GenomeNet

Database: Pfam
Entry: DUF6418
LinkDB: DUF6418
Original site: DUF6418 
#=GF ID   DUF6418
#=GF AC   PF19982.3
#=GF DE   Family of unknown function (DUF6418)
#=GF AU   Williams LS;0000-0001-5551-8526
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF AU   Fragoso S;0000-0001-7018-3891
#=GF SE   Manual
#=GF GA   25.00 25.00;
#=GF TC   31.20 31.20;
#=GF NC   23.70 23.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 --cpu 4 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   28658258
#=GF RT   Genome-scale analysis of the genes that contribute to
#=GF RT   Burkholderia pseudomallei biofilm formation identifies a crucial
#=GF RT   exopolysaccharide biosynthesis gene cluster.
#=GF RA   Borlee GI, Plumley BA, Martin KH, Somprasong N, Mangalea MR,
#=GF RA   Islam MN, Burtnick MN, Brett PJ, Steinmetz I, AuCoin DP, Belisle
#=GF RA   JT, Crick DC, Schweizer HP, Borlee BR;
#=GF RL   PLoS Negl Trop Dis. 2017;11:e0005689.
#=GF DR   INTERPRO; IPR046303;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This entry represents a member of a biosynthetic gene cluster
#=GF CC   (BGC). This BGC (BGC0001589) is described by MIBiG as an example
#=GF CC   of the following biosynthetic class, saccharide, in particular
#=GF CC   the exopolysaccharides biosynthetic gene cluster from
#=GF CC   Burkholderia  cenocepacia J2315 [1]. This family appears to be
#=GF CC   predominantly found in Proteobacteria.
#=GF SQ   30
#=GS A0A147EFM0_9SPHN/304-417  AC A0A147EFM0.1
#=GS A0A448NYH3_9ACTN/364-468  AC A0A448NYH3.1
#=GS A0A099XZS3_9FLAO/292-401  AC A0A099XZS3.1
#=GS A0A844YJI4_9SPHN/319-430  AC A0A844YJI4.1
#=GS A0A5B0H6B2_9BURK/345-453  AC A0A5B0H6B2.1
#=GS L0M4C5_ENTBF/310-418      AC L0M4C5.1
#=GS A0A5J4IMW1_9FLAO/62-177   AC A0A5J4IMW1.1
#=GS A0A848FED4_9BURK/352-461  AC A0A848FED4.1
#=GS A0A4Q2ZHP9_9SPHI/345-453  AC A0A4Q2ZHP9.1
#=GS A0A520FVE9_SPHSX/267-375  AC A0A520FVE9.1
#=GS A0A0S9CBC6_9SPHN/360-468  AC A0A0S9CBC6.1
#=GS A0A160FHK0_9BURK/345-453  AC A0A160FHK0.1
#=GS A0A087BZP1_9BIFI/139-246  AC A0A087BZP1.1
#=GS A6VMJ1_ACTSZ/313-421      AC A6VMJ1.1
#=GS A0A137RKC4_9FLAO/296-407  AC A0A137RKC4.1
#=GS I9L9J2_9SPHN/327-437      AC I9L9J2.1
#=GS A0A1H1RUW4_9FLAO/292-402  AC A0A1H1RUW4.1
#=GS A0A2S2FHD5_9GAMM/319-427  AC A0A2S2FHD5.1
#=GS A0A1G8YTI9_9PSED/294-400  AC A0A1G8YTI9.1
#=GS A0A5C4SST0_9FLAO/285-394  AC A0A5C4SST0.1
#=GS A0A433HE24_9BACI/310-418  AC A0A433HE24.1
#=GS A0A158GK11_9BURK/350-458  AC A0A158GK11.1
#=GS A0A0B3BP77_9PSED/306-414  AC A0A0B3BP77.1
#=GS A0A0H3KQV7_BURM1/341-449  AC A0A0H3KQV7.1
#=GS A4JN75_BURVG/348-456      AC A4JN75.1
#=GS A3WG49_9SPHN/322-428      AC A3WG49.1
#=GS A0A3L9YZ35_9FLAO/295-406  AC A0A3L9YZ35.1
#=GS Q1GSU1_SPHAL/318-425      AC Q1GSU1.1
#=GS A0A7K3L2T2_9ACTN/142-248  AC A0A7K3L2T2.1
#=GS A0A5C7B9R1_9FLAO/280-391  AC A0A5C7B9R1.1
A0A147EFM0_9SPHN/304-417             ....alr---NGIGPAYFMNRYAPSK..FRAAQMRGGglITYTMALEPLALVMFGWFGLVL.TLIVSGFLFAAGACYLAYAIERRLMP.SMIFAGYLIVMLKSYSA.QGAPWvvvSIFTLKWLSVV............
A0A448NYH3_9ACTN/364-468             ......a-PSTQSGIYVLMDALSPS-..---GANQAG..YTLNSGYPAILIYIFGSGLATVgVCFLGGLLFGLIALVVAHSILRGSML.LAACGYGVLYSLYLAFT.MGGAL...YIS--------srlmyvs.....
