#=GF ID Foamy_BEL
#=GF AC PF03274.18
#=GF DE Foamy virus BEL 1/2 protein
#=GF AU Mifsud W;0000-0002-9805-6461
#=GF SE Pfam-B_4337 (release 6.5)
#=GF GA 24.00 24.00;
#=GF TC 28.10 28.50;
#=GF NC 22.60 22.00;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -E 1000 -Z 75585367 --cpu 4 HMM pfamseq
#=GF TP Family
#=GF RN [1]
#=GF RM 11017797
#=GF RT Characterization of the humoral immune response and virus
#=GF RT replication in cats experimentally infected with feline foamy
#=GF RT virus.
#=GF RA Alke A, Schwantes A, Zemba M, Flugel RM, Lochelt M;
#=GF RL Virology 2000;275:170-176.
#=GF RN [2]
#=GF RM 11129637
#=GF RT Human foamy virus Bel 1 transactivator/estrogen receptor fusion
#=GF RT proteins allow inducible transactivation of both human foamy
#=GF RT virus promoters.
#=GF RA Yang P, Flugel RM, Li W, Lochelt M;
#=GF RL Virus Genes 2000;21:209-213.
#=GF DR INTERPRO; IPR004956;
#=GF DR SO; 0100021; polypeptide_conserved_region;
#=GF SQ 14
#=GS BEL2_SFV3L/9-207 AC P27403.2
#=GS BEL1_SFVCP/135-240 AC Q87042.1
#=GS A0A077JF44_9RETR/127-243 AC A0A077JF44.1
#=GS BET_SFVCP/29-300 AC Q87043.2
#=GS A0A077JF44_9RETR/63-134 AC A0A077JF44.1
#=GS Q7SIS3_9RETR/4-134 AC Q7SIS3.1
#=GS K7ZBX6_9RETR/63-295 AC K7ZBX6.1
#=GS BEL1_FOAMV/29-136 AC P14353.2
#=GS BEL1_SFV3L/126-240 AC P27402.1
#=GS K7YKV9_9RETR/127-240 AC K7YKV9.1
#=GS BET_FOAMV/29-301 AC P89873.1
#=GS A0A077JM51_9RETR/62-295 AC A0A077JM51.1
#=GS BEL1_SFVCP/29-136 AC Q87042.1
#=GS BEL1_FOAMV/128-240 AC P14353.2
BEL2_SFV3L/9-207 ..larenls-----------------------------------.--------------------------..........-----NPESGLILLEDTERSHSSLRIGQNAPDGVWPLgNS.P.ILPVVTPWPLCQDHAAPSIWTLLDAYWRGYQDQNLEPPKWLWLCLEDPSGNKYTGTQFLVPPLGLVKIRLYQNLTVVYICQSI--DPWENE..NPTGGRRDPTRR.YGCRIACDPVYCVKIVWE---GNLW------DKKDQPCWLIRLKEGHNHGAKE--------------------------.-------.-----------lsqrdikilge...................................
BEL1_SFVCP/135-240 ........c-----------------------------------.--------------------------..........-------------------------------------.--.-.-----------------------------------------------------------------------------IFCDAVIHDPMPVV..W----------D.SEVEIW--------VKYKPLRGIVGSAVFIMEKHQKNCSLVKPSTSCPEGPKPRRRHDPVLRCDMFEKHHKPRPKRSRK.RSIDHES.CASSGDTVANE..............................................
A0A077JF44_9RETR/127-243 ........s-----------------------------------.--------------------------..........-------------------------------------.--.-.----------------------------------------------------------------RVNKQYFEVEYSCRMCRTVLHEPMPIM..Y----------D.PETELW--------VKPGRLRGPLGSAVYTLKKHYERCLSALPSFEG--TRLPKRRANPSRRYEAFREHTPTRKRRSKEgISTDQQP.STSSGDPVA--l.............................................
BET_SFVCP/29-300 .........ENAGEGDLVIAEEPEENPRRPRRYTKRDVKCVSYH.AYKELEDKHPHHIKLQDWIPKPEEMV..........AQKVQNQDVGTILSFDVTCLKSITSLGRNDPGNDPSI.MS.H.VLPVVTPWPMSQDHYAPTLFGLLDRYYKGYLENPATFQTWKFTCQEDPSGKRYMGTQFWVPPLGQVNIQFYKNYQIVTCCQAL--DPFANI..FHGTEEEMYDID.SGPDVWCTPSLCFKVIYE---GAIG------QKQEQKSWL------CRLGYGHRMGANDYRRVDLYAMKQ---------.-------.-----------gkknpygdkgdaalq...............................
A0A077JF44_9RETR/63-134 .......st-------------------------------VTWHfGYKDKEDQQP-EIKMRDWVPDPSKM-..........---------------SKSTCMRLILLGLYQACKAQEI.IK.M.--DFDVHWEQSR-------------------------------------------------------------------------------..------------.-------------------------------------------------------------------------------.-------.-----------vnkqyf........................................
