#=GF ID DdrB
#=GF AC PF12747.11
#=GF DE DdrB-like protein
#=GF AU Bateman A;0000-0002-6982-4660
#=GF SE Bateman A
#=GF GA 25.00 25.00;
#=GF TC 25.40 25.00;
#=GF NC 22.50 19.80;
#=GF BM hmmbuild --amino HMM.ann SEED.ann
#=GF SM hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 19515845
#=GF RT DdrB protein, an alternative Deinococcus radiodurans SSB induced
#=GF RT by ionizing radiation.
#=GF RA Norais CA, Chitteni-Pattu S, Wood EA, Inman RB, Cox MM;
#=GF RL J Biol Chem. 2009;284:21402-21411.
#=GF RN [2]
#=GF RM 15454524
#=GF RT Analysis of Deinococcus radiodurans's transcriptional response
#=GF RT to ionizing radiation and desiccation reveals novel proteins
#=GF RT that contribute to extreme radioresistance.
#=GF RA Tanaka M, Earl AM, Howell HA, Park MJ, Eisen JA, Peterson SN,
#=GF RA Battista JR;
#=GF RL Genetics. 2004;168:21-33.
#=GF DR INTERPRO; IPR024305;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC This family includes the Deinococcus DdrB protein which is a
#=GF CC ssDNA binding protein. This family also includes some possibly
#=GF CC distantly related cyanobacterial proteins. However, these are
#=GF CC not strongly supported. The structure of DdrB is known.
#=GF SQ 48
#=GS A0A0N7Z5C8_9CYAN/4-100 AC A0A0N7Z5C8.1
#=GS A0A1Z4J8N6_9CYAN/3-119 AC A0A1Z4J8N6.1
#=GS DDRB_DEIGD/3-134 AC Q1J1N6.1
#=GS L0A1X9_DEIPD/4-134 AC L0A1X9.1
#=GS F0RKG2_DEIPM/3-134 AC F0RKG2.1
#=GS A0A1U7NTZ4_9DEIO/8-140 AC A0A1U7NTZ4.1
#=GS A0A2Z3JLX7_9DEIO/4-135 AC A0A2Z3JLX7.1
#=GS E0UNT5_GLOV7/9-149 AC E0UNT5.1
#=GS A0A8J7ETU4_9CYAN/14-116 AC A0A8J7ETU4.1
#=GS A0A7C9HU96_9DEIO/3-134 AC A0A7C9HU96.1
#=GS E4UAW0_OCEP5/4-130 AC E4UAW0.1
#=GS A0A1Z4J8R4_9CYAN/4-119 AC A0A1Z4J8R4.1
#=GS A8ZRB7_DEIGD/1-40 AC A8ZRB7.1
#=GS A0A2K3UWT5_9DEIO/3-134 AC A0A2K3UWT5.1
#=GS A0A399EG76_9DEIN/4-123 AC A0A399EG76.1
#=GS A0A0D8ZYD1_9CYAN/13-137 AC A0A0D8ZYD1.1
#=GS A0A1U7IZ66_9CYAN/1-106 AC A0A1U7IZ66.1
#=GS B7KLR7_GLOC7/9-149 AC B7KLR7.1
#=GS A0A2T1EMB9_9CHRO/4-114 AC A0A2T1EMB9.1
#=GS H8H1D9_DEIGI/9-140 AC H8H1D9.1
#=GS A0A1W1V8F7_9DEIO/3-134 AC A0A1W1V8F7.1
#=GS A0A2T1E4A3_9CHRO/4-113 AC A0A2T1E4A3.1
#=GS A0A1U7P363_9DEIO/3-134 AC A0A1U7P363.1
#=GS H8H3G8_DEIGI/3-134 AC H8H3G8.1
#=GS A0A2T1BWV4_9CYAN/3-113 AC A0A2T1BWV4.1
#=GS A0A511N9G1_DEIC1/26-156 AC A0A511N9G1.1
