GenomeNet

Database: Pfam
Entry: DUF848
LinkDB: DUF848
Original site: DUF848 
#=GF ID   DUF848
#=GF AC   PF05852.15
#=GF DE   Gammaherpesvirus protein of unknown function (DUF848)
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_9475 (release 8.0)
#=GF GA   25.30 25.30;
#=GF TC   25.40 25.30;
#=GF NC   25.00 25.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF DR   INTERPRO; IPR008566;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   This family consists of several uncharacterised proteins from
#=GF CC   the Gammaherpesvirinae.
#=GF SQ   25
#=GS UL96_EHV2/6-150           AC Q66639.1
#=GS A0A6J2JZ67_BOMMA/221-329  AC A0A6J2JZ67.1
#=GS Q53D07_9GAMA/4-146        AC Q53D07.1
#=GS A0A0M4M471_9GAMA/4-148    AC A0A0M4M471.1
#=GS ORF35_HHV8P/4-147         AC F5HCD4.1
#=GS A0A1Z1NEA3_9GAMA/5-154    AC A0A1Z1NEA3.1
#=GS A1BM23_9GAMA/4-152        AC A1BM23.1
#=GS Q9WI12_BHV4/3-151         AC Q9WI12.1
#=GS A0A1P7U1M5_EBVA8/4-141    AC A0A1P7U1M5.1
#=GS Q76RH5_HHV8/4-147         AC Q76RH5.1
#=GS Q2MG96_EBVB9/4-141        AC Q2MG96.1
#=GS U5NM07_9GAMA/4-147        AC U5NM07.1
#=GS Q9YTN0_ATHV3/1-147        AC Q9YTN0.1
#=GS E9M5L9_9GAMA/17-162       AC E9M5L9.1
#=GS A0A060D311_9GAMA/3-153    AC A0A060D311.1
#=GS A0A2D1A5M6_9GAMA/3-134    AC A0A2D1A5M6.1
#=GS A0A3Q8J609_9GAMA/1-145    AC A0A3Q8J609.1
#=GS UL96_SHV21/1-147          AC Q01024.1
#=GS O41952_MHV68/4-149        AC O41952.1
#=GS A0A3Q8J5Z4_9GAMA/1-145    AC A0A3Q8J5Z4.1
#=GS Q993I4_9GAMA/4-148        AC Q993I4.1
#=GS A0A2Z5U6B8_9GAMA/3-150    AC A0A2Z5U6B8.1
#=GS UL96_ALHV1/3-152          AC O36384.1
#=GS A0A0F7GA26_SCMVC/1-124    AC A0A0F7GA26.1
#=GS A0A0B5D6F4_9GAMA/4-146    AC A0A0B5D6F4.1
UL96_EHV2/6-150                      .......r-DQ.QRDLIARGLEAEVNKRAAVSLFDRFGPSNPLFKKQYADTRLSLRSYHSC..SQT.ERVRASLELVNLTIETKNKERALLSK...LNRGAV..ARVEKLCDAVADLREEFDLELDS.LTAAQDD.PVEG.GPEP.....ADVAD.......TITEWRAEALPSVPA................
A0A6J2JZ67_BOMMA/221-329             dkrevtpt---.-----------------ACAVYDRVCRERAVLKRQLQETKMALADVKTSwsGQI.ASLETQVVRLNGEVHSLAMEVKSLRN...SAAHVG..EKTMELENRIEELNEENRQMHES.LENE---.----.----.....-----.......---------------rilvk...........
Q53D07_9GAMA/4-146                   ......at--A.KKLLIKSELESEINKKLSISVFDRFGADSAVFNAQYKGTRESLRSYDSL..KKK.DNLATVVGTLETSLREKQSELGLLKG...FNRKKI..EEFDAVTDAVRDLKDELYGELEI.LGTLNDE.SV--.PVEE.....ESPKD.......HIIRWKLERLPRVCP................
A0A0M4M471_9GAMA/4-148               ....snnl---.SKNLLSKYLEAEINKKTSISTFDRFGEKSVLFQKQFQDTKTSIKGYKTL..KQK.LNVESAIETINNTAESTYQEYLLLSH...YNLKKV..REVEKLCDKVRDLKEDFDFELQD.LIHRD-D.GQEN.THED.....EDVTD.......TILSWKLQGLPDAP-k...............