A0A099XZS3_9FLAO/292-401             .....vl--ELWKGMHHLMLEFWPWRyqDFISVTTRG..VSWTNAYPSILIRIFPLPLALV.ANFFLISFVSLIQTLLSIFIKRKSLF.ISIILFQLLIWTSYAYT.MAYFS...KLL-IPFFFI-l...........
A0A844YJI4_9SPHN/319-430             ...dsnv----NTSIKYLMINEVGFF..RTEELLANG..TQFAGGYPEIYLSLFGMFWAIP.LMVLIGICTAWITRLAMRNIFRGYLL.SSIMAIYVMFAFHLGYI.GGMLN...SLLAYTFY---lkilil......
A0A5B0H6B2_9BURK/345-453             ....dsf---GYSGLRDVMVAYGDPR..LISVYIKDD..VTFTMGQMAIPVFWFGLAGGAL.FVAFTGVIFGALCALQIVFALRGGVV.MLWLVVKVLSYAGSGIQ.QGDYW...SFFSVRTLFYV............
L0M4C5_ENTBF/310-418                 ......t-EERDKGIFYLMSQITPLN..IFEGYYEKK..INFTMASPVNIIYFFGYGFSLF.IAIPIGFLCGIMLGIFRIAVINSDYW.IVLLFVKIQYTIVRIFT.MGEMY...AFSEPKFLILC............
A0A5J4IMW1_9FLAO/62-177              .....pa--DLLYGMPIMMEEFAADKkmVLTANNTGG..YNFTNAYPGILFKIFPVSLALVyHTILVIGFLALMGWVLKELMVKKAYF.LSIIAYQLFNWTIYAFV.MGYFY...KLY--------fafgflavyflf
A0A848FED4_9BURK/352-461             .tfqhrl------APFYFVERYAPTV..LFLSFVNNGgmVTPTMVFEAYSLVMVGYAGLAL.ALLLAGVWTGWLAHHLARAMAGGNPA.DVLLPSFAMFQTIVLMS.QGTLH...SLLSLSA----fka.........
A0A4Q2ZHP9_9SPHI/345-453             ..rsapy-----IGARDFMSQYLETP..RYNSYVERG..VTLTMATEGYLLKVFGWFAGIP.FYWVLLAVYALQVLYFAYALNTYNPL.RIIIACKLLVWSNYGLN.QGYLW...EVIGLPVLA--lm..........
A0A520FVE9_SPHSX/267-375             asakgie-------TFYFIHHYAPAW..LANAIRKNQgwVQFTMGTEAMALVMFGYIGVAT.VMVLAGGLVALLSLYLRRTFASGFPV.SLYFAVWAYLQVYLTVQ.QARFW...SIA--------apgqlk......
A0A0S9CBC6_9SPHN/360-468             ......t-AGTRFGLYYVMQPFTASR..LLGWAMEGG..TGFVFSLYPYLLMTMGIVGLLI.VSSIIAAFHAFVMNMLAQTIAQGNWI.ASILLGRMMSSLYGGYT.TGFLW...NFFGIKNLVT-l...........
A0A160FHK0_9BURK/345-453             ....dsf---GYSGLRDVMVAYGEPH..VITGYIKDD..ITFTMGQMAIPVFWFGLAGGAL.FVALTGVIYGALCALQIVFALRGGVI.MLWLVVKVLSYASSGLQ.QGDYW...SFFGVRTLFYV............
A0A087BZP1_9BIFI/139-246             .....np----DSGVYGLMQKYSQSD..IVENYISHK..VRFSANFFAVSLFYNGIIITVI.AIAINAIILVTFLKLFSDDAIHQRSL.AFVILFRIFQIFSTYVTgSGTLT...EFYRINVLLLI............
A6VMJ1_ACTSZ/313-421                 ......l-NQYDVGMYKVMQLNTTPE..RFEWKLDKL..SRYVYSTPALLYYYLGKYTGAF.AMLFLGFLLGGWVKLVGYTISSGDLF.MSLIAARFFYIIRKGVK.DGDIY...KFFSLEFIFLI............
A0A137RKC4_9FLAO/296-407             .....pa--DLLYGMRVMMDDFAKDRkmVISANEEGG..YNFTNAYPGILFKIFPLSIGLVfHTFLTIVFLALLGWMLKELMVKGAMV.LSIIAYQLFNWTIYAFV.MGYFY...KLY-FTIFF--lfl.........
I9L9J2_9SPHN/327-437                 ......a-FDTRTGIFHMVVLFAPDN..IRNSIFNASgyVQFTGASEAYLALLLGQIPMAF.LIMALAVTCGLLVYYVYNALWAGSMP.SYFIALFILSNFASMLN.QASFW...QIFGARALMYI............