#=GS A0A418V750_9DEIO/3-134 AC A0A418V750.1
#=GS A0A0F5YJG3_9CYAN/5-94 AC A0A0F5YJG3.1
#=GS DDRB_DEIRA/3-134 AC Q9RY80.2
#=GS A0A221T2W8_9DEIO/16-150 AC A0A221T2W8.1
#=GS L0A2Z8_DEIPD/3-134 AC L0A2Z8.1
#=GS A0A2T1LT99_9CHRO/4-113 AC A0A2T1LT99.1
#=GS C1CZ80_DEIDV/3-134 AC C1CZ80.1
#=GS A0A172TB48_9DEIO/3-134 AC A0A172TB48.1
#=GS A0A072NCA4_9DEIO/3-134 AC A0A072NCA4.1
#=GS A0A841I409_9DEIO/4-135 AC A0A841I409.1
#=GS F0RQB5_DEIPM/3-134 AC F0RQB5.1
#=GS A0A0D8ZW08_9CYAN/2-112 AC A0A0D8ZW08.1
#=GS H8GUU4_DEIGI/3-134 AC H8GUU4.1
#=GS A0A318SAR6_9DEIO/3-134 AC A0A318SAR6.1
#=GS E0UNF6_GLOV7/11-133 AC E0UNF6.1
#=GS E8UBG4_DEIML/3-134 AC E8UBG4.1
#=GS B7KML8_GLOC7/9-149 AC B7KML8.1
#=GS E0UMQ6_GLOV7/11-149 AC E0UMQ6.1
#=GS A0A221SSZ4_9DEIO/3-134 AC A0A221SSZ4.1
#=GS A0A0F7JQH2_9DEIO/3-134 AC A0A0F7JQH2.1
#=GS D7BJE6_MEISD/2-120 AC D7BJE6.1
#=GS A0A1Y0RE37_9CYAN/6-114 AC A0A1Y0RE37.1
A0A0N7Z5C8_9CYAN/4-100 ......................dtlkellivlkvlagsnpp---------------------------------.---------......................NWQRPLKNYKEFDWSKIGATP.ISQdEHGVT...KVVWCGHVYTRRSGE-----NRKFGAAIWFSRANGKGE--------GDETNYLKLITFKD-s........
A0A1Z4J8N6_9CYAN/3-119 .......................peqihtwlqiqqrqtlal---------------------------------.EKMAALAERmtaaler........laprtapNYQYSLESFKTFDWSAIGATV.ERKdQHGAA...IVSWNGQQYIRRSPS----N--KFDPAIWFSRCTGKAE--------DGSNAYERLITFK--p........
DDRB_DEIGD/3-134 .........................................HIEFITDLGAKVTVDVESADKLLDVQRQYGRLG.WTSGEVPVG......................GYQFPLENEPDFDWSLIGARK.WTN.PEGEE...MILHRGHAYRRRELEAVDSRKMKLPAAVKYSRGAKNTDPEHVREKADGEFEYVTLAIFRG-g........
L0A1X9_DEIPD/4-134 .......................................ql--HLTGPLGEQITVAFEEGGQF-RALAQWGAQG.YHSGEIPAG......................GFQLPLENESDFHWALLGGRK.FTS.DDGDA...CVWCRGHVWKRRELAAVDTRKMRLPAAVKYSRGAKPTDPPHLVETGEGDIGYVALAVFRG-g........
F0RKG2_DEIPM/3-134 .........................................HIEFITDLGAKVTVDVERPEQVLDVQRHYGRLG.WTSGEVPAG......................GFVFPLDNEPDFDWALIGARA.WTN.PEGEV...MILHRGHAYRRRELEAVDSRKLKLPKAVKYSRGAKPTDPEHLREKADGEIEYVTLAIFRG-g........
A0A1U7NTZ4_9DEIO/8-140 .....................................tlal----LDALGTPITVQAQTIADLRTLQRHYGAQG.MRPASAPIG.....................gGLQLPLAAHDTFDWSLIGARP.WVT.PEGEH...VVFCGGHAYKQRLLEEVETRKMKLPEAVKYSRGAKATDPEHLREKGDADFWYVTLVMFRG-g........
