GenomeNet

Database: Pfam
Entry: DUF6877
LinkDB: DUF6877
Original site: DUF6877 
#=GF ID   DUF6877
#=GF AC   PF21793.1
#=GF DE   Family of unknown function (DUF6877)
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Pereira J;0000-0002-5588-6588
#=GF AU   Durairaj J;0000-0002-1698-4556
#=GF SE   Joana Pereira & Janani Durairaj
#=GF GA   24.40 24.40;
#=GF TC   24.70 41.20;
#=GF NC   24.00 18.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF WK   Domain_of_unknown_function
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This entry represents a small family of short uncharacterised
#=GF CC   proteins. They are predicted to adopt a three helical structure.
#=GF SQ   34
#=GS S5MC27_9CAUD/1-53         AC S5MC27.1
#=GS A0A0W7Y4H2_9BACI/10-62    AC A0A0W7Y4H2.1
#=GS A0A0A7RTM3_9CAUD/5-57     AC A0A0A7RTM3.1
#=GS A0A168R1Y6_9BACL/1-53     AC A0A168R1Y6.1
#=GS A0A127VYU4_SPOPS/1-53     AC A0A127VYU4.1
#=GS A0A0A7RWS5_9CAUD/5-57     AC A0A0A7RWS5.1
#=GS A0A0R2CJ19_9LACO/6-59     AC A0A0R2CJ19.1
#=GS A0A3S0QRW0_9BACI/7-52     AC A0A3S0QRW0.1
#=GS A0A0B5AMM7_9BACL/1-53     AC A0A0B5AMM7.1
#=GS A0A1P8Q4T8_9LACO/3-55     AC A0A1P8Q4T8.1
#=GS A0A1B1P7M4_9CAUD/1-53     AC A0A1B1P7M4.1
#=GS A0A5C0SD54_9CLOT/4-56     AC A0A5C0SD54.1
#=GS A0A345ARM3_9CAUD/4-56     AC A0A345ARM3.1
#=GS Q97JR8_CLOAB/8-60         AC Q97JR8.1
#=GS A0A1L4BZZ4_9LACT/1-54     AC A0A1L4BZZ4.1
#=GS S1RR44_9ENTE/5-50         AC S1RR44.1
#=GS A0A0A7RTW3_9CAUD/5-57     AC A0A0A7RTW3.1
#=GS A0A069DHV2_9BACL/11-56    AC A0A069DHV2.1
#=GS A0A5S5BRY4_9BACL/1-53     AC A0A5S5BRY4.1
#=GS A5N2E6_CLOK5/5-58         AC A5N2E6.1
#=GS Q9AZ73_9CAUD/8-53         AC Q9AZ73.1
#=GS A0A3G2KCM7_9CAUD/5-56     AC A0A3G2KCM7.1
#=GS A0A2D1SUI9_9BACL/7-52     AC A0A2D1SUI9.1
#=GS A0A062XE43_9LACO/4-57     AC A0A062XE43.1
#=GS A5VJP5_LIMRD/5-56         AC A5VJP5.1
#=GS Q835D0_ENTFA/5-50         AC Q835D0.1
#=GS A0A0K2CZ79_9CAUD/8-60     AC A0A0K2CZ79.1
#=GS A0A4P8XNL2_9BACL/2-55     AC A0A4P8XNL2.1
#=GS F9UQW7_LACPL/1-53         AC F9UQW7.1
#=GS K8E505_CARML/7-52         AC K8E505.1
#=GS A0A0R1ZI47_9LACO/131-183  AC A0A0R1ZI47.1
#=GS A0A417YJU3_9BACI/1-53     AC A0A417YJU3.1
#=GS C8P909_9LACO/4-55         AC C8P909.1
#=GS A0A660E6B6_9LACO/15-67    AC A0A660E6B6.1
S5MC27_9CAUD/1-53                    ..MTYLEQITKITGLLPLEVLIDINQRIGDWLAS.GGKEDDP..YIQQQLRFAEGFLN..
A0A0W7Y4H2_9BACI/10-62               .v-SPLYELHQIAYELPLNVLSDVKQRIGDWLAS.GGKETDP..YIKQQVAYAKNVY-q.
A0A0A7RTM3_9CAUD/5-57                .i-NSVKDILNNSKYIPAEVIQDIDKRISDWLAS.GGKKDDS..YIKQQFRYAERVAN..
A0A168R1Y6_9BACL/1-53                ..MNPMDELLKISHLIPFEPLQDINRRIGDWLAM.GGKQDDP..YIAQQLRYAKRYVR..
A0A127VYU4_SPOPS/1-53                ..MTAYQEIIKLLPQLPFEVLKDVERRTGDWMWS.GGNEDDP..YIHQQLRYDKRLL-g.
A0A0A7RWS5_9CAUD/5-57                .i-NSVKDILNNSKYIPAEVIQDIDKRISDWLAS.GGKKDDS..YIKQQFRYAERVAN..
A0A0R2CJ19_9LACO/6-59                .v-MAIKRLVNQHKF-PNTVLKDVLGRLQSNALG.NNDEQAKesYTWQQVRFLENWLR..