ORF35_HHV8P/4-147                    ........TNS.KREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGAL..KRE.AELGTLVRKAGQRFEALKRERSILRQ..pRDLPRV..ADIDALVDAVADLKEEVAVRLDA.LEENGEE.TP--.THSS.....SEIKD.......TIVRWRLDDLPPVCP................
A0A1Z1NEA3_9GAMA/5-154               .......k-NS.KRELIRRALEAGVNKSASVAIYSQFGRDHCIFRTQYKTTQDTIARLHNL..ERA.QRLSGKGTLLEASIAEYQSRLRQIRT...FDPARV..KVLEDLKDQVAELEDELHAELDT.LERDAET.SAVE.VSDE.....CDRRHdr..veaDIFQWRIQAAPRVC-g...............
A1BM23_9GAMA/4-152                   .....yat---.TKEQIRLDIELAVQKRVAVSVADRFGTHSSLFRQQFEQTNCLGRRARKV..EQL.QDIRNKVDSLHTEIANRSKEVEALLH...FDPKKV..DALEALSERVDELKTDLDFEVDR.VQSLQDE.QYAA.QSDTlpgrgRELED.......TLLQWRLERAPTC--g...............
Q9WI12_BHV4/3-151                    .srnkkia---.--ELFKINLLSEVNKKTSVSLFDRFGEHSDIFLQQFEVTQKNLQDCNQL..RQS.TKVDNIISFVESTIRSQEKQLETLLK...FDKKKL..ERAEALTNRVSDLSEDIQAELSF.LTSEGGDgTNIShGSED.....DTTRD.......TIMHWRLGTIPDVPA................
A0A1P7U1M5_EBVA8/4-141               .......s-SS.KRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRRA..RET.FESKQLISTYQRVVTATKTQFPK---...INYKQL..ERVEELREQELEARDELRQALEP.FEEHGCE.YGCGvEPDE.....-----.......LLQQWRVECLPRTPS................
Q76RH5_HHV8/4-147                    ........TNS.KREFIKSALEANINRRAAVSLFDRFGGSSAVFEKQFQDAQHAVRAHGAL..KRE.AELGTLVRKAGQRFEALKRERSILRQ..pRDLPRV..ADIDALVDAVADLKEEVAVRLDA.LEENGEE.TP--.THSS.....SEIKD.......TIVRWRLDDLPPVCP................
Q2MG96_EBVB9/4-141                   .......s-SS.KRDLVAQQLRASVEKRAAVSARDRFGRDHALFETQFTSARGALESLRHA..RET.FESKQLISTYQRVVTATKTQFPK---...INYKQL..ERVEELREQELEARDELRQALEP.FEEHGCE.YGCGvEPDE.....-----.......LLQQWRVECLPRTPS................
U5NM07_9GAMA/4-147                   .......r-NT.KRDFIKSALTVDVQRKTAVSLFDRFGAGSAIFERQFIDARAAERSHGTL..QRQ.TKLRDLAREVHQKFENAKKERVALGD..hRALPST..EEIDALGDTVADLKETVTARLDA.LEEHGVD.CPGD.GTE-.....-EVQD.......TILHWRLGRLPPMCP................
Q9YTN0_ATHV3/1-147                   .......m-NSnRKKFLCSAFEAEINKKTSVSLFDRFGESNCLFLHQLDTTKKSLIKHENL..KKQ.KSIEGMLQEVNLSIQEKKKELSLLKT...FDRHKL..SDTEDLQDKISELTEDLQFEIEA.LNHGQSS.SQEEeSSSE.....NTVTG.......TIMRWRIEALPRVPS................
E9M5L9_9GAMA/17-162                  ....ktvl---.-KRLIGTAFKSGVEKKTAVSVYDRFGPQNPLFVAQYSCAKGAEAELSKS..REL.YDSAQLSNSLHKALSHKKQELAHLRA...CAKISV..GELEKLTDDIFEARENIEDISSY.LLNSEGE.SPEDlNQQH.....GNCTD.......DILQWRIDEIPSVP-r...............
A0A060D311_9GAMA/3-153               ....qrtl---.TKEHIRNNLEIAINKQVSVNAADRFGIDSFLFKKQFEETQELIKFTKRK..QHL.STFNKKVCGIDAEIKSKEQELLALSA...FDKRKV..ARLENLAEKVAELRDDLELELSS.YQEDDGSgCGCCaEHEE.....-GLFDsdrdpsdTILQWRLARAPR---................