A0A2Z3JLX7_9DEIO/4-135 ........................................q-IHLVGPLGTSISVEVQEEREIFPALRKYGKSG.WSSGELPPG......................GVSLPLAMADIFDWNLIGARP.YTN.AEGEA...CVMYRGQSYKRRELDEVDTKKIKLPKIVKYSRGARPTDLPHLKEGEEGGVQYVTLISFRG-g........
E0UNT5_GLOV7/9-149 ......................................nsa----IETLLNPVVSKDKGTQNLWVLLRDVKNLL.SQQNELLQEnnqllrqllqkeatsnyeefepNFKATLSEYKHFAWDSIGAKV.ISSdGEGVT...VVQYRSKVFERRRSSVDDVKG----AAIWFSCATKATD---------GKVKYLKLITFREK.........
A0A8J7ETU4_9CYAN/14-116 ...............tpdilaqiciqleriatvleaqpqpa---------------------------------.--------P......................DIVRDLADYPGFAWNSINAEI.IAKdKHGAI...AVRHGGKIYTRRCPV----N--KFGVAIWYSRATGKDG---------DETIYERLVTFK--ev.......
A0A7C9HU96_9DEIO/3-134 .........................................HLEFMTDLGARVTVDVESADKLLDVQRHYGRLG.WTSGEIPTG......................GYQFPLDNETDFDWTLIGARR.WTN.PEGEE...MVIHRGHAYRRRELEAVDSRKMKLPAAVKFSRGAKSTDPEHVREKSDGEFEYVTLAIFRG-g........
E4UAW0_OCEP5/4-130 .........................................KVRFETPIGVPVEAELEDGEDLYAVLRERGAAG.WTAVRLRYQ......................GIVLPLACERCFDWRLLGAKV.VES.GGFVE...AVTLGGAVYKRRDLA----ERRDLPRVIKYSRGAREGDPPHLVEGSNQD-RYVTLVRFVG-e........
A0A1Z4J8R4_9CYAN/4-119 .....................eqihtwlqiqqrqtlalekm---------------------------------.--AATLEKMtaaler.........laprtapNYQYPLSSFKTFDWSAIGATV.ERKdQHGPA...VVSWGGQQYIRRSPS----N--KFDPAIWFSRCTGKAE--------DGSNAYERLITFK--p........
A8ZRB7_DEIGD/1-40 ........................................m---------------------------------.---------......................---------------------.---.-----...----------------------KLPAAIKISRGAKNTDPAHVREQAEEEFEYVTRCIFRG-s........
A0A2K3UWT5_9DEIO/3-134 .........................................HIEFITDLGARVIVDVDSADKLLDVQRQYGRLG.WTSGEIPSG......................GYQFPHDNEPDFDWSLIGARR.WTS.PDGEE...LVIHRGHAYRRRELEAVDSRKMKLPAAVKYSRGAKSTDPEQVREKSDGEFEYVTLAIFRG-g........
A0A399EG76_9DEIN/4-123 .........................rlhltsplghglelea-----------------TAEDYLELLREWGAKG.YRPAPPPPG......................GYVLPLACAGCFDWAFLGARE.LDS.----E...TVEAFGFRWRRRHLA----GRRDLPEVVKFSRGAWQFEEE-GVEGKRQG--YVTLVRFE--gp.......
A0A0D8ZYD1_9CYAN/13-137 qrleieatnriadaiekltammekmlkvsdtleriallidr---------------------------------.--M--LPAKa....................pDVVFDISQFATFDWASIGVVV.VQKdESGPT...VVNWRGQPFFRRSPN------NKFAAAIWFSRCIGKDE--------RGENTYERLCTFK--sl.......
A0A1U7IZ66_9CYAN/1-106 ...................................mtdnta-----------------------DLARALKQIE.VATMAIAASn...................ppNWKRPLSAYKNGWVAAIGAIE.VAHdDHGPT...VIWWMGHHYTRRSGS-----NPKFGAAIWFSRSMGKGE--------DGEASYVRLITFAD-g........