A0A3S0QRW0_9BACI/7-52                .a-QKINDLVGEYDF-PLPVLQDVDRRLSD----.--CQDPY..YAAQQLRYLENNI-h.
A0A0B5AMM7_9BACL/1-53                ..MKPLEEITKISSQLPLPVLQDINQRIGDWLAS.GGKETDS..YIHQQLRFAKRFVK..
A0A1P8Q4T8_9LACO/3-55                .e-SPIDRIIQLSDKLPYEIFADVRGRMDDWMLA.GGHQSDP..YMWRQVKFAERYIK..
A0A1B1P7M4_9CAUD/1-53                ..MNPLDEITKIAPQLPLKVLEDIAKRISDWIVS.GGKNDDP..YIEMQLRYAKRFIK..
A0A5C0SD54_9CLOT/4-56                .i-KTMQDLISNSKYLPQSVVEDINRRITDWLAS.GGNIDDD..YIQQQFRYAEKFVN..
A0A345ARM3_9CAUD/4-56                .n-DPLREILKISSELPTVVLQDINHRIGDWLAM.GGRNTDS..YIEQQLRFAKRFLN..
Q97JR8_CLOAB/8-60                    .i-NRLSDLIYCSGLLKPYIFNDIYQRVRDWIYS.GGTLKDD..YIKRQYKYAENVIN..
A0A1L4BZZ4_9LACT/1-54                ..MTYEERIQAALDKMPNDVAWDIDKRISDWLSGdGHKSDDP..YIYQQVRFAENAAK..
S1RR44_9ENTE/5-50                    ..WEKINQLVSEYRF-DQRVLDDVYNRLRD----.--RQDEA..YAKQQLRYLENCIR..
A0A0A7RTW3_9CAUD/5-57                .i-NSVKDILNNSKYIPAEVIQDIDKRISDWLAS.GGKKDDS..YIKQQFRYAERVAN..
A0A069DHV2_9BACL/11-56               .s-AEINKLIGEYDF-PLIALQDIKNRLSD----.--SDDPY..YAAQQLRYLNKLI-e.
A0A5S5BRY4_9BACL/1-53                ..MSYLQEIIDIAPKLPTPVLDDINRRIGDWLAM.GGSENDE..YIAQQLRYARRFV-s.
A5N2E6_CLOK5/5-58                    .i-KSMEDLNRNLNKLPIQAIEDINKRITDWMSGeGSSIDDP..YIKQQLRYAENLVN..
Q9AZ73_9CAUD/8-53                    .v-LQISEVISSFDF-PLSVVQDVNKRLSD----.--CQELG..YAKQQLRYLQNIKK..
A0A3G2KCM7_9CAUD/5-56                ..MERINQLLDEYDF-PLNAIQMVRERLGDWFIS.GGKPTDG..YVWQQARYLENLIR..
A0A2D1SUI9_9BACL/7-52                .d-QAISELISEYVF-PFEALVDVHTRL------.LGCTGVH..YAAQQLRYLQNLVN..
A0A062XE43_9LACO/4-57                .k-EKLVELLATYRY-PIAVINDVRMRVGDFYLS.GNSSDDNdpYLWQQVRYLENVKK..
A5VJP5_LIMRD/5-56                    ..MERINQLLDEYDF-PLNAIQMVRERLGDWFIS.GGKPTDG..YVWQQARYLENLIR..
Q835D0_ENTFA/5-50                    .e-EEINELLGKYNF-DLAVLKDINYRLSC----.--CREEA..YARQQLRYLKNQ--ii
A0A0K2CZ79_9CAUD/8-60                .n-DPLREILKISSQLPPVVLRDINQRIGDWLAM.GGRSTDS..YIVQQLRYARQTL-e.
A0A4P8XNL2_9BACL/2-55                .e-NPLDEILKISHLLPASVLQDINQRIGDWLAAmGGKDTDP..YIEQQLRFAKRFVK..
F9UQW7_LACPL/1-53                    ..MLPIEIIESLAPKLPFELLTDLNQRMMDWKAS.GGSDTDA..YMYQQSRAAENYYR..
K8E505_CARML/7-52                    ..MAEIDTLVSTYDF-PISVLQDVEKRLLD----.--YREVN..YAKQQLRYLENIV-a.
A0A0R1ZI47_9LACO/131-183             .s-EYASRLRAVSSKLPAEMLLDLKSRLGDWSLS.GGYMGSE..YVLQLVVNAERYA-a.
A0A417YJU3_9BACI/1-53                ..MTPLQEITNISDKLPLSVLKDIKQRIGDWLAS.GGNEDDP..YIEQQLRFARRFV-s.
C8P909_9LACO/4-55                    ..MERIQQLLEENEY-SLAQVNVIKIRLGDWFMA.GGGPNDA..YVWQQAHYLENLVK..
A0A660E6B6_9LACO/15-67               ll--PVQIIEILATLLPYELLSNVNQRMMDWKAS.GGKDDDG..YMYQQARVAENYYR..
#=GC seq_cons                        ...p.lp-llp.tshlPhpVLpDlppRluDWhhu.GGppsDs..YltQQlRYAcphlp..
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