GenomeNet

Database: Pfam
Entry: DUF746
LinkDB: DUF746
Original site: DUF746 
#=GF ID   DUF746
#=GF AC   PF05344.15
#=GF DE   Domain of Unknown Function (DUF746)
#=GF AU   Yeats C;0000-0003-0080-6242
#=GF AU   Eberhardt R;0000-0001-6152-1369
#=GF SE   Yeats C
#=GF GA   26.90 26.90;
#=GF TC   27.00 37.80;
#=GF NC   26.80 26.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF RN   [1]
#=GF RM   21348639
#=GF RT   Ab Initio Modeling Led Annotation Suggests Nucleic Acid Binding
#=GF RT   Function for Many DUFs.
#=GF RA   Rigden DJ;
#=GF RL   OMICS 2011;0:0-0.
#=GF DR   INTERPRO; IPR008008;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This is a short conserved region found in some transposons.
#=GF CC   Structural modelling suggests this domain may bind nucleic acids
#=GF CC   [1].
#=GF SQ   26
#=GS B9JG85_AGRRK/49-110       AC B9JG85.1
#=GS A0A4R0WLN6_9BURK/7-68     AC A0A4R0WLN6.1
#=GS A0A135HXU0_9HYPH/101-165  AC A0A135HXU0.1
#=GS A0A2T1AUR0_9BURK/358-416  AC A0A2T1AUR0.1
#=GS A0A1D9H747_9BURK/115-178  AC A0A1D9H747.1
#=GS Q63II2_BURPS/1-32         AC Q63II2.1
#=GS Q8XUK9_RALSO/243-306      AC Q8XUK9.1
#=GS Q63IL9_BURPS/94-157       AC Q63IL9.1
#=GS A0A3N6MXU4_9BURK/93-156   AC A0A3N6MXU4.1
#=GS B2JXE0_PARP8/255-318      AC B2JXE0.1
#=GS B2JXE0_PARP8/108-171      AC B2JXE0.1
#=GS A0A418WPN9_9SPHN/103-163  AC A0A418WPN9.1
#=GS Q8Y104_RALSO/102-164      AC Q8Y104.1
#=GS A0A2N7WFL9_9BURK/117-180  AC A0A2N7WFL9.1
#=GS A0A0C4YGJ0_9BURK/97-160   AC A0A0C4YGJ0.1
#=GS A0A3N6MXU4_9BURK/241-304  AC A0A3N6MXU4.1
#=GS A0A2T1AUR0_9BURK/102-163  AC A0A2T1AUR0.1
#=GS A0A4R0WQ66_9BURK/1-60     AC A0A4R0WQ66.1
#=GS Q63II2_BURPS/78-141       AC Q63II2.1
#=GS B9TBN6_RICCO/8-59         AC B9TBN6.1
#=GS A0A418WK00_9SPHN/212-255  AC A0A418WK00.1
#=GS A0A1D9H8R7_9BURK/108-171  AC A0A1D9H8R7.1
#=GS Q8XUK9_RALSO/95-158       AC Q8XUK9.1
#=GS Q63IL9_BURPS/242-305      AC Q63IL9.1
#=GS Q8Y104_RALSO/361-422      AC Q8Y104.1
#=GS A0A418W7Z3_9SPHN/103-163  AC A0A418W7Z3.1
B9JG85_AGRRK/49-110                  .......KLELFVRLLSQQRPITDAAEMIDVKVVTVIRWVKRMRQWIPELDPSGYWEARVRLGR-------hdals...
A0A4R0WLN6_9BURK/7-68                ....lyg----FLPLLSQHRPLAYAADELGTTPEIVKAWVRRSREWLLLMDPTGDFERRVRLGLK------aprpl...
A0A135HXU0_9HYPH/101-165             .....fk---DFLRLLSQQRPNNDAARILGVKAVTVARYVKRLRQWLLELDPSGYWEAKVRLGME------irpdaacp
A0A2T1AUR0_9BURK/358-416             ....lfa----FLPWLSQHRPLTHAAAEFGTSPEVIKAWVGRFRVWLLELDPSGRYEQRVRLGLK------vp......
A0A1D9H747_9BURK/115-178             ......k-LRAFFGIASHHWSVADAARQLGVSSETVLHWSLQTRLWLLELDPSGTWERRVQLGVHY-----rfvpa...