Q7SIS3_9RETR/4-134 .......sp-----------------------------------.--------------------------..........-------------------------------------.--.-.-------------------------------------QPWQFQCLVDKYGKKCIMTYFWMPPLGQVTIRLYNNLTVITICQGL--DPFVNL..ND-CGSNLDESDcSEPDVFCCGPLCYKLCYE------G------------------------------------------------------.-------.-----------halsfdklrcwllhlkgghpdgasnftkndmrvlqlgkvnpygekg
K7ZBX6_9RETR/63-295 tyqfgfmdk-----------------------------------.-----EEQDP-DLKMRDWVPEPDKMI..........LENLSSPELGLILSDDIEKCKSSLRLGPNAPDGVWPL.ANgP.ILPVITPWPLCQDHAAPSVRTILEAYWKGYKEQDLEPPKWLWLCQEDLSGNKCTMTQFLVPPLGQVTIRLFKNATVVNICQSV--DPWENEnpMGGRAGPVYR--.YECRIPCDPAYCFKVIWE---GNIW------DKPDQACWLI------HLKEGHKFGANELSQSD---------------.-------.-----------iklleqsrpypyg.................................
BEL1_FOAMV/29-136 .........ENAGEGELTIAEEPEENPRRPRRYTKREVKCVSYH.AYKEIEDKHPQHIKLQDWIPTPEEM-..........---------------SKSLCKRLILCGLYSAEKASEI.LR.M.--PFTVSWEQSD-------------------TDPDCFIV-SYTC-----------------------------------------------..------------.-------------------------------------------------------------------------------.-------.-----------i.............................................
BEL1_SFV3L/126-240 ....edsqy-----------------------------------.--------------------------..........-------------------------------------.--.-.----------------------------------------------------------------------FEIEYHCKMCMTVIHEPMPVS..Y----------D.KKTGLW--------IKMGPLRGDIGSVVHTCRRHYERCMSALPSSG--EPLKPRVRANPVRRYREKSLIVADRPKRSRW.GVAPREQpNTSSGDAM---al............................................
K7YKV9_9RETR/127-240 .dkdffeve-----------------------------------.--------------------------..........-------------------------------------.--.-.--------------------------------------------------------------------------YHCKMCMTVLHEPMPVK..W----------D.HENGLW--------LKMGPLRGDLGSVVHTLRRHYNRCLSTLPSTG--EPVKPRTRANPVRRYREMQVVVEARPKRSRW.GMAPGER.AHTSSDHAM--al............................................
BET_FOAMV/29-301 .........ENAGEGELTIAEEPEENPRRPRRYTKREVKCVSYH.AYKEIEDKHPQHIKLQDWIPTPEEMI..........AQKVQNQDLGTILSFDVTCLKSITSLGRNDPGDDPSI.MS.H.VLPVVTPWPMSQDHYAPTLFGILDRYYQGYLKSPATYQTWKFTCQVDPSGKRFMETQFWVPPLGQVNIQFYKNYQILTCCQAV--DPFANI..FHGTDEEMFDID.SGPDVWCSPSLCFKVIYE---GAMG------QKQEQKTWL------CRLGHGHRMGACDYRKVDLYAMR----------.-------.-----------qgkenpygdrgdaalqy.............................
A0A077JM51_9RETR/62-295 ......pst-------------------------------VTWHfGYKDKEDQQP-EIKMRDWVPDPSKMSkstcmrlilsSKELGSQSVALILAEDMKHSESILQLGNGAPRKGFPL.TS.SpLLPVVTPWPLSQDHVAPTLYSLLVAYYKSFQNQKLEPPKWLWQCLEDPSGRKCMVTQFLVPPLGQVMISCYRNLTSIIICQAV--DPWENN..N--EIDWKKDPM.ARPRIRCDHALCFKVVYE---GTP------WRPHDQKCWFIRLTEGHKH------------------------------.-------.-----------gmeelssgdwk...................................
BEL1_SFVCP/29-136 .........ENAGEGDLVIAEEPEENPRRPRRYTKRDVKCVSYH.AYKELEDKHPHHIKLQDWIPKPEEM-..........---------------SKSICKRLILCGLYSGEKAREI.LK.K.--PFTVSWEQSE-------------------TNPDCFIV-SYTC-----------------------------------------------..------------.-------------------------------------------------------------------------------.-------.-----------i.............................................
BEL1_FOAMV/128-240 ...cfivsy-----------------------------------.--------------------------..........-------------------------------------.--.-.---------------------------------------------------------------------------TCIFCDAVIHDPMPIR..W----------D.PEVGIW--------VKYKPLRGIVGSAVFIMHKHQRNCSLVKPSTSCSEGPKPRPRHDPVLRCDMFEKHHKPRQKRPRR.RSIDNES.CASSSDTMANE..............................................
#=GC seq_cons ........................................................................................................................................................................................................hhhCpsl..-Ph.s..............c..tstlh........lhht...G.hh......p+p.pts.............h...............................................h.............................................
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