GenomeNet

Database: Pfam
Entry: DUF6564
LinkDB: DUF6564
Original site: DUF6564 
#=GF ID   DUF6564
#=GF AC   PF20202.2
#=GF DE   Domain of unknown function (DUF6564)
#=GF AU   Paysan-Lafosse T;0000-0001-5663-0894
#=GF AU   Chuguransky S;0000-0002-0520-0736
#=GF SE   MGnify-UniProt clustering
#=GF GA   25.00 25.00;
#=GF TC   25.10 25.00;
#=GF NC   24.90 24.70;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF CL   CL0110
#=GF DR   INTERPRO; IPR046694;
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is functionally uncharacterised and is found in
#=GF CC   proteins from bacteria and archaea. This domain is found in
#=GF CC   Protein LicC (swiss:P14183), a CTP:phosphocholine
#=GF CC   cytidylyltransferase involved in LPS biosynthesis. Members
#=GF CC   containing this domain are annotated as nucleotidyltransferases.
#=GF CC   It is probable that this domain has a Rossmann like fold.
#=GF SQ   16
#=GS A0A1H7ZEP2_9BACT/21-248  AC A0A1H7ZEP2.1
#=GS A0A1I7JPL0_9FIRM/23-248  AC A0A1I7JPL0.1
#=GS A0A315YBS1_9EURY/23-254  AC A0A315YBS1.1
#=GS A0A1K1M4P3_9BACT/21-248  AC A0A1K1M4P3.1
#=GS C9RPD0_FIBSS/21-246      AC C9RPD0.1
#=GS A0A3A8WWJ3_9BACT/21-249  AC A0A3A8WWJ3.1
#=GS A0A1H3DYM5_9FIRM/21-253  AC A0A1H3DYM5.1
#=GS A0A1I2UK25_9FIRM/22-225  AC A0A1I2UK25.1
#=GS A0A074M849_9BACL/20-156  AC A0A074M849.1
#=GS A0A3A9BS61_9BACT/46-275  AC A0A3A9BS61.1
#=GS A0A3A9GMU1_9FIRM/21-248  AC A0A3A9GMU1.1
#=GS A0A1T4K4H3_9FIRM/23-252  AC A0A1T4K4H3.1
#=GS A0A1W2BU00_9FIRM/23-250  AC A0A1W2BU00.1
#=GS L1MYD3_9BACT/21-247      AC L1MYD3.1
#=GS A0A1M5GLK2_9BACT/21-246  AC A0A1M5GLK2.1
#=GS A0A873WES6_9CAUD/18-257  AC A0A873WES6.1
A0A1H7ZEP2_9BACT/21-248             .......................e-DVLKCLYYEGTPANSLLNIQV...H..K...C..FD..lVD..EIIVVGGYKYDDLETFI.RQEMKDVN...H..KTKLVYNDHYHDYGSGYSLLKGIEVV--..-SDKADEIIFIEGD.L.F.FDTESVKR....IIT.S...S.K.D..VI..S....V..N..N.......E.PI..LSS..KAVA..LYFDSNN..YPHYIYDTSHSCL..IIPEP.FVAIYNSGQM....WKF..KN..PQR...VYEICQFLTPKEKQ.STNLV.IIQK.YFGVL.....KLLQ..IDIVKVV...SWYNCNTVSDYRGAMN--lt..................................................................................................................
A0A1I7JPL0_9FIRM/23-248             .......................d-KKLKAIFYEKDSKSTLLYHQL...L..K...C..SY...AD..KIILVSGYKADSLGEYV.KTLEDELK...D..KITIVFNDHFSDLASGYSLYLGLEEAFK..YEPS--EILFVEGD.L.D.IDDSSFAQ....VIA.S...S.K.S..VL..T....Y..T..Y.......E.PI..YAN..KAVV..LYKDGDD..KYRYAFNSSHGML..TIDSP.FSCILNSGQT....WKF..TE..IDK...LIPANKKFFDEAKG.DTNLK.IIQN.YLD--.....FGVD..IELIPLK...RWTNCNTRDDYRKIVSYW....................................................................................................................
A0A315YBS1_9EURY/23-254             ........................EKILKCLYFEEDSKDTLIYQML...K..K...S..SY...AD..EIVIVGGYKYSDLESYIeEVLPQDLK...D..KVTLVYNEHYSDLSSGYSLYLGIDCALA..RFDNIDEILFVEGD.L.D.IDEESFSQ....VVN.S...P.K.N..VL..T....F..N..H.......E.PI..YSN..KAVV..LYQNEND..RYCYLFNSDHGLL..SMNEP.FKAIFNSGQT....WKF..QD..MEL...LKAANDNFKENLIE.DTNLG.IIQK.YFDLV.....ENTD.dIEIIGLD...RWVNCNTRNDYQIIKEYW....................................................................................................................
