#=GF ID   Halo_GVPC
#=GF AC   PF05465.17
#=GF DE   Halobacterial gas vesicle protein C (GVPC) repeat
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF AU   Bateman A;0000-0002-6982-4660
#=GF SE   Pfam-B_17013 (release 8.0)
#=GF GA   22.40 22.40;
#=GF TC   22.40 22.40;
#=GF NC   22.10 21.40;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -Z 75585367 -E 1000 HMM pfamseq
#=GF TP   Repeat
#=GF RN   [1]
#=GF RM   1404376
#=GF RT   Three different but related gene clusters encoding gas vesicles
#=GF RT   in halophilic archaea. 
#=GF RA   Englert C, Kruger K, Offner S, Pfeifer F; 
#=GF RL   J Mol Biol 1992;227:586-592.
#=GF RN   [2]
#=GF RM   8763925
#=GF RT   Transcript analysis of the c-vac region and differential
#=GF RT   synthesis of the two regulatory gas vesicle proteins GvpD and
#=GF RT   GvpE in Halobacterium salinarium PHH4. 
#=GF RA   Kruger K, Pfeifer F; 
#=GF RL   J Bacteriol 1996;178:4012-4019.
#=GF DR   INTERPRO; IPR008639;
#=GF DR   SO; 0001068; polypeptide_repeat;
#=GF CC   This family consists of Halobacterium gas vesicle protein C
#=GF CC   sequences which are thought to confer stability to the gas
#=GF CC   vesicle membranes [1,2].
#=GF SQ   51
#=GS E4NUS1_HALBP/111-142      AC E4NUS1.1
#=GS M1Y0G8_NATM8/214-245      AC M1Y0G8.1
#=GS GVPC1_HALSA/112-143       AC P24574.1
#=GS U1PA83_9EURY/112-141      AC U1PA83.1
#=GS Q18JA2_HALWD/3-34         AC Q18JA2.1
#=GS A0A518S828_9EURY/74-105   AC A0A518S828.1
#=GS GVPC2_HALSA/137-167       AC Q9HHT0.1
#=GS A0A554NBM7_9EURY/112-143  AC A0A554NBM7.1
#=GS E4NUS1_HALBP/3-34         AC E4NUS1.1
#=GS U1PA83_9EURY/3-34         AC U1PA83.1
#=GS E4NUS1_HALBP/149-180      AC E4NUS1.1
#=GS GVPC1_HALSA/42-73         AC P24574.1
#=GS GVPC1_HALSA/182-212       AC P24574.1
#=GS A0A554NBM7_9EURY/182-213  AC A0A554NBM7.1
#=GS Q18JA2_HALWD/181-211      AC Q18JA2.1
#=GS A0A518S828_9EURY/3-34     AC A0A518S828.1
#=GS E4NUS1_HALBP/73-104       AC E4NUS1.1
#=GS A0A238YGD8_HALVU/64-94    AC A0A238YGD8.1
#=GS A0A518S828_9EURY/112-143  AC A0A518S828.1
#=GS U1QHG7_9EURY/3-34         AC U1QHG7.1
#=GS M1Y0G8_NATM8/111-142      AC M1Y0G8.1
#=GS GVPC1_HALSA/150-181       AC P24574.1
#=GS A0A554NBM7_9EURY/150-181  AC A0A554NBM7.1
#=GS A0A238YGD8_HALVU/162-192  AC A0A238YGD8.1
#=GS GVPC1_HALSA/74-105        AC P24574.1
#=GS A0A238YGD8_HALVU/257-282  AC A0A238YGD8.1
#=GS A0A554NBM7_9EURY/3-34     AC A0A554NBM7.1
#=GS V4ZT84_9ARCH/81-111       AC V4ZT84.1
#=GS A0A554NBM7_9EURY/42-73    AC A0A554NBM7.1