B7KLR7_GLOC7/9-149 ......................................nsa----IETLLNPVVSIYKGTQNLWVLLRDVKNLL.NRQNQLLEKnnelleqlltkeitsnteefepNFKAMLNEYKNFDWDTIEARV.ISSdGEGVT...VVQYRGKVFERRRSSVDDVKG----AAIWFSSATKTPD---------GKVKYLKLITFREK.........
A0A2T1EMB9_9CHRO/4-114 ...........qdsqtylqlqqliseslsriaialehmipp---------------------------------.--------Qa...................apNYQFALDKFATMDWESIGAVV.ADYdSDGVS...TILWRKHIYLRRSSS------NKFGAAIWFSRCVGKDE------R--GENKYECLIKF---kam......
H8H1D9_DEIGI/9-140 .................................ivllnaln---------IEHTVYLSNPGEVLSTIREWVGKGyRPKIDVPAG......................GIQLPYAQHDLFDFTLLGARP.AVS.HEGEM...GVWHDGHFYKKRVLEAVDSRKLKLPPAIKYSRGAKTTDPAHLREKSDGEFEYVTLVIFRG-r........
A0A1W1V8F7_9DEIO/3-134 .........................................HIEFITDLGARVTVDVESADKLLDVQRHYGRLG.WTSGEVPLG......................GYQFPLDNEPDFDWTLIGARK.WTN.PEGEE...MVLHKGHAYRRRELEAVDSRKMKLPAAVKYSRGAKNTDPEHVREKADGEFEYVTLAIFRG-g........
A0A2T1E4A3_9CHRO/4-113 ........enlqfflrtqqliiesltriaialelmippksa---------------------------------.--------P......................NYQFALDKFATFDWASIGAVV.VDRdIDGAS...AILWRNNIYVRRSPS------NKFESAIWFSRCTGRDE------KGAN--IYERLITF---ka.......
A0A1U7P363_9DEIO/3-134 .........................................HIEFITDLGAQVTVDVESADKLLDVQRQYGRLG.WTSGAVPGG......................GYQFPLDNEADFDWSLIGARK.WTN.PEGED...MVIHKGIAYRRRELEAVDSRKMKLPAAVKYSRGARGTDPEHVREKADGEFEYVTLVIFRG-g........
H8H3G8_DEIGI/3-134 .......................................ll--RLRTDLGADVTVEVPSPDKLLEVQAYYGARG.WTSGEVPSG......................GYQFPYDNEVDFNWALIGARK.FTN.SEGEE...MIMHRGHAYRRRELEAVDSRKLKLPAAIKYSRGAKNTDPPHVREKADAEFEYVSLAMFRG-g........
A0A2T1BWV4_9CYAN/3-113 ...............pqqidllleiqhrqmvalekiaitle---------------------------------.--------Kltp...............nnapNYQYPLESFKTFNWQSISATV.EQTdNYGAT...VVTWSGQQYIRRSPA------NKFEPAIWFSRCTKKKE--------DGTNEYERLITFKS-l........
A0A511N9G1_DEIC1/26-156 .....................................elhl----TGILGTKITVHVKDEDEMLRVMRQYGRRG.WTSGEIPAG......................GLILPLSMADTFDWSLIGARE.FTN.SEGEK...SVYHKGQVYKRRELEEVDTKKLKLPRIVKYSRGARPTDPEHLKEGE-ESVRYVTLITFRG-n........
A0A418V750_9DEIO/3-134 .........................................HIEFLTDLGARVTVDVDSPDKLMDVQRQYGRLG.WTSGDIPSG......................GYQFPLDNEQDFDWSLIGARK.WTN.PEGEE...MVLHRGHAYRRRELEAVDSRKMKLPAAVKYSRGAKSTDPEHVREKSDGEFEYVTLAIFRG-g........
A0A0F5YJG3_9CYAN/5-94 ............................ldklatssmlstd---------------------------------.-----SKAP......................AYQVDIKSFPKFDWDSIGATV.VECdRDGVS...IVRWGGRDFKRRAKQ----------NAVWFSRSLGEGE--------NGRVEYEVLVRFK--pt.......
