#=GF ID HTH_7
#=GF AC PF02796.19
#=GF DE Helix-turn-helix domain of resolvase
#=GF AU Finn RD;0000-0001-8626-2148
#=GF AU Griffiths-Jones SR;0000-0001-6043-807X
#=GF SE Prosite
#=GF GA 23.80 23.80;
#=GF TC 23.80 23.80;
#=GF NC 23.70 23.70;
#=GF BM hmmbuild HMM.ann SEED.ann
#=GF SM hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP Domain
#=GF WK Helix-turn-helix
#=GF CL CL0123
#=GF RN [1]
#=GF RM 7628011
#=GF RT Crystal structure of the site-specific recombinase gamma delta
#=GF RT resolvase complexed with a 34 bp cleavage site.
#=GF RA Yang W, Steitz TA;
#=GF RL Cell 1995;82:193-207.
#=GF DR INTERPRO; IPR006120;
#=GF DR PROSITE; PDOC00334;
#=GF DR SCOP; 1hcr; fa;
#=GF DR SO; 0000417; polypeptide_domain;
#=GF SQ 4907
#=GS A0A7G3V9R6_9CAUD/10-47 AC A0A7G3V9R6.1
#=GS A0A1C5G7E2_MICEH/1-38 AC A0A1C5G7E2.1
#=GS A0A4R8XZL4_9MICO/32-75 AC A0A4R8XZL4.1
#=GS U1JE10_9GAMM/139-182 AC U1JE10.1
#=GS A0A318TET1_9BRAD/140-180 AC A0A318TET1.1
#=GS A0A3N4V7H3_9BURK/141-185 AC A0A3N4V7H3.1
#=GS A0A2T0RNM5_9BACT/138-186 AC A0A2T0RNM5.1
#=GS A0A1I4ME88_9GAMM/164-205 AC A0A1I4ME88.1
#=GS A0A560W7R5_9MICO/149-194 AC A0A560W7R5.1
#=GS A0A543NIM1_9ACTN/138-189 AC A0A543NIM1.1
#=GS A0A0J7XU60_9SPHN/146-186 AC A0A0J7XU60.1
#=GS A6DQA5_9BACT/147-187 AC A6DQA5.1
#=GS A0A0N1C2P4_9SPHN/138-178 AC A0A0N1C2P4.1
#=GS A0A1L8W8Y9_9ENTE/147-199 AC A0A1L8W8Y9.1
#=GS A0A0P0NEA9_9SPHI/5-45 AC A0A0P0NEA9.1
#=GS C8XEZ2_NAKMY/145-189 AC C8XEZ2.1
#=GS K8ETK0_CARML/138-181 AC K8ETK0.1
#=GS V6JFC2_STRRC/2-42 AC V6JFC2.1
#=GS A0A374BNK9_9BACT/12-54 AC A0A374BNK9.1
#=GS A0A290ZRY8_9RHOO/141-185 AC A0A290ZRY8.1
#=GS B1YGK6_EXIS2/137-180 AC B1YGK6.1
#=GS A0A286EPR6_9ACTN/140-185 AC A0A286EPR6.1
#=GS A0A0M2VT33_9BACL/137-181 AC A0A0M2VT33.1
#=GS K0YVK5_9ACTO/139-182 AC K0YVK5.1
#=GS C8XFJ0_NAKMY/144-188 AC C8XFJ0.1
#=GS A0A430BJ51_9SPHN/140-181 AC A0A430BJ51.1
#=GS A0A1L4A0C1_9SPHN/139-179 AC A0A1L4A0C1.1
#=GS Q74CG3_GEOSL/139-182 AC Q74CG3.1