#=GS A0A518S828_9EURY/182-213  AC A0A518S828.1
#=GS A0A238YGD8_HALVU/285-315  AC A0A238YGD8.1
#=GS U1QHG7_9EURY/112-141      AC U1QHG7.1
#=GS GVPC1_HALSA/215-246       AC P24574.1
#=GS A0A554NBM7_9EURY/74-105   AC A0A554NBM7.1
#=GS U1PA83_9EURY/41-72        AC U1PA83.1
#=GS A0A518S828_9EURY/150-181  AC A0A518S828.1
#=GS GVPC2_HALSA/170-200       AC Q9HHT0.1
#=GS E4NUS1_HALBP/207-238      AC E4NUS1.1
#=GS M1Y0G8_NATM8/181-211      AC M1Y0G8.1
#=GS V4ZT84_9ARCH/3-34         AC V4ZT84.1
#=GS GVPC1_HALSA/3-34          AC P24574.1
#=GS A0A554NBM7_9EURY/215-246  AC A0A554NBM7.1
#=GS GVPC2_HALSA/104-134       AC Q9HHT0.1
#=GS Q18JA2_HALWD/111-142      AC Q18JA2.1
#=GS Q18JA2_HALWD/149-180      AC Q18JA2.1
#=GS A0A518S828_9EURY/215-246  AC A0A518S828.1
#=GS E4NUS1_HALBP/41-72        AC E4NUS1.1
#=GS A0A518S828_9EURY/42-73    AC A0A518S828.1
#=GS GVPC2_HALSA/35-64         AC Q9HHT0.1
#=GS A0A238YGD8_HALVU/97-127   AC A0A238YGD8.1
#=GS U1QHG7_9EURY/149-172      AC U1QHG7.1
E4NUS1_HALBP/111-142                 ..VSDLLAAIEDLRAEMDTTHEAFDAYTNEFVTD...
M1Y0G8_NATM8/214-245                 ..VQALLDAVVAFRAEIDNVSEEFKTTEDTFATF...
GVPC1_HALSA/112-143                  ..IGNLLAAIEALRTEMNSTHGAFEAYADDFAAD...
U1PA83_9EURY/112-141                 ge---LQAAVDALTAEMKATTESFEAYADEFTA-...
Q18JA2_HALWD/3-34                    ..VRKKRDEIEATSEEFRTTQREFAGYADDFAAD...
A0A518S828_9EURY/74-105              ..VDQLRADIDAQRDVIRELQDAFEAYADTFATD...
GVPC2_HALSA/137-167                  ..VGALHADAAETAASFTAKQEGFEAYRHDVHE-...
A0A554NBM7_9EURY/112-143             ..IDDLLVAVESLRTEMDTTQETFGAYADDFAAD...
E4NUS1_HALBP/3-34                    ..VRDKREKMTATREEFADAQQEFAAYAADFAAD...
U1PA83_9EURY/3-34                    ..VNKKREEMARAREQFTEKQAEFTSYAARFDAD...
E4NUS1_HALBP/149-180                 ..VSDLLAAIEELQLEFGAVQAEFDDYTDDFDAD...
GVPC1_HALSA/42-73                    ..VSDLVDAITDFQAEMTNTTDAFHTYGDEFAAE...
GVPC1_HALSA/182-212                  ..IDQLHAAIADQHDSFDATADAFAEYRDEFY--r..
A0A554NBM7_9EURY/182-213             ..INQFHTTIADQRDSFDATTDAFVEYREEFYG-e..
Q18JA2_HALWD/181-211                 ..VDAIHADVAAEKEAFEAVTDAFESYQSEFHT-...
A0A518S828_9EURY/3-34                ..VTDKRDEMRTAREEFAEAQSEFESYADEFAAD...
E4NUS1_HALBP/73-104                  ..VSHLQTEIGEQREALREMRDIFDAYAETFESD...
A0A238YGD8_HALVU/64-94               ..VNRLNAEIAEQQDAFAETAVAFEEYRESFH--q..
A0A518S828_9EURY/112-143             .i-GELLAAIEALRTEMNTTHETFDAYTEDFAAD...
U1QHG7_9EURY/3-34                    ..VNKKREEIAQAREQFTEKQAEFASYAARFDAD...