DDRB_DEIRA/3-134 .........................................QIEFITDLGARVTVNVEHESRLLDVQRHYGRLG.WTSGEIPSG......................GYQFPIENEADFDWSLIGARK.WKS.PEGEE...LVIHRGHAYRRRELEAVDSRKLKLPAAIKYSRGAKVSDPQHVREKADGDIEYVSLAIFRG-g........
A0A221T2W8_9DEIO/16-150 ........................................t-IHVTNNLGHQGSMTLPNVQAAMDVIREVSRLG.YRCGTVPPG......................GIELPMRMFPVFDWSVIGADKpFIV.GEGADaklMVRHGGFVYSHRWGPAVSSAKLKLPAKVWFSRGAKQTDDEQAKQ-GTDAIEYVRLISFSG-s........
L0A2Z8_DEIPD/3-134 .........................................HIEFTTDLGAKVTVDVEGPETLLDVQRRYGKQG.WYSGDVPAG......................GFQFPLDNEADFDWSLLGGRK.FVL.EDGEE...AVYCRGSVWKRRELAAVDTRKLRLPAAVKYSRGARPTDPEHLREKSDGDIEYVTLAIFRS-g........
A0A2T1LT99_9CHRO/4-113 .............nqfqqwlklqerqvaalekiaialdrla---------------------------------.---PEKPAP......................NYKQSLKNFPTFDWSSIDAEV.EKMdRYGAA...IVIWNNQRYVRRSPE--NSYG----AAIFFTRCVGKDE--------TGKNKYERLITF---ep.......
C1CZ80_DEIDV/3-134 .........................................HIEFLTDLGAKVTVDVEHENQLLDVQRHYGRLG.WTSGAVPTG......................GYQFPLDNEPDFDWSLIGARK.WTS.PDGEE...LVIHKGHAYRRRELEAVDSRKMKLPAAVKFSRGAKSTDPEHLREKADGEFEYVTLAIFRG-g........
A0A172TB48_9DEIO/3-134 .........................................HIEFITDLGARVTVDVDSADKLLDVQRQYGRLG.WTSGELPSG......................GYQFPFDNEADFDWALLGARK.YTT.PEGEE...MVYHKGHGYRRRELEPVDSRKMKLPAAVKYSRGAKNSDPDHVREKADGEFEYVTLAIFRG-g........
A0A072NCA4_9DEIO/3-134 .........................................HIEFITDLGAKVTVDVESADKLLDVQRQYGRLG.WTTGEIPAG......................GYQFPFDNEPDFDWALIGARK.WTS.PDGEE...LILHRGHAYRRRELEAVDSRKMKLPAAVKYSRGAKNTDPDHVREKADGEFEYVTLAIFRG-g........
A0A841I409_9DEIO/4-135 .........................................RVEFVTDLGARVSLEVQNENELLEVQRRYGRLG.WYSGDVPPG......................GFQFPLDNEPDFDWALLGGRK.FKN.DEGED...CVWCRGAVYKRRELAAVDTKKLRLPAAVKYSRGARPGDPDYLREKSDGEIEYVTLAIFRG-g........
F0RQB5_DEIPM/3-134 .........................................HIEFTTDLGAKVTVDVERPEQVLDIQRHYGRLG.WTSGEVPAG......................GYQFPLDNSDDFDWALIGARE.WTN.PEGET...MILHRGHAYRRRELEAVDSRKLKLPKAVKYSRGAKPTDPEHLREKGDGEIEYVTLAMFRG-g........
A0A0D8ZW08_9CYAN/2-112 .....................................ttgl-------------------RAIYKLLHENNRLL.E-------Rianslea........sapkeapNFQLRLEEFATFDWASIDATV.ERHdAQGAA...IVTWKGKQFVRRSPT----N--KYSPVVFFSRCIGKDE--------QGENQYERLCTFK--sv.......