#=GS A0A517Z9Q3_9PLAN/6-43 AC A0A517Z9Q3.1
#=GS A0A0J1HZT8_NIACI/142-189 AC A0A0J1HZT8.1
#=GS A0A1X1R836_MYCFA/145-187 AC A0A1X1R836.1
#=GS A0A1D2W9Y9_9EURY/45-86 AC A0A1D2W9Y9.1
#=GS A0A0U3EGN1_9HYPH/139-183 AC A0A0U3EGN1.1
#=GS A0A1S1Y5C6_9GAMM/160-201 AC A0A1S1Y5C6.1
#=GS A0A1H1G722_9HYPH/142-184 AC A0A1H1G722.1
#=GS A0A841JBC3_9SPHN/140-179 AC A0A841JBC3.1
#=GS A0A2S8RWB5_9RHOB/144-184 AC A0A2S8RWB5.1
#=GS A0A060QH55_9PROT/141-185 AC A0A060QH55.1
#=GS A0A1C4ZZF7_MICEC/194-238 AC A0A1C4ZZF7.1
#=GS I4EKH9_9CHLR/138-183 AC I4EKH9.1
#=GS A0A374DBJ8_9FIRM/47-93 AC A0A374DBJ8.1
#=GS A0A2A3YMF4_9MICO/146-189 AC A0A2A3YMF4.1
#=GS A3X2Y7_9BRAD/6-39 AC A3X2Y7.1
#=GS W9G2Q2_9MICO/2-41 AC W9G2Q2.1
#=GS N2ITZ7_9PSED/153-191 AC N2ITZ7.1
#=GS A0A6N9HC17_9MICO/141-185 AC A0A6N9HC17.1
#=GS A0A3G9M8Y5_RHOOP/140-182 AC A0A3G9M8Y5.1
#=GS F2NGN7_DESAR/1-38 AC F2NGN7.1
#=GS A0A1G8ELT0_9RHOO/141-185 AC A0A1G8ELT0.1
#=GS A0A6I6SAJ4_9ACTN/58-103 AC A0A6I6SAJ4.1
#=GS A0A420E7Q7_9ALTE/137-179 AC A0A420E7Q7.1
#=GS A0A6G9IFC8_9GAMM/138-182 AC A0A6G9IFC8.1
#=GS A0A024QGA0_9BACI/55-102 AC A0A024QGA0.1
#=GS A0A1S2M9N7_9BACI/1-28 AC A0A1S2M9N7.1
#=GS A0A8J3I7V6_9CHLR/138-183 AC A0A8J3I7V6.1
#=GS A0A2A3Z289_9MICO/154-196 AC A0A2A3Z289.1
#=GS A0A0B2BZC5_9SPHN/144-189 AC A0A0B2BZC5.1
#=GS A0A021XGA6_9HYPH/148-190 AC A0A021XGA6.1
#=GS A0A0Q6LZR5_9HYPH/155-199 AC A0A0Q6LZR5.1
#=GS A0A2H3KHB4_9CHLR/328-370 AC A0A2H3KHB4.1
#=GS A0A0A0HIF5_9RHOB/183-223 AC A0A0A0HIF5.1
#=GS A0A0B6TV94_9CORY/1-37 AC A0A0B6TV94.1
#=GS Q2A092_9CAUD/143-184 AC Q2A092.1
#=GS A0A0P7I5Z1_9RHOB/140-186 AC A0A0P7I5Z1.1
#=GS A0A553H3U5_9PSED/140-181 AC A0A553H3U5.1
#=GS A0A318M6R0_9PSEU/2-40 AC A0A318M6R0.1
#=GS A0A3M9M5F4_9MICO/53-96 AC A0A3M9M5F4.1
#=GS A0A369VTM3_9SPHN/164-205 AC A0A369VTM3.1
#=GS Q5LSP7_RUEPO/17-59 AC Q5LSP7.1
#=GS A0A843Z0J9_9BURK/147-191 AC A0A843Z0J9.1
#=GS A0A502BGX5_9HYPH/139-182 AC A0A502BGX5.1
#=GS A0A0C1MXD4_9RICK/35-80 AC A0A0C1MXD4.1