A0A2D1A5M6_9GAMA/3-134               .......s-NT.PRQLVTRALEAEVNQRLAASLLDRFGGNSSIFLQQYETARASIASHAAL..RRR.AEAEARLGALRSAFLDKRAEYELLVShsgRGRGALaaEAVGELCDAVEDLGEDLREAVDL.L------.----.----.....-----.......---------------lppspppsggfrqstd
A0A3Q8J609_9GAMA/1-145               ......mt---.HKALLSQQLLVEVNKRMSISTHDRFGPEHSIFTVQYGSTTDSIKCLNHI..TNR.ALIKRFSLNAQQSHDAALSELSGLTG...VDPKIF..LDTEKIRDQVEDKLDEIREHTEA.PVLSELV.SPNSiYNVS.....TDIQD.......TIAAWRLESLPR---pan.............
UL96_SHV21/1-147                     .......m-NSnKKEFLYSAFETEINKKASVSLFDRFGGKSCIFLHQLDHTKKSLIKHENL..KRQ.KSIEGMLQAVDTSIQEKRKELSLLKA...FNRHKL..TAAEDLQDKILELKEDIHFEIES.LNNGQPS.SQEEeNSSE.....TSIPD.......TIMQWRIEALPRVPS................
O41952_MHV68/4-149                   ....klla---.-KKLIGSSLRADIEKRAAVSLTDRFGKSHSLTQFQYTKAKRAERTASSA..REHcHRIENMVS-TKRELSDCVSELTHLKE..iCQNFSV..EDAERLIEETTVLKEELEDTVNT.VSAALQR.EESL.SADS.....EQEES.......DITCWRLDGLPTVT-a...............
A0A3Q8J5Z4_9GAMA/1-145               ......mn---.NRMLLAQHLMVEVNKRISVSTHDRFGPEHGLFAIQYGSTSDSIRRLEHI..TNA.SLIHKIYETASSSHNAAVDELATLSR...IHPKLF..TDTEKLRDKIEDRLDEIREYADPgLSSDLPE.RREY.CCSS.....NDVTD.......TIASWRLESLPRP--as..............
Q993I4_9GAMA/4-148                   ......ak--T.KRDLIAQQLRASIEKKVAVSTCDRFGEDHVLFHNQLLAAQESVRELNRT..RSD.LELKSLVSDYKCILSRSRRLRGTLPI...INHREL..ELAEDFQDRLEETCSEIKEALAP.FKRDGGE.HGNGyEFDE.....-QPAD.......IVERWRLEQLPSVP-k...............
A0A2Z5U6B8_9GAMA/3-150               ....sskk--Q.SVDLIARGLEADVNKKTSVSIFDRFGGKSPLFKKQFEDTKLSLKRYNSV..KQR.SGIQSSLNLLDDTLESKSRELHLLSS...FNKSKI..TRLEKICEAVTELREDFDFEIDN.LKTVEDE.PTTRgDSEP.....DDIAD.......TIMEWKTDMLPSVP-i...............
UL96_ALHV1/3-152                     .......p-QS.MKEQIRLDIELAVQRRVAVSVGDRFGTQSALFRRQFDEANAVSHRVQQT..ERL.RAIKNKVVYLTTEIENRTKEVESLIR...FDPKKV..DILEELTDKVEELEANVSFEVDR.IQGYQER.YH--.GGQQ.....TSLPDcngeletTLTQWRLEQAPRCPP................
A0A0F7GA26_SCMVC/1-124               ......mt-SA.NKDLLKAVMRLELEKKQNLFLRRAYGPQHRVTKHHHLKVMQTAAREQTR..YSQ.VAVTQVAANVVRERESLKKELQR--A...RALQKA..TDADELLDSLMELKDTVEDVCET.FV-----.----.----.....-----.......---------------dsvsntcevdlvg...
A0A0B5D6F4_9GAMA/4-146               ......at--A.KKMLIKSELESEINKKLSISVFDRFGADSAVFSAQYKGTRESLRSYTNL..KKK.DDLATVVGTLETSLREKQSELEILKA...FNRKKI..AEFDTVADAVRDLKDELYGELEV.LGTLEDE.SL--.PVEE.....ESPKD.......DIIRWKLERLPRVCS................
#=GC seq_cons                        .......p..t.p+-LlppsLcuplNK+suVSlaDRFGscsslFppQapssppul+phpsl..+cp.tplcshlsplppslpspppElptLpp...hsh+cl..pchEcLpDpVt-L+--lctcl-s.Lpptts-.s.tt.sspp.....pphtD.......sIhpWRl-pLPpss.................
//
DBGET integrated database retrieval system