Q63II2_BURPS/1-32                    .....mt----------------------------------AWRAWLLELDPSGKWERRVRLSHRPP----hcpn....
Q8XUK9_RALSO/243-306                 .......RQRALIRYLGLPLSITQLAEIVGGDHGNVARLIREFRERCDQLDPTGQLSHRIRAGARPAEDTP........
Q63IL9_BURPS/94-157                  .......KLDLFVFLLSQPISCLEAGKQMGSLPDDIGQRVKVWRAWLLQLDPSGQWERRVRLGGRPTELNP........
A0A3N6MXU4_9BURK/93-156              ......n-LDLFISLLSQPVSCVEAGERMGSLPADVGRRVTAWREWLLRLDPGGRWERCVRLGGRPTELEP........
B2JXE0_PARP8/255-318                 .......RQRELIRYLGLPLPLAQLADMIDTDPAITARLVDEFRTRCAQLDPSGRLASRIRACVRPATDTP........
B2JXE0_PARP8/108-171                 ......q-AGELIALLPQEISCAEAARQLGVMEHTVLETVRLVRRWLLELDASGHYEPGVRLGGRFTAAQP........
A0A418WPN9_9SPHN/103-163             ....lag----FIGLLSQQKPYAQAADELGADIQLVRRWTMRFRAWLLELDPSGQWEARVRLGIAP-----pld.....
Q8Y104_RALSO/102-164                 .......KMPAFIRLLSQQISLEEASFRLGLDVECISNWLARFRQLILLHDPSGQWESRVRLGIKFQF---sg......
A0A2N7WFL9_9BURK/117-180             .......KLPAFVRLLSQQISYAKAADRLGVDYTAIANWTAKFRAWFRELDPTCEWERRVRLGLKPRA---lga.....
A0A0C4YGJ0_9BURK/97-160              .......KAEAFFNLASQQMSVAEAARRLGIKSETVRHWSIQTRLWLLTLDPQGDWERRVQLGVRYAV---lpa.....
A0A3N6MXU4_9BURK/241-304             .......RMREFIRYLALPLSIMQVSEIVGTSAGMAQKWRDMFAAFAGQLEPCGSLTSKIRLGVTPDGATP........
A0A2T1AUR0_9BURK/102-163             .......KVPAFVRLLGQPIPLEEASRRLRVDYTALSNWLMRFRELIAQDDPDARWASRVLLGVK------yrpe....
A0A4R0WQ66_9BURK/1-60                .......-MPEFFRLLSQPVPLEEVSRRLGVEYSAVSNWLMRFRQLIALHDPDGRWTPRVRLGLK------yrp.....
Q63II2_BURPS/78-141                  .......RMRLVIRRLSLPLLVMQVADLVGTSHGMVRKWHSMFTDFADRLEPSGSLSARIRLRSNSANAP-n.......
B9TBN6_RICCO/8-59                    .......KQRELIRYLGLPLGVTQVAEILSTDPLSIRRWIRSFSRRCAQLDPSGDW---------------lag.....
A0A418WK00_9SPHN/212-255             ....pms---------------------LGVDYRAVMRWTAAFRTWFIALHPSGAYEARVRLGMAP-----sls.....
A0A1D9H8R7_9BURK/108-171             rfaqifp-------LLARSMSLAEAARQLEVKAETVAHWSTQIRQWLLMLDPSGQWERRVQLGVHYAV---vpa.....
Q8XUK9_RALSO/95-158                  ......s-AEELITMLPQAIGCPEAARRLGVMERTIRNTVRMFRRWVLELDPSGHHERHIRLGGRFTAVR-d.......
Q63IL9_BURPS/242-305                 .......RMRLFIRHLSLPLSVMQAADLVGTSHGIIHKWLRMFIEFADQLEPSGSLSARIQLGVEPTETTP........
Q8Y104_RALSO/361-422                 ......a-LPHFIRLLSQQRPLHDAIDALKLDERIAKQWVGKFRSWLLQLDPSGHYEAMVRLGLKPAA---p.......
A0A418W7Z3_9SPHN/103-163             ....lag----FIGLLSQQKPYAQAADELGADIQLVRRWTMRFRAWLLELDPSGQWEARVRLGIAP-----pld.....
#=GC seq_cons                        ...........FlplLSQ.hslspAActLGss.psltcWltpFRpWllpLDPSGpaEtRVRLGh+..............
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