#=GS W5Y2L9_9CORY/1-41 AC W5Y2L9.1
#=GS A0A5J6F7A6_9ACTN/168-211 AC A0A5J6F7A6.1
#=GS A0A0C1QI22_9RICK/106-151 AC A0A0C1QI22.1
#=GS A0A2K8SRK8_9NOSO/34-77 AC A0A2K8SRK8.1
#=GS A0A086XUG4_9RHOB/147-188 AC A0A086XUG4.1
#=GS A0A369L8I8_9ACTN/137-182 AC A0A369L8I8.1
#=GS A0A1I4YS17_9FLAO/3-43 AC A0A1I4YS17.1
#=GS A0A1I0BND5_9GAMM/139-174 AC A0A1I0BND5.1
#=GS A0A150L5D0_9BACI/142-189 AC A0A150L5D0.1
#=GS A0A1B3NDZ9_9HYPH/155-198 AC A0A1B3NDZ9.1
#=GS A0A547PJB8_9RHOB/3-41 AC A0A547PJB8.1
#=GS B4WV35_SYNS7/69-112 AC B4WV35.1
#=GS A0A853IKX7_9GAMM/143-187 AC A0A853IKX7.1
#=GS A8H6A0_SHEPA/149-191 AC A8H6A0.1
#=GS A0A2Z4WAE7_9CLOT/317-359 AC A0A2Z4WAE7.1
#=GS A0A086YAP3_9RHOB/156-200 AC A0A086YAP3.1
#=GS A0R850_PELPD/141-185 AC A0R850.1
#=GS R7DD89_9BACT/169-207 AC R7DD89.1
#=GS A0A6I1EZI0_9BACI/142-189 AC A0A6I1EZI0.1
#=GS A0A1B3MTY8_9SPHN/140-180 AC A0A1B3MTY8.1
#=GS A0A4Y8I7Z5_9BACT/138-182 AC A0A4Y8I7Z5.1
#=GS A0A1C9WQZ9_9MICC/41-84 AC A0A1C9WQZ9.1
#=GS A0A4P6UAQ8_9NOCA/157-201 AC A0A4P6UAQ8.1
#=GS A0A0J1HXZ0_NIACI/136-179 AC A0A0J1HXZ0.1
#=GS A0A6G7YPL8_9SPHN/141-184 AC A0A6G7YPL8.1
#=GS A0A161LZ36_9ACTN/166-210 AC A0A161LZ36.1
#=GS A0A1C5CQA0_9ACTN/60-106 AC A0A1C5CQA0.1
#=GS A0A4V2G6I4_9ACTN/141-184 AC A0A4V2G6I4.1
#=GS A0A285R2M5_9SPHN/139-183 AC A0A285R2M5.1
#=GS A0A5N0VF22_9PSEU/1-42 AC A0A5N0VF22.1
#=GS A0A0Q5LJ14_9MICO/141-184 AC A0A0Q5LJ14.1
#=GS A0A0W0TH72_9GAMM/140-183 AC A0A0W0TH72.1
#=GS A0A7G1H1M4_9BACT/1-41 AC A0A7G1H1M4.1
#=GS A0A5Q3QAS1_9PSEU/159-204 AC A0A5Q3QAS1.1
#=GS W4QLA7_9BACI/5-41 AC W4QLA7.1
#=GS A0A6I0FHC1_9CORY/33-74 AC A0A6I0FHC1.1
#=GS A0A512PDU4_9CELL/154-199 AC A0A512PDU4.1
#=GS A0A4Z0R128_9FIRM/147-190 AC A0A4Z0R128.1
#=GS A0A373NNJ1_9FIRM/46-85 AC A0A373NNJ1.1
#=GS A0A1C9WXE9_9MICC/147-188 AC A0A1C9WXE9.1
#=GS M9RPH7_9RHOB/117-159 AC M9RPH7.1
#=GS A0A515KDU6_9BRAD/140-181 AC A0A515KDU6.1
#=GS A0A286S1P7_9CAUD/138-182 AC A0A286S1P7.1
#=GS A0A366H2C9_9BURK/140-181 AC A0A366H2C9.1