A0A1K1M4P3_9BACT/21-248             ........................EEVLKCLYYEDTPSNSLISLQV...H..K...A..FD..lVD..EIIVVGGYKYEDLEMFI.RNEMKDVN...H..KMKLVYNDHYHDYGSGYSLLKGIEYV--..-SHDTDEIIFIEGD.L.F.FDIESVEK....IIK.S...K.K.D..VI..S....V..N..N.......E.PI..LSN..KAVA..LYFDADN..YPHYIYDTSHSCL..EISEP.FTAIYNSGQM....WKF..MN..PSR...VREICQFLTPDQEQ.GTNLE.IIQK.YFGAY.....RNSQ..LDIVRIN...LWFNCNTVADYREAIK--al..................................................................................................................
C9RPD0_FIBSS/21-246                 ........................KETLKCLYYKDSPKFALLPQLL...K..N...C..GE...YD..KYIIVGGYLYSALEEYV.KQNLQVYG...D..KIELVYNEHFKDYGSGYSLYKGIEAV--..--KEPGDVTFVEGD.L.F.FLKENFKK....VYD.S...E.K.S..VL..T....I..N..R.......E.PI..YSN..KAVA..LYVSTDG..RPHYLYDTNHSSL..TIPEP.FLAVFNSAQM....WKF..RS..AEK...LHEAVASLTEKQLQ.GTNLE.IIQA.YFNKL.....SREE..YDVVTFD...AWYNCNTVADYNIVREL-m...................................................................................................................
A0A3A8WWJ3_9BACT/21-249             .......................n-PVLKCIYYDKDPRKTLLYSIL...R..K...C..VG...CK..GVIIVGGYQFPELEKYV.ACWGKDFP...F..DIQVVFNPYFDSYGSGYSLKIGLQECLK..K-EMCTDILLIEGD.L.L.FDQKALEQ....MIN.G...K.K.N..YL..T....I..N..S.......E.SI..FSE..KAVA..VYVNGND..EIRYIYNTEHGLF..HIKEP.FSVIYNSGQV....WKF..SE..RGL...VEQVIRNMEDSEWQ.STNLK.FVEL.YFNKA.....ERSS..VEIVKFQ...KWVNCNTRLDYLNCEK--el..................................................................................................................
A0A1H3DYM5_9FIRM/21-253             .......................k-PTVKCIYNREDPNKTLLNHML...T..Q...A..KD...YD..VFVVVGGFRISDLEDYInNVLSEEFR...N..KILLVNNEQYAEYGSGWSLYLGVKAVFD.kYGTSFSELLFAEGD.L.F.VDDSSFDA....VAG.S...L.S.S..VI..T....I..N..S.......E.PI..RAK..KAVA..LYYDLNE..VPHYIYDTSHGQL..SINEP.FTAVYNSGQI....WKF..TD..IEL...LNKLMNEMDVKCHE.GTNLV.LINE.YFQSL.....AKSGknIDVIPMN...TWINCNTINDFV------iagly...............................................................................................................
A0A1I2UK25_9FIRM/22-225             ..............pkcmthiyng--------------DSILSRQL...K..Q...L..KDi.eVN..DVVITTGYYHEKIQKYC.KNL--NLG...L..NIEFVKNEKYAETNYIYSIYKAMEYI--..---KGDDIILMHGD.L.V.FENEVLSK....VVE.S...T.K.S..VM..T....I..S..S......tK.PL..PEKdfKAVI..KEKVEDD..LEKKLDITERKIL..KVGVEfFNHAYYAQPL....YKL..LK..EDAkvwLEKIKEYCESGEKE.-----.----.-----.....----..-------...------------------kinsyaekafneisekcni.................................................................................................
A0A074M849_9BACL/20-156             ..............tmpkclvqvg-------------SKSILERFL...E..G...A..EEtgaFS..EVVLITGYLHDQIAAFV.DAWSQNHN...T..PVRLVHNERYDETNNGYTLLCAQEFL--..----RDGFVLTDGD.L.L.LDNEILRR....VAA.H...P.H.S..HL..A....V..D..M.......Q.SK..LDE..EAMK..FVLDEH-..-------------..-----.----------....---..--..---...--------------.-----.----.-----.....----..-------...------------------ghvtels.............................................................................................................
A0A3A9BS61_9BACT/46-275             .......................n-KQLKVIYQEDDSKDTLLYHLI...N..H...C..SF...AD..EIILVGGYKYDKLKEYVeKEAIDMTG...S..RLTMVFNCWYEDLASGYSFYLGLQEALK..-RENISEILYVEGD.L.D.IDKASFQS....VIE.N...R.H.S..VI..T....Y..N..H.......E.PI..YSN..KSVA..LYQTQDE..KYHYVFSSSHDLL..KITEP.FKCILNSGQL....WKF..KD..INT...LKKAYEHFDKTDKK.GTNLS.IIQD.YLDNI.....DVAT..ISLIPLQ...RWINCNTREDFTMIRKGW....................................................................................................................