H8GUU4_DEIGI/3-134 .........................................RIEFVTDLGARVSVEVESADKLLEVQRQYGRLG.WTSGEVPQG......................GYLFPLDNEQDFDWSLIGARK.FTN.NEGED...MVMHRGHAYRRRELEAVDSRKLKLPAAIKYSRGAKNTDPEHVREKADGEFEYVTLAIFRG-g........
A0A318SAR6_9DEIO/3-134 .......................................ql--HLTGPLGTSISVEVQDEREILTTLRKYGKSG.WTSGDLPAG......................GLVLPLSMADLFDWSLIGARP.YVN.NDGES...CVLYKGQTYKRRELEEVDTKKLKLPKIVKYSRGARPTDLPHLKEGDEGGVQYITLITFRG-g........
E0UNF6_GLOV7/11-133 ......................................nsa----IETLLNPVVSKDKGTQNLWVLLRDVKNLL.SQQNELLQEnnqllrqllqkeatsnyeefepNFKATLSEYKHFAWDSIGAKV.ISSdGEGVT...VVQYRSKVFERRRSSVDDVKG----------------------------------------aarkvflcn
E8UBG4_DEIML/3-134 ......................................tlh---LTGPLGTSISVDVQDDRDILNTLRKYGKGG.WTSGDIPAG......................GLSLPLAMADNFDWTLIGARP.YTN.ADGEQ...AVMYKGQSYKRRELDEVDTKKLKLPKIVKYSRGARPTDPPHLKEGEEGGVQYVTLISFRG-n........
B7KML8_GLOC7/9-149 ......................................nsa----IETLLNPVVSIYKGTQNLWVLLRDVKNLL.NRQNQLLEKnnelleqlltkeitsnteefepNFKAMLNEYKNFDWDTIEARV.ISSdGEGVT...VVQYRGKVFERRRSSVDDVKG----AAIWFSSATKTPD---------GKVKYLKLITFREK.........
E0UMQ6_GLOV7/11-149 .......................................rf-----DSLLNPVVSILQGLRELFVLVREVKNLL.AQQNELLKQnnellqnlldkenssnqvevnpNFQAGLSDYPTFDWAKIGATV.ISTdSDGPT...VVEYEGLAFKRRRSSIDDVKG----AAIWFSCSQKDNK---------DQLTYLRLITFKEQ.........
A0A221SSZ4_9DEIO/3-134 .........................................HIEFLTDLGAKVTVDVDSADKLLDVQRQYGRLG.WTSGQVPVG......................GYQFPLDNEPDFDWTLIGARK.WTN.PEGED...MVIHKGHAYRRRELEAVDSRKMKLPAAVKYSRGAKSTDPDHLREKSDGEFEYVTLAIFRG-g........
A0A0F7JQH2_9DEIO/3-134 .........................................HIEFTTDLGAKVTVDVENASALLDTQRQYGRLG.WTSGEIPSG......................GYQFPLENEPDFDWHLIGARK.WTS.PDGEE...LVIHKGHAYRRRELEAVDSRKMKLPAAVKYSRGAKSTDPEHIREKSDGEFEYVTLAIFRG-g........
D7BJE6_MEISD/2-120 ......................................rlv---LQTPLGHTVVLETT-PQTWLEDLRTWGAKG.FRPAAPPPG......................GFVLPLECHRCFDWAFLGATA.---.-EG-E...YVQAFGYRWKRRHLP---A-RQGLPEQVKYSRGAWQYEEE-GVEGKRQG--YVTLIRFE--gp.......
A0A1Y0RE37_9CYAN/6-114 ..............ielwleiqhrqmlalekiadtlerlap---------------------------------.---TNVPAP......................NYQYPLESFTRFNWESIGATV.VTNdQYGAA...VVSWRGKQFIRRSPS------NKFGEAIWFSRCIGKDD--------SGENRYERLVTFK--p........
#=GC seq_cons .............................................htsLhs.lssthpt.pplhpl.RphsphG.hpsuplPsu......................GaQhPLcs.ssFDWuhIGA+h.hss.s-Gtp...hVha+G+sY+RRchp.sDs++hKLPuAlKaSRGA+ssD...hhEtt-G-hcYVsLshFRu.u........
//