#=GS A0A4R5W7T9_9BURK/144-188 AC A0A4R5W7T9.1
#=GS A0A3N0C017_9MICC/147-188 AC A0A3N0C017.1
#=GS E1VKN7_9GAMM/141-184 AC E1VKN7.1
#=GS A0A1G9GP04_9MICO/144-188 AC A0A1G9GP04.1
#=GS T0J3R9_9SPHN/151-190 AC T0J3R9.1
#=GS F4B968_ACIHW/94-127 AC F4B968.1
#=GS A0A0L7SY94_9GAMM/187-228 AC A0A0L7SY94.1
#=GS A0A506YAD3_9MICO/144-187 AC A0A506YAD3.1
#=GS A0A7W6FPG4_9SPHN/138-176 AC A0A7W6FPG4.1
#=GS A0A1L8PLR0_9LACT/147-199 AC A0A1L8PLR0.1
#=GS A0A0A8VE83_YERRU/138-182 AC A0A0A8VE83.1
#=GS A0A1G5UQ30_9SPHN/139-183 AC A0A1G5UQ30.1
#=GS D3CX62_9ACTN/140-183 AC D3CX62.1
#=GS A0A1W1W7D1_SULTA/138-182 AC A0A1W1W7D1.1
#=GS A0A161SKN4_9MICO/149-192 AC A0A161SKN4.1
#=GS A0A7W6EAR6_9RHOB/147-187 AC A0A7W6EAR6.1
#=GS A0A4Q2U200_9HYPH/155-198 AC A0A4Q2U200.1
#=GS A0A2T0M574_9ACTN/131-182 AC A0A2T0M574.1
#=GS A0A8E1C3A9_9SPHN/171-213 AC A0A8E1C3A9.1
#=GS G9ER80_9GAMM/138-182 AC G9ER80.1
#=GS A0A6N9HB59_9MICO/143-186 AC A0A6N9HB59.1
#=GS A0A0F7JUE0_9SPHN/138-182 AC A0A0F7JUE0.1
#=GS A0A7I8F237_9CHLR/3-40 AC A0A7I8F237.1
#=GS A0A1H0GFK7_9BACI/119-149 AC A0A1H0GFK7.1
#=GS A1VX61_POLNA/140-181 AC A1VX61.1
#=GS A0A3S2YT02_9HYPH/147-191 AC A0A3S2YT02.1
#=GS A0A1I3SRX0_9RHOB/147-188 AC A0A1I3SRX0.1
#=GS R7AUV5_9FIRM/18-55 AC R7AUV5.1
#=GS A0A291M4Y4_9RHOB/144-188 AC A0A291M4Y4.1
#=GS A0A257J5T6_9PROT/139-184 AC A0A257J5T6.1
#=GS J6UED3_9RHOB/39-81 AC J6UED3.1
#=GS A0A3E0GWK2_9PSEU/141-186 AC A0A3E0GWK2.1
#=GS A0A511AYM1_9PROT/140-182 AC A0A511AYM1.1
#=GS A0A841J599_9SPHN/87-126 AC A0A841J599.1
#=GS A0A7H1NS79_9PROT/28-54 AC A0A7H1NS79.1
#=GS A0A0Q3S110_9BACI/137-181 AC A0A0Q3S110.1
#=GS A0A5B7WWZ8_9MICC/197-241 AC A0A5B7WWZ8.1
#=GS A0A4P6JJP6_9CHLR/143-187 AC A0A4P6JJP6.1
#=GS B9ECB9_MACCJ/146-191 AC B9ECB9.1
#=GS A0A1W9Q8K6_9DELT/5-44 AC A0A1W9Q8K6.1
#=GS A0A291GGJ3_9RHOB/139-182 AC A0A291GGJ3.1
#=GS A0A1M7JUC0_9RHOB/139-184 AC A0A1M7JUC0.1
#=GS A0A347WNS3_9LACT/3-37 AC A0A347WNS3.1
#=GS A0A2J6NHE7_9STAP/141-184 AC A0A2J6NHE7.1