A0A3A9GMU1_9FIRM/21-248             .......................r-SCLKCIYYEKDIRESLLYRIL...K..G...N..PQ...AD..KFVIVGGFLFEELKETI.DSKFGEFQ...D..KILLVKNEKFEEYGSGYSLYMGLLAI--..KNMEFDEVVFAEGD.L.W.VDGEDYTR....VWD.C...R.R.D..VI..T....C..S..R.......E.PV..LAS..KSVA..FYYDRNY..HIHYIFDTSHSLL..EIGQP.FRGIFNSGQI....WKF..VS..RKR...VLHVMDSLTEEEWK.ETNLK.FVQE.YFDGI.....DKEG..YELIEFK...KWINCNTVDDFLKIEN--ee..................................................................................................................
A0A1T4K4H3_9FIRM/23-252             ........................EKIHKSIYFEGEKKDTILFHLL...K..K...C..IF...AD..RIILVGGYKYDDIKDYI.DSLPDEYK...K..KITLTYNEHFEDLASGYSLYVGLNELFK..EKENIEEVLFIEGD.L.D.VDKTSFDK....IVK.A...D.K.S..VL..T....Y..S..F.......E.PI..YAK..KAVV..LYKDGED..RFKYAFNSSHGLL..KIDDQ.FSVILNSGQT....WKF..TD..INK...LKEANDEFYEKEKD.GTNLK.IIQN.YINRC.....SSDD..FCLVSID...RWTNCNTRDDYKKLLTYW....................................................................................................................
A0A1W2BU00_9FIRM/23-250             ........................QKILKAIYNEHNPQDTLLVHLI...E..K...C..AF...AD..RIIIVGGYMFDQLQSFV.SVNLQKSF...P..QLVLVRNDHYADLASGYSLYLGINKALD..LGAD--ELLFVEGD.L.D.IDDESFKK....IVD.A...E.H.T..VL..T....Y..T..T.......E.PI..YAN..KAVV..LYKNEED..RFQYAFNSVHGLL..RIDNA.FSCILNSGQA....WKF..DN..MEA...LKKANELFFSMKKD.GTNLW.IIQQ.YIDSV.....PSDT..ISLVKLE...RWTNCNTREDYNKILEGW....................................................................................................................
L1MYD3_9BACT/21-247                 .......................r-EVLKCIYYEESPKYALLYQLL...D..K...A..RD...LD..EYIIVGGYLFNQLETFC.NQELQEFR...H..KIKLIYNEHFLDYGSGYSLLKAIDSL--..-PPNTKNVIFVEGD.L.F.YTEEDFTK....IIE.S...K.K.N..VV..S....I..N..K.......E.PI..YAN..KAVV..LYLDTQQ..HIHYLYDTAHKAL..NIKEP.FCAVFNSAQM....WKF..ND..TNY...LQRVRKRLTNEQEE.GTNLE.LIDA.YFRDL.....ENGS..IDIIPIE...TWYNCNTVKDYHHVYKF-i...................................................................................................................
A0A1M5GLK2_9BACT/21-246             ........................KETLKCLYYKDSPKFALLNQLI...K..N...C..GE...YD..KYIIVGGYLYSALEEYV.KENLQAYG...D..KIELVYNEHFKDYGSGYSLYKGIEAV--..--KELGDVTFVEGD.L.F.FLKENFKK....VYD.S...E.K.S..VL..T....I..N..R.......E.PI..YSN..KAVA..LYVSTDG..RPHYLYDTNHSSL..TIPEP.FLAVFNSAQM....WKF..QS..AEK...LHEAVASLTEKQLQ.GTNLE.IIQA.YFNKL.....SREE..YDVVTFD...AWFNCNTVADYNIVHEL-m...................................................................................................................
A0A873WES6_9CAUD/18-257             .....................gdt---HKCLTPVGEYETPFIVKQM...E..KlneA..FD...IS..GFVIVVGHLSDSIQETL.GDDFRGV-...-..PIWYVVNPNYSEYGSGWSLLKGMEAIRNieYFDESSSMIVTEAD.C.L.IPTDQYKR....LNN.D...W.E.S..RC..L....I..G..-.......P.NI..NIN..KSVV..VTVREHDcrMDEFVYDREHNNVlvKVAHG.SYAIGESIQT....WFIgnKD..IDE...FEMTCMELMENAEE.ADKVD.WSNLiGFNTM.....LSKD..MTMVPVQydgTFINLNKPE---------dvelcna.............................................................................................................
#=GC seq_cons                       .......................t.chLKClYa-csscpoLL.phL...c..+...s..tp...sD..clIlVGGYha-pLccal.cs.hpcht...p..KIpLVaN-+apDhuSGYSLYhGl-tl......pphs-llFlEGD.L.h.hDpEsac+....lls.u...p.K.o..Vl..T....l..s..p.......E.PI..hus..KAVs..LYhspcs..c.+YlasosHuhL..pIs-P.FpsIaNSGQh....WKF..ps..hpt...Lccshpphppppcp.uTNLp.lIQt.YFsth.....ppps..h-ll.hp...pWhNCNThpDYphhhp......................................................................................................................
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