#=GF ID   ExsD_C
#=GF AC   PF20905.1
#=GF DE   Antiactivator protein ExsD C-terminal domain
#=GF AU   Eberhardt R;0000-0001-6152-1369
#=GF SE   PDB:3fd9
#=GF GA   27.00 27.00;
#=GF TC   28.40 34.40;
#=GF NC   26.30 25.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   19235906
#=GF RT   Structural evidence suggests that antiactivator ExsD from
#=GF RT   Pseudomonas aeruginosa  is a DNA binding protein.
#=GF RA   Bernhards RC, Jing X, Vogelaar NJ, Robinson H, Schubot FD;
#=GF RL   Protein Sci. 2009;18:503-513.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   The antiactivator protein ExsD represses the transcriptional
#=GF CC   activator ExsA. ExsA activates expression of type III secretion
#=GF CC   system genes. Repression of ExsA by ExsD is relieved by the
#=GF CC   secretion chaperone ExsC [1].
#=GF SQ   10
#=GS T0P214_PHOTE/213-273      AC T0P214.1
#=GS D0Z4V6_PHODD/233-308      AC D0Z4V6.1
#=GS A7MTG4_VIBC1/234-309      AC A7MTG4.1
#=GS U3AKN2_9VIBR/236-310      AC U3AKN2.1
#=GS EXSD_PSEAE/214-274        AC Q9I321.1
#=GS Q87P20_VIBPA/240-315      AC Q87P20.1
#=GS D2TXN2_9GAMM/212-272      AC D2TXN2.1
#=GS E3BLS6_9VIBR/234-309      AC E3BLS6.1
#=GS A0A119A0R8_9PSED/214-274  AC A0A119A0R8.1
#=GS Q7N0V3_PHOLL/213-273      AC Q7N0V3.1
T0P214_PHOTE/213-273                 ..FTGLDALQTDDNLTVFTPV............PEV......LSPCWTWLTALKYDTEAAIHLQQWLCSRALCLPQDSFYW
D0Z4V6_PHODD/233-308                 .k-PTLDKLKGLSQYGETSDKfise...wkvwcGEArvqapeLNDVWDACDHVYSDLNAVAKIWQWFQDMHTVGNVDHYYF
A7MTG4_VIBC1/234-309                 .k-PTLEKLKGLSQYGETSDKfise...wkvwcGEArvqapeLNDVWDACDHVYSDLNAVAKIWQWFQDMHTVGNVDHYYF
U3AKN2_9VIBR/236-310                 pa------LERLKDFNRFQSIneeflsewknwcSEVriqgaeLNEVWNACELAYNDLNALSKVWKWFQEMDTVSAIDQYYF
EXSD_PSEAE/214-274                   ..QRGMATLLASGGLAGFEPI............PEV......LECLWQPLCRLDDDVGAADAVQAWLHERNLCQAQDHFYW
Q87P20_VIBPA/240-315                 ..QPSLSNLKELADYTSTTDMfisd...wktwcSEArlqapdLNEVWDACDVVYNDLNAVAKVWQWFKDMQIVGDVDHYYF
D2TXN2_9GAMM/212-272                 .f-VGIEQMSQQINLTTFMEV............PEN......IRDLWLLLTQLAKGKDVSALIHDWLYVRHLCLENDSFYW
E3BLS6_9VIBR/234-309                 ..QPILESLMSLSEYSKTSDKfvte...wkvwcAEArlqapeLSDVWNACDQVYSDLNAVAKIWQWFQNMQTVGHFDHYYF
A0A119A0R8_9PSED/214-274             .h-QGVAVLLADGKLDGFSPV............PLA......LISLWEPLIKLDEDASAADAVQHWLHERSLCQAQDHFYW
Q7N0V3_PHOLL/213-273                 ..FTGLDALQTGGDLTAFMPV............PEA......LSSCWAWLTTLEHDTEAATHLQKWLCARFLCLPQDNFHW
#=GC seq_cons                        ...suL-sLpshushssFosl............sEA......Ls-lWsshsplhsDlsAsu+lapWhp-hplsts.DHaYa
//