#=GS A0A068Z357_9BURK/138-182 AC A0A068Z357.1
#=GS A0A1I4UK79_9PSED/138-182 AC A0A1I4UK79.1
#=GS H4F844_9HYPH/122-166 AC H4F844.1
#=GS A0A8J3J3U5_9CHLR/65-111 AC A0A8J3J3U5.1
#=GS A0A5N7MR23_9HYPH/139-183 AC A0A5N7MR23.1
#=GS A0A0D6T805_9RHOB/138-183 AC A0A0D6T805.1
#=GS A0A7I8EIU2_9CHLR/154-195 AC A0A7I8EIU2.1
#=GS A0A3P5WBF2_9RHOB/138-183 AC A0A3P5WBF2.1
#=GS A0A7Y0KHF2_9PSEU/161-206 AC A0A7Y0KHF2.1
#=GS A4F6U0_SACEN/1-39 AC A4F6U0.1
#=GS A0A238ZTP7_9RHOB/4-39 AC A0A238ZTP7.1
#=GS T0GA60_9SPHN/141-185 AC T0GA60.1
#=GS A0A516GF27_9MICO/139-181 AC A0A516GF27.1
#=GS A0A2R8AA65_9RHOB/141-184 AC A0A2R8AA65.1
#=GS A0A177NTU1_9GAMM/147-190 AC A0A177NTU1.1
#=GS U7MMY6_9CORY/139-183 AC U7MMY6.1
#=GS A0A1B0VBM1_9CAUD/138-182 AC A0A1B0VBM1.1
#=GS A0A2V1NZ85_9RHOB/139-180 AC A0A2V1NZ85.1
#=GS A0A6H9YZL7_9ACTN/9-54 AC A0A6H9YZL7.1
#=GS A0A839QM60_9MICC/115-160 AC A0A839QM60.1
#=GS A0A0F5P6S6_9SPHN/139-179 AC A0A0F5P6S6.1
#=GS C4M589_ENTH1/54-96 AC C4M589.1
#=GS A0A1H0EUT9_9BACI/137-180 AC A0A1H0EUT9.1
#=GS A0A2K9F2K3_9RHOB/138-179 AC A0A2K9F2K3.1
#=GS A0A0P0DN37_9MICO/2-41 AC A0A0P0DN37.1
#=GS A0A7X2ZDP1_9BACL/11-44 AC A0A7X2ZDP1.1
#=GS A0A1Q2CV58_9ACTN/141-185 AC A0A1Q2CV58.1
#=GS I3YFL2_THIV6/159-200 AC I3YFL2.1
#=GS A0A7W6BJS6_9SPHN/140-180 AC A0A7W6BJS6.1
#=GS A0A0W1QGT0_9SPHN/138-183 AC A0A0W1QGT0.1
#=GS A0A1G7X6M7_9MICO/1-41 AC A0A1G7X6M7.1
#=GS A0A0P0SMB1_9PSEU/142-192 AC A0A0P0SMB1.1
#=GS A0JS50_ARTS2/144-187 AC A0JS50.1
#=GS A0A136PND1_9ACTN/1-42 AC A0A136PND1.1
#=GS A0A439F555_9BURK/147-191 AC A0A439F555.1
#=GS A0A0Q4L4G7_9SPHN/159-200 AC A0A0Q4L4G7.1
#=GS A0A2T7THJ1_9MICC/144-188 AC A0A2T7THJ1.1
#=GS A0A161SS92_9MICO/141-185 AC A0A161SS92.1
#=GS A0A3A9E849_9BACT/140-179 AC A0A3A9E849.1
#=GS A0A075LG67_9BACI/130-173 AC A0A075LG67.1
#=GS A0A0Q4Y7M7_9BURK/147-187 AC A0A0Q4Y7M7.1
#=GS A0A7C9QVX0_9PROT/141-182 AC A0A7C9QVX0.1
#=GS A0A514BXX5_9CAUL/150-192 AC A0A514BXX5.1
