#=GF ID Fimbrial_PilY2
#=GF AC PF14481.10
#=GF DE Type 4 fimbrial biogenesis protein PilY2
#=GF AU Jaroszewski L;
#=GF AU Godzik A;0000-0002-2425-852X
#=GF SE Pseudomonas aeruginosa PAO1 gene PA4555, JCSG target SP18988A
#=GF GA 25.00 25.00;
#=GF TC 25.00 33.80;
#=GF NC 24.70 21.50;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP Family
#=GF CL CL0021
#=GF RN [1]
#=GF RM 8899718
#=GF RT Fimbrial biogenesis genes of Pseudomonas aeruginosa: pilW and
#=GF RT pilX increase the similarity of type 4 fimbriae to the GSP
#=GF RT protein-secretion systems and pilY1 encodes a gonococcal PilC
#=GF RT homologue.
#=GF RA Alm RA, Hallinan JP, Watson AA, Mattick JS;
#=GF RL Mol Microbiol. 1996;22:161-173.
#=GF DR INTERPRO; IPR029497;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF CC Members of this family were experimentally shown to be involved
#=GF CC in fimbrial biogenesis, but its exact role appears to be
#=GF CC unknown.
#=GF SQ 9
#=GS G3XD55_PSEAE/1-105 AC G3XD55.1
#=GS A0A553H305_9PSED/1-100 AC A0A553H305.1
#=GS A0A2T5P8E1_9PSED/3-111 AC A0A2T5P8E1.1
#=GS A0A5P9C5W2_9PSED/1-111 AC A0A5P9C5W2.1
#=GS A0A5J6QFT7_9PSED/3-108 AC A0A5J6QFT7.1
#=GS A4VI65_PSEU5/2-107 AC A4VI65.1
#=GS A0A1H2EAB0_9PSED/2-99 AC A0A1H2EAB0.1
#=GS W9T792_9PSED/2-101 AC W9T792.1
#=GS A4BTT8_9GAMM/7-104 AC A4BTT8.1
G3XD55_PSEAE/1-105 ...............MKVLPMLLALAVPGL...CWAEDPQTFEGAGVVFEVQVEKNLVDIDHRLYRLPN....STVRNGM...PSLFQVKPGSVVSYSGTVSQPWSTITDIYIHKQMSEQELAEMIEKEQ..........
A0A553H305_9PSED/1-100 mkrqpgfllaigcgv-------------AL..hMGSALAETFEEVGIVQDVLVEKNIVLVDGKRYKLPN....SLQENGS...PILFQLKPGQVVNFSGTVDKPEPVIESITVN----------------taapvlin..
A0A2T5P8E1_9PSED/3-111 .....mnrkliglmg------------AALl.cSAAAQAQTFEESGVVEKVFSERSLIQVNDRMYTLPNrvteSLSPGAG...PAIFQLRTGTVVNFSGITGGQYPLIDSMAILRQPTPEEEMQLQRE--ln........
A0A5P9C5W2_9PSED/1-111 ........mkkflfi--------FVSVCGLwmaHASAQAQTFEATGAVQDINLAQSKIRIDDRTYLLPNsvteSLLVNAG...PVIYQLQIGTVIAFSGTESGSIAKIESVAILLQPSPEEVQELL----rera......
A0A5J6QFT7_9PSED/3-108 ............nil---LFVVVALSAASF...TVSAQVNTFEDIGAVQSVQLGNNVIVVNDTSYHLPN....TVQVEGA...AAILKLKPGYLVGFSGTLAAPYNRIDSLYLYPESVIEA---------eqnlknsaae
A4VI65_PSEU5/2-107 ...............KSLISSVLFLLV---...AFTANAETFEISGAVQRIELETSLITIDGKRYQLPNrvpeSLVPTGG...PVIYQLRPGSVIAASGSYATPFPKLDSVAILRQPSPEEQIQIQSEMD..........
A0A1H2EAB0_9PSED/2-99 ...........rkpl----AVLLLAAGSALa.gTGVQAVDSFEEVGLIEALDPRQQLVTVDGRTYRLPA....QIQLDGL...PAISRLQSGRLIGFSGVQQRPYPLIESLYLYPTQA------------epq.......
W9T792_9PSED/2-101 ...............NHRFPRLLAIVTMTL..lTGIAHSATFEASGTISDVQLGNNLIVVEKTTYSLPN....KTALNGT...PAILQLQPGYLIGFSGTEASPHSIIDSIYLYPES-------------vrsakqg...
A4BTT8_9GAMM/7-104 ......fllralaag---------LLAWGL..gTAAQEVHTFEDNGVIQQLDPVGEQIIIDGQHYALPT....AVAQQATdqrGAKITLQQGMWVSFYGSVSSHTPQIQGITFLR---------------wsdk......
#=GC seq_cons ..............h........hl.s.uL..hsuuApspTFEtsGsVpclpltpslIhlDs+pYpLPN....olt.sGs...PuIhQLpsGplluFSGohusPashI-Slhlh.p.s.............tt.......
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