GenomeNet

Database: Pfam
Entry: FimA-like_C
LinkDB: FimA-like_C
Original site: FimA-like_C 
#=GF ID   FimA-like_C
#=GF AC   PF21514.1
#=GF DE   FimA-like major fimbrial subunit protein, C-terminal domain
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF AU   Lazaro Pinto Beatriz;0000-0001-6837-2941
#=GF SE   ECOD:EF20670
#=GF GA   27.00 27.00;
#=GF TC   29.50 28.40;
#=GF NC   26.20 26.20;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Domain
#=GF CL   CL0287
#=GF RC   Paper describing PDB structure 4gpv
#=GF RN   [1]
#=GF RM   27062925
#=GF RT   A Distinct Type of Pilus from the Human Microbiome.
#=GF RA   Xu Q, Shoji M, Shibata S, Naito M, Sato K, Elsliger MA, Grant
#=GF RA   JC, Axelrod HL, Chiu HJ, Farr CL, Jaroszewski L, Knuth MW,
#=GF RA   Deacon AM, Godzik A, Lesley SA, Curtis MA, Nakayama K, Wilson
#=GF RA   IA;
#=GF RL   Cell. 2016;165:690-703.
#=GF DR   SO; 0000417; polypeptide_domain;
#=GF CC   This domain is found at the C-terminal end of FimA-like major
#=GF CC   fimbrial subunit protein from Bacteroides stercoris and similar
#=GF CC   proteins found predominately in bacteroidetes [1]. It is
#=GF CC   normally found associated with Pfam:PF06321.
#=GF SQ   7
#=GS A0A0F5IPH5_9BACT/179-365  AC A0A0F5IPH5.1
#=GS F3PVY0_9BACE/171-346      AC F3PVY0.1
#=GS R5PAV0_9BACT/243-404      AC R5PAV0.1
#=GS A0A0F5JNK3_9BACT/244-389  AC A0A0F5JNK3.1
#=GS A0A2V3PSY3_9BACT/196-361  AC A0A2V3PSY3.1
#=GS A0A380YPG9_BACFN/270-411  AC A0A380YPG9.1
#=GS A0A108T3W3_BACSE/172-352  AC A0A108T3W3.1
A0A0F5IPH5_9BACT/179-365             ........................................................AARIDVVVMDKRRNNTPGVGSVSIADNSVALLFAGADGKFFAESAE.KVTQ..SNFFSG.I.ATA---TT.TG..VAQADVLNDTVEQPFA-TSGEVE..YHFYTFGY.NG...DhdfggglI..RPTILTIA....ST.RTNADG..TE....D..LIYYPVHFNASDA------GMTIEPGKKYTVTLTLTGNVN....N.G..G..GsGGTTTPEDLPKSAEITITVNAATW................................................................
F3PVY0_9BACE/171-346                 ........................................................AAKVTVTVIDQRKGNTEN-GAIYIKNDKIVLLNAGGDAKFFD--TD.KTTQ..TSFFNG.D.ASYPDPAN.SV..VAS--FLSKT------YAESGV-..-HFYAFGN.AS...S.......T..QPTILAIQ....AT.RTEQNG..GT....S..TVYYPIAFSTLDAGAIKPEASTFAPGYSYEITLTLTGNVA....A.G..G..G.NGTVDPEQPLVSGDVTVTIEQAKW................................................................
R5PAV0_9BACT/243-404                 fgtdyikktdrsfaggmswsgmwtgaqptgfvqnteyllnsmpvvdatgnklespg----------------------------------------------.----..------.-.--------.--..-----------------------..-YWYVFTN.NTdvtA.......TtdHPTVLVVV....TKwRSVANS..TTttdlK..TRYFTVYFGGGDQ-------EAIAAGNDYQVTLKLNGSFKptedG.G.dG..G.GGTDDPSKPTVNSAVDITVDVKPW................................................................
A0A0F5JNK3_9BACT/244-389             ........................................gaitrnlitpvfatgl----------------------------------------------.----..------.-.PNSPGGET.TV..TDFSQNITVAPGGFDPSGQIDDI..GYWYVFENpTT...S.......T..TNTTLLIE....YQ.YKENVGdvNM....T..TYYFPVTFSTSDKGA-------IEPGKAYAVTVTFNGSFL....P.GdgG..G.GGVPDPDTEVIPTDVAVTVTPTDW................................................................
A0A2V3PSY3_9BACT/196-361             ..................................................evtray------------------------------LLNVKSESDWFSSASNvSLTQhvNSFFNG.L.GDTFTFSG.SYlpVPPATNSFNSILNMTDVTTGKGFanNYFYVW-E.NS...S.......T..FPTIVVIE....GS.L-----..SG....N..TYYYPIVIN-GDLNGTGPGGSTNGGNKSSTVTRGNIYNVR....AiI..K..G.FGATDPYAPLSPAAIDVTITTATW................................................................
A0A380YPG9_BACFN/270-411             ......................................pvptptplqtdtylvktd----------------------------------------------.----..------.-.--------.--..------LAAS-SAGNQVANVIAD..NPWYLFENpAS...S.......D..KPTGLVVEvvwrSK.DNAEYN..SA....DvlTKYFTIYFGEKKAGSSPANQPYLEPGKTYDISLNLNGDFK....P.G..GngG.GGSDDPSKPSVDANITVTVHPAKW................................................................
A0A108T3W3_BACSE/172-352             ........................................................AAKIELIVKDNRS-NLTGSGSITIADEKVVLLYAGKSGKFFGTTAE.KVAQ..TAFYSG.D.ASYPGFNS.NI..VTTSTALADAVSGFSANTAGVVF..NHFYTFGN.NG...A.......T..QPTILAIQ....SK.KTI-NG..SA....E..TIYYPIQFSTGDA------GYTIEPGKHYTVTLTLRGDVN....A.G..E..G.GGTTDPEQPLVNSSIRITVTAASW................................................................
#=GC seq_cons                        ......................................................................................................................ss....ts.sh..ss....lsss..t....sps.s....aaYsFtN.so...u.......T..pPTlLsIp....up.cs.tsu..os....s..ThYaPlhFusuDt......t.sltPGKsYsVTLsLsGshp....s.G..G..G.GGosDPppPhlsuslslTVssAsW................................................................
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