M1Y0G8_NATM8/111-142                 ..VSDLLDAVEAFRNEIAATESAFDDYESEFASD...
GVPC1_HALSA/150-181                  ..ISDLVAAIDDFQEEFIAVQDAFDNYAGDFDAE...
A0A554NBM7_9EURY/150-181             ..ISDLIAAIDDLREEFIAVYDAFDDYAADFDAE...
A0A238YGD8_HALVU/162-192             ..VGALLAAVDELRARFANVTAAFDQYAEDFE--q..
GVPC1_HALSA/74-105                   ..VDHLRADIDAQRDVIREMQDAFEAYADIFATD...
A0A238YGD8_HALVU/257-282             .g------EVDDTRASFEDTTAAFEEYRDKFHR-...
A0A554NBM7_9EURY/3-34                ..VTDKRDEMRTAREEFAEAQSELESYADEFAAD...
V4ZT84_9ARCH/81-111                  ..VGALHEEMAATHDAFAAALEEFDAYAGRFD--q..
A0A554NBM7_9EURY/42-73               ..VDNFVDVIGDFQAEMTSTTDAFHTYNDEFATE...
A0A518S828_9EURY/182-213             ..INQFHAATADQRESFDATADAFEEYREEFHG-e..
A0A238YGD8_HALVU/285-315             ..VQAVLAAIDELENDIEATRAEFAATEDDFHE-...
U1QHG7_9EURY/112-141                 .d--ELQAAVEALAAEMKATTGSFEAYADEFTA-...
GVPC1_HALSA/215-246                  ..VEALLEAINDFQQDIGDFRAEFETTEDAFVAF...
A0A554NBM7_9EURY/74-105              ..VDRLRTDIDAQRDVIRELQDAFRAYADTFATD...
U1PA83_9EURY/41-72                   ..VSELRGEIDAVRQQMDEAAAGFSSYNEQFATE...
A0A518S828_9EURY/150-181             ..ISDLVAAINDLREEFIAVHDAFDDYAADFDAE...
GVPC2_HALSA/170-200                  ..VPALTADIAATRADFDDTAASFAAYARAFY--g..
E4NUS1_HALBP/207-238                 ..VQAMLNAIADFQQEIDDFRAEFETTEESFDAF...
M1Y0G8_NATM8/181-211                 ..VDSFHESVAEQREAFAAASDAFSEYREEFNE-...
V4ZT84_9ARCH/3-34                    ..VKDKHDAFAETREQFARAQDGFDQYADGF---wsd
GVPC1_HALSA/3-34                     ..VTDKRDEMSTARDKFAESQQEFESYADEFAAD...
A0A554NBM7_9EURY/215-246             ..VGSLVKAIDDFQQEISDFRAEFETTEDAFATF...
GVPC2_HALSA/104-134                  ..VSALHRDIEALREEFRAVTTDFEDYTTD----efa
Q18JA2_HALWD/111-142                 ..VNHLLMAIEEFQTAITETGAEFDAYAEAFDAD...
Q18JA2_HALWD/149-180                 ..IDDLLTAIDSVEDAFDDVEEAFDAYSTAFAVD...
A0A518S828_9EURY/215-246             ..VEALLEAIDDFQQEIGDFRAEFEATEDAFAAF...
E4NUS1_HALBP/41-72                   ..VSSLLDAIDALRAEIEETGDAFDAYNQEFAAE...
A0A518S828_9EURY/42-73               ..INNLVDEIGDFQAEMTSTTDAFHTYSDEFAAE...
GVPC2_HALSA/35-64                    ..VNSIRTD-SRHRENIRDMRAAVDAYCESFAT-...
A0A238YGD8_HALVU/97-127              ..VQALLTAIGELQQQFVEVEDVFDQYAGDF---ge.
U1QHG7_9EURY/149-172                 ..VSELVAAIEQLRTEMTATADAFD---------x..
#=GC seq_cons                        ..VssLhssIssh+pphssspssF-sYs-cFss....
//