#=GS A0A1G9NBD4_9RHOB/146-186 AC A0A1G9NBD4.1
#=GS A0A1H6EAW7_9ACTN/168-213 AC A0A1H6EAW7.1
#=GS A0A1I5V7H5_9BACI/134-177 AC A0A1I5V7H5.1
#=GS A0A2D3WM73_9PROT/132-181 AC A0A2D3WM73.1
#=GS A0A7T8HLM3_CALRO/3-40 AC A0A7T8HLM3.1
#=GS A0A0X8D060_9BACL/9-41 AC A0A0X8D060.1
#=GS PINE_ECOLI/138-182 AC P03014.2
#=GS A0A2S2C715_9NOCA/1-27 AC A0A2S2C715.1
#=GS A0A085AC53_9ENTR/138-182 AC A0A085AC53.1
#=GS A0A8J7GGJ4_9ACTN/400-445 AC A0A8J7GGJ4.1
#=GS A0A4Q4IGU3_9BACL/142-189 AC A0A4Q4IGU3.1
#=GS A0A0D6T842_9RHOB/144-188 AC A0A0D6T842.1
#=GS A0A257HH67_9HYPH/139-180 AC A0A257HH67.1
#=GS A0A0A3I1H3_9BACL/135-179 AC A0A0A3I1H3.1
#=GS A0A517NAU8_9BACT/154-198 AC A0A517NAU8.1
#=GS A0A1L8W8D6_9ENTE/140-184 AC A0A1L8W8D6.1
#=GS A0A7W9LFG7_9ACTN/140-184 AC A0A7W9LFG7.1
#=GS A0A2T7THF2_9MICC/140-184 AC A0A2T7THF2.1
#=GS A0A8J3RUL4_9ACTN/190-232 AC A0A8J3RUL4.1
#=GS A0A0J6Z2A8_MYCCU/113-157 AC A0A0J6Z2A8.1
#=GS A0A517TWJ5_9BACT/4-44 AC A0A517TWJ5.1
#=GS CIN_BPP1/138-182 AC P10311.1
#=GS A0A498QLM0_9MYCO/1-38 AC A0A498QLM0.1
#=GS A0A5S9IRL7_9BACT/138-186 AC A0A5S9IRL7.1
#=GS A0A2A4KPQ3_9ACTN/232-276 AC A0A2A4KPQ3.1
#=GS A0A387BQP1_9MICO/140-182 AC A0A387BQP1.1
#=GS A0A4R6RE20_9HYPH/147-187 AC A0A4R6RE20.1
#=GS A0A0M0G1N9_SPOGL/139-182 AC A0A0M0G1N9.1
#=GS A0A0Q6KKS9_9SPHN/144-184 AC A0A0Q6KKS9.1
#=GS A0A4V1CET4_9CORY/1-38 AC A0A4V1CET4.1
#=GS E6LIT0_ENTI1/51-97 AC E6LIT0.1
#=GS A0A2C8FEK9_9DELT/144-187 AC A0A2C8FEK9.1
#=GS L0EIP8_THECK/3-36 AC L0EIP8.1
#=GS A0A285LZF7_9HYPH/141-181 AC A0A285LZF7.1
#=GS F0KPL3_ACICP/160-204 AC F0KPL3.1
#=GS A0A0M0GR88_9BACI/137-180 AC A0A0M0GR88.1
#=GS A0A2S1PEM0_9CAUD/138-182 AC A0A2S1PEM0.1
#=GS E2CSD0_9HYPH/171-215 AC E2CSD0.1
#=GS A0A563DSC0_9MICO/2-41 AC A0A563DSC0.1
#=GS A0A1S1MYQ9_9GAMM/139-181 AC A0A1S1MYQ9.1
#=GS A0A844ZC68_9SPHN/141-181 AC A0A844ZC68.1
#=GS A0A0Q4BZG3_9SPHN/136-180 AC A0A0Q4BZG3.1
#=GS R5DCV5_9FIRM/2-39 AC R5DCV5.1
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