GenomeNet

Database: Pfam
Entry: Fimbrial_K88
LinkDB: Fimbrial_K88
Original site: Fimbrial_K88 
#=GF ID   Fimbrial_K88
#=GF AC   PF02432.19
#=GF DE   Fimbrial, major and minor subunit
#=GF PI   Fibrimal; 
#=GF AU   Mian N;0000-0003-4284-4749
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_2036 (release 5.4)
#=GF GA   25.00 25.00;
#=GF TC   33.00 31.60;
#=GF NC   24.90 23.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   9393819
#=GF RT   Identification and characterization of a K88- and CS31A-like
#=GF RT   operon of a rabbit enteropathogenic Escherichia coli strain
#=GF RT   which encodes fimbriae involved in the colonization of rabbit
#=GF RT   intestine. 
#=GF RA   Adams LM, Simmons CP, Rezmann L, Strugnell RA, Robins-Browne RM; 
#=GF RL   Infect Immun 1997;65:5222-5230.
#=GF DR   INTERPRO; IPR003467;
#=GF DR   PROSITE; PDOC00202;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Fimbriae (also know as pili) are polar filaments found on the
#=GF CC   bacterial surface, allowing colonisation of the host. This
#=GF CC   family consists of the minor and major fimbrial subunits.
#=GF SQ   3
#=GS B2VI83_ERWT9/29-156      AC B2VI83.1
#=GS A0A090RH49_9VIBR/33-187  AC A0A090RH49.1
#=GS A0A4Z0L1B4_SALET/32-129  AC A0A4Z0L1B4.1
B2VI83_ERWT9/29-156                 g-GEIQFQGFVTDEAPKWTWQVASPDQSWAVD-----TADARHENGQLVFDLHNKGPLPFLEGHLHEVVERGGPGLTPFITFSSGGASLAIVEGNST-----------------------------------------------------------tsqrfraavpvhdpdsgkpvgqlfftlnqgmavstgy
A0A090RH49_9VIBR/33-187             .GATLNFNGTIVDTNPDWAYQLDPSAEALARDWETTQNAGLVQSDGTLVFDFTAKGHIPFVQGYIESAASQGGVGLSPVVTITTSTGEVEVIGPNMPQGGITDVVLDVTEGTGGDQVASLQMQISGVTAGAVMYNGAYYWNEGATGFGTAQTAAAK.....................................
A0A4Z0L1B4_SALET/32-129             g-GEIQFHGLVTDEAPKWTWQVGSPDQTWAVDTAD-----ARTANGQLVFDLRGKGSLPFLEGHLYEVAERGGPGFTPFISFSS------------------------------------------------------------------------ngqpfsvtdggsttaqhfra.................
#=GC seq_cons                       G.GEIQFpGhVTDEAPKWTWQVuSPDQoWAVDhts..sAsARpuNGQLVFDL+uKGsLPFLEGHLaEVAERGGPGLTPFITFSSusupltlltsN.s...........................................................suQ.Fpssssspssspth.s.................
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