A0A1H1RUW4_9FLAO/292-402             .....vl--ELWKGMHHLMLEFWPWRyqDFISVTTRG..VSWTNAYPSILIRIFPLPLALF.ANFILMSFVALMQTLLTVFIKRKSLF.VSLILFQLLIWTSYAYT.MAYFS...KLT-IPVFFI-la..........
A0A2S2FHD5_9GAMM/319-427             ......e-SDRESGTYYLMDQVSSKS..LVDARFETQ..SKFTMSGFFNHVYYFGYWLGAL.LNFLWGAFFGFLCYLLYLGIKCKNII.YSFISFKFLYKVQALFL.VGSIT...DFFTIGTLVF-s...........
A0A1G8YTI9_9PSED/294-400             .....pa--GLWDGMENVMLLISPD-..IADGMIERG..VRFTFGYFASLVVHLGVF-AFP.AALIFGVLHSAIAIRVVKAVLERDLI.GYFLLANMLVMYNGFIS.MGSLS...GLLNLKLLFLL............
A0A5C4SST0_9FLAO/285-394             ......s--ELWKGMHLIMLEFWPWRneDFISVTSRG..VSWTNAYPSILLRIFPLPLALI.VNMFLLSFVAIIQELLRKFIESKSII.SSIVFFQLLVWTSYAYT.MAYFN...KLVIPVVLLF-i...........
A0A433HE24_9BACI/310-418             .....dg--KYTSGLNALMLLVSPS-..MGLGFIENG..VSFTMGFPAILNIMFNPIALFF.VLIICGIFFGLFIYVFYRSIQSFNLIyMGFLGYIYIYGIIQLFT.MGRMS...YLFNLKMYLII............
A0A158GK11_9BURK/350-458             .....nd--GAVSGLRDVMLAYGTPD..VLRAYVRDD..VTFTMGQMAVPVYWFGFAGAAL.FIALTGVVYGALAAAQIVVTQRGGVV.MLWLVTKIVSYVGFGLQ.QGEYW...NLFGLRTLGYV............
A0A0B3BP77_9PSED/306-414             ......d-DSDSVGMRYMMKKLAPEY..LYSSYLESG..VEYTGGYPAILVLIFGLFGGVL.FSVVLWGFYGFFLFYLARLIFIGSRV.RLFFSSYLYITSFAWFQ.HGSIS...SFINWKFLVVC............
A0A0H3KQV7_BURM1/341-449             .....sd--AEPSGLRDLMMSYTEPK..LLKAYIFDD..VTFTMGNMAIPVYWFGYVGGAL.FVAMTGLVYGALGALQIQVAMRGGVV.MLWLMSKVFSYATFAVQ.QGEYW...MMFGSRTLFY-a...........
A4JN75_BURVG/348-456                 ......d-ESEPSGLRDLMMSYTEPS..VLRAYMFDD..VTFTMGNMAVPVYWFGYAGGAL.FVAMTGLVYGALGALQILVAMRGGVV.MLWLIAKVFSYATFAVQ.QGEYW...MMFGSRTAFY-a...........
A3WG49_9SPHN/322-428                 .......DPSRNSTIQYLMTLELGYF..RTAELTQLG..QAYNGGYPEVHFELLGAWLPFV.TLPLAGIITAWFLSLFLKLLYRNLIL.TSVLGLYVYFGITLHYT.GGMLT...FL---------laptywv.....
A0A3L9YZ35_9FLAO/295-406             .....pt--DLLYGMPVMMKEYAKDKkmVLNANAEGG..YNFTNAYPGILFQIFPLSMALVfHTFLTICFLALMGWMLKEFMTQGAWF.LSVIAYQLFNWVLYAFV.MGYFY...KLY-FTIFFFVv...........
Q1GSU1_SPHAL/318-425                 ......r-PEGNTTIYYLMERELGFF..RAEELIEAG..QQYAGGYPEIFFLLFGVLPAIP.LMILFGTATVFVLYCAVRSFARGRPL.TCIMALYVFYGFSLCYI.GG-ML...NFIIAPTF---lvk.........
A0A7K3L2T2_9ACTN/142-248             ....nkg---STHGIYGMMYLNAPTD..LVDGKLAQG..SRYTEGGYAAMYYSGGLTGVLL.FSLAMSGIFFFVIRGLGVALKRGRAI.EVVMLARLFIVLQTALS.MGTFA...DLID-------pvslg.......
A0A5C7B9R1_9FLAO/280-391             .....pl--DLSYGMQHLMREFAAKK.sNLDKAISNG..FNFTNGYPSILFYTYPIFLALIlHILVTAILIAFPGWLLIQFIKARAYV.MAVILFQFFNWAIYAIT.MGYFY...KFN--------fiigfllly...
#=GC seq_cons                        ......t..th.pGhhhlMhpaussp..lhpuhhpsG..lsFThuh.ulhlhhFGhhhuhl.hhhlhushhuhlshhlhpslhpushl.hsllshplhhhhthuhs.hGthh...plhthphhhh.............
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