPP7.1
#=GS A0A4R7BWB6_9HYPH/23-124  AC A0A4R7BWB6.1
#=GS A0A0A1PMQ4_9BACT/26-127  AC A0A0A1PMQ4.1
#=GS A1B805_PARDP/26-126      AC A1B805.1
#=GS A0A1I3FAV6_9RHOB/4-58    AC A0A1I3FAV6.1
#=GS A0A4R2GQX3_9HYPH/27-127  AC A0A4R2GQX3.1
#=GS A0A2U8VY19_9HYPH/26-126  AC A0A2U8VY19.1
A0A494THL0_SPHPE/44-146             ......r-FGLEYRVERKDAGTLSLATCLATARKASADLGYVAMTAkSYPGQLTVFASGPANGGGSLTVYCIAVDKKTAFVVQALDYNR.AQSA.AA.KrTAG......YVHQALLRA--r...
A0A844H5T6_9RHOB/26-126             .......DFSLTYHVERTPAARLSIETCGKTVADAAASAGLQGVTQ.SYPGQLVTVSGGAA-PRGAFVVQCIAVGDTTVSVVQGIDYRA.QKGA.LG.E.FAD......QVFAAIKSAV-e...
A0A520FU05_SPHSX/24-103             .......DFTLTYHVERTPAARLTITSCGNAVAQVARRSGLSVGVE.SFPGKLVIVRGGKA-GSGAFVVQCITVDNTTVSVVQGIDYR-.----.--.-.---......-----------s...
A0A6I4TXT4_9SPHN/29-132             ......q-FGLSYHVDRLDTTKLSVADCLTTAQQASTALGYATTVRqLHPNQLGVLASGPRNGGASLTVYCIAVDRKTAVVVQALDHQQ.ANSA.AAqR.VAD......NVRQAVLRAGR....
A0A4Y8MZB2_9RHOB/26-116             .......DFNLIYHVERTPAAQLSIEACGQAVVDAATQAGLRSATQ.SYPDQLVTVSGGED-SLGAFVVQCIAVGDTTVSVVQGIDYRQ.QKGA.PR.K.---......-----------lsaa
A0A5B0DX88_9HYPH/26-126             .......DFHLTYHVERTPSAQLSIETCGEAVMQKARNTGLRSDIQ.SYPNQLVTVSGGRE-GSGAFIAQCIAVGDVTVSVVQGIDYES.GKGA.IG.S.FAD......DAFDAVKAAA-d...
A0A840SMA2_9RHOB/26-126             .......DFTLTYHVERTPSARLDIDACGDAAMKAAEAAGLISTVQ.RFPEQLVSVSGGRE-GEGAYVVQCIAVDDKTVSVVHGIDYRD.QKAA.MG.E.FAD......AAAEAVAAAAK....
A0A0Q5VSM5_9HYPH/26-126             ......g-FALTYHVERIPAAQFSIDTCGSVVSDAAQQAGLSVDLK.SFPDQLVTVHGGAS-GTGAYVVQCIAVGDTTVAVVQGFDYRE.TKGT.MG.D.FAD......QAIAAVKEAAK....
A0A0S2DH80_LYSEN/23-129             .......DFSLGYEVDRVPAAQLSVQACNAAIGRGAAALGYVVRAN.QDQKTLSLHVSGPRQEGRSLVAYCIAAGNHTAWVVQAFDYSGpGLSE.PG.V.IAKkv..agEIRKAIKPAAR....
A0A1I3FBI9_9RHOB/26-126             .......DFNVTYHVERTPAAQLSIETCSKAVVEVATQAGLRSATQ.SYPDQLVTISGGAD-GNGAFIVQCIAVGDTTVSVVQGIDYRQ.QKGT.LG.A.FAD......QAFAAVKAAAQ....
U1XUW0_9BURK/25-128                 .......WMPLELEAEQRSISRLSVAQCLDTVQQTAAGEGYQQRNDpAASEQLGVYIGAAPLGGGSLVVYCIDLNPSTAYIIRT-----.KAQV.TA.D.LMSphqlnhKITQALTVANQ....
A0A0Q6DLD8_9HYPH/33-133             .......DFNLTYHVERTPAAKLSIETCGAEVQKAAGEAGLTADVR.SFPGELVTVSGGAE-GSGVFVVQCIAVDDTTVSVVQGIDYRN.EKGL.LG.S.FAD......GAIAAVKAAAQ....
A0A256FSL4_9HYPH/1-53               ......m-----------------------------------VSLQ.QFPQQPIIVSGGEQ-GRGVFTVQCIAVEDVNVSVVQGFDYKE.NKGE.--.-.---......-----------ncc.
A0A0R0CPP7_9GAMM/25-127             .......DFSLGYDVDRFPAAKLSMQACRAAVTRGAAAVGYSTRVD.QDQKTLVLHVSAPREDGRSLISYCISAGDQTVFVIQAFDYSG.PNNPdVD.R.VKA......RVGAEVR----kvar
A0A4R7BWB6_9HYPH/23-124             .......DFKLEYRVERTEAAALSLDQCADIVRKEAAEAGYTQSVD.RHPGQLVTVTGGPSGGGSSFIVHCIAVDGKTVSVVQAIDYRG.RGAT.AK.R.FAD......RVHAALTKAGR....
A0A0A1PMQ4_9BACT/26-127             .......EFSLEYRVERRSAADLNLDTCADVARREAEAVGYSQKVQ.RFPNQLAVVSGGPRGGGGSFVVYCIAVDDKTVQLVQVIDYQN.RAQP.AA.E.FAD......RVHKALLAAGR....
A1B805_PARDP/26-126                 .......DFSLTYHIERTPAAQLSIETCGSTVADAAAQAGLRAVSQ.SFPGQLVTVSGGAE-GRGAFVAQCIAVDDKTVSVVQGIDYQQ.AKGA.IG.D.FAD......QAFAAVQATVR....
A0A1I3FAV6_9RHOB/4-58               snrivsk---------------------------------------.---------------PNGAFIVQCIAVGDTTVSVVQGIDYHQ.QKGT.LG.A.FAD......QAFAAVKAAAQ....
A0A4R2GQX3_9HYPH/27-127             .......DFALEYRVERAEASRLSLDQCARVVEQAASQAGYRVSID.RYPGQLAVIAGGPQQGGWSYTVYCIAVDQKVAHVTQGVSYR-.PGGG.AA.G.FVD......QVHAALLKAAR....
A0A2U8VY19_9HYPH/26-126             .......DFKLEYRIERIDAGRLSVGRCTETLRRTAQENSIPVAVS.DPRDEAVVISGGPRDGKGAIIAYCIAAGDKTVYVVQGIGYR-.AGTA.AT.A.FAD......KAHADLLKASQ....
#=GC seq_cons                       .......DFsLpY+VERpsAApLSlpsCussVtcsAspsGhpsslp.paPsQLVsluGGsp.GsGualVpCIAVsDpTVuVVQGIDY+p.tpus.hu.p.FAD......pshtAlttAup....
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