GenomeNet

Database: Pfam
Entry: DUF6408
LinkDB: DUF6408
Original site: DUF6408 
#=GF ID   DUF6408
#=GF AC   PF19946.3
#=GF DE   Family of unknown function (DUF6408)
#=GF AU   Williams LS;0000-0001-5551-8526
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   25.00 25.00;
#=GF TC   77.20 77.10;
#=GF NC   23.50 22.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   21614382
#=GF RT   Cloning and functional analysis of the naphthomycin biosynthetic
#=GF RT   gene cluster in  Streptomyces sp. CS.
#=GF RA   Wu Y, Kang Q, Shen Y, Su W, Bai L;
#=GF RL   Mol Biosyst. 2011;7:2459-2469.
#=GF DR   INTERPRO; IPR045639;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0000106) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, polyketide, in particular
#=GF CC   the naphthomycin A biosynthetic gene cluster from Streptomyces
#=GF CC   sp. CS [1].
#=GF SQ   12
#=GS A0A445NKB9_STRNE/1-42  AC A0A445NKB9.1
#=GS A0A3N6ED62_9ACTN/1-42  AC A0A3N6ED62.1
#=GS A0A7K2JYI2_9ACTN/1-42  AC A0A7K2JYI2.1
#=GS A0A1G5LUS8_9ACTN/1-42  AC A0A1G5LUS8.1
#=GS S2ZBR0_9ACTN/1-42      AC S2ZBR0.1
#=GS A0A1H0HY80_9ACTN/1-42  AC A0A1H0HY80.1
#=GS A0A1H9JPF9_9ACTN/1-42  AC A0A1H9JPF9.1
#=GS A0A1X7EGD5_9ACTN/1-42  AC A0A1X7EGD5.1
#=GS A0A1C4SHJ5_9ACTN/1-42  AC A0A1C4SHJ5.1
#=GS A0A2Z5KB35_9ACTN/1-42  AC A0A2Z5KB35.1
#=GS O86558_STRCO/1-42      AC O86558.1
#=GS D6A5X2_STRV1/1-42      AC D6A5X2.1
A0A445NKB9_STRNE/1-42             MTSVECKPARRERIRAILIEIAAAVVSNLLVTALVAVASLLV
A0A3N6ED62_9ACTN/1-42             MNPVEYTSARRIWFRKVLMDVAVGVVANLVVAAVAAAAHLLF
A0A7K2JYI2_9ACTN/1-42             MDPVEYQPARCARIRKVLANVAVNVVANLLVAAMMSAAHLLF
A0A1G5LUS8_9ACTN/1-42             MNPVEYKPARRIWLRKILIDVATGIVTNLVLAALVAAARLLF
S2ZBR0_9ACTN/1-42                 MEPVEYKPARRRWIREILVGAAAGIVSNLVLEVLAAAAHLLV
A0A1H0HY80_9ACTN/1-42             MEPVEYKPARRPWIREILAGAAASVISNLVWEALAVAARHLI
A0A1H9JPF9_9ACTN/1-42             MNPVEYKLARRDRIRQILVDVAVGVVINLLMAALTAAARLVF
A0A1X7EGD5_9ACTN/1-42             MNPVEYKLARRDRIRQILVDVTVGVVINLLVAALTAAARLVF
A0A1C4SHJ5_9ACTN/1-42             MEPIEYKPARRPWVREILVGTATNVIAALVVAAVLAAARHLI
A0A2Z5KB35_9ACTN/1-42             MEPVEYKPARRSWIREILVGAAAGVASNLVWELLTAAARLLV
O86558_STRCO/1-42                 MDPVEYQPARYARLRKILANVAVNVVANLLVAAMMSAAHLLF
D6A5X2_STRV1/1-42                 MDPVEYQPARYARLRKILADVAINVVANLLVAAMMAAAHLLF
#=GC seq_cons                     MsPVEYKPARRshlRcILsslAsuVVuNLllAAlsAAA+LLh
//
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