GenomeNet

Database: Pfam
Entry: HcgC
LinkDB: HcgC
Original site: HcgC 
#=GF ID   HcgC
#=GF AC   PF06690.15
#=GF DE   FeGP cofactor biosynthesis protein, methyltransferase HcgC
#=GF PI   DUF1188;
#=GF AU   Moxon SJ;0000-0003-4644-1816
#=GF SE   Pfam-B_22902 (release 10.0)
#=GF GA   31.40 31.40;
#=GF TC   31.40 78.70;
#=GF NC   31.30 30.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF CL   CL0063
#=GF RC   Paper describing PDB structure 5d4t
#=GF RN   [1]
#=GF RM   27391308
#=GF RT   Identification of HcgC as a SAM-Dependent Pyridinol
#=GF RT   Methyltransferase in [Fe]-Hydrogenase Cofactor Biosynthesis.
#=GF RA   Fujishiro T, Bai L, Xu T, Xie X, Schick M, Kahnt J, Rother M, Hu
#=GF RA   X, Ermler U, Shima S;
#=GF RL   Angew Chem Int Ed Engl. 2016;55:9648-9651.
#=GF RC   Paper describing PDB structure 5o4h
#=GF RN   [2]
#=GF RM   28682478
#=GF RT   A Water-Bridged H-Bonding Network Contributes to the Catalysis
#=GF RT   of the SAM-Dependent C-Methyltransferase HcgC.
#=GF RA   Bai L, Wagner T, Xu T, Hu X, Ermler U, Shima S;
#=GF RL   Angew Chem Int Ed Engl. 2017;56:10806-10809.
#=GF DR   INTERPRO; IPR009573;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   The iron guanylylpyridinol (FeGP) cofactor biosynthesis enzymes
#=GF CC   are encoded in a cluster of at least seven conserved genes
#=GF CC   (hcgA-G). This family represents the (SAM)-dependent
#=GF CC   methyltransferase HgcC [1,2], which covalently attaches the
#=GF CC   methyl group at the 3-position of the pyridinol ring. It is
#=GF CC   predominantly found as a monomer in solution, composed of a
#=GF CC   Rossmann-like coenzyme-binding-domain consisting of six parallel
#=GF CC   and one peripheral antiparallel strand flanked by six
#=GF CC   alpha-helices and a smaller alpha/beta domain [1].
#=GF SQ   22
#=GS E1RJE1_METP4/7-256        AC E1RJE1.1
#=GS L0HDP5_METFS/8-257        AC L0HDP5.1
#=GS R9SII2_9EURY/4-260        AC R9SII2.1
#=GS Q6LX54_METMP/2-257        AC Q6LX54.1
#=GS D7DUD4_METV3/2-259        AC D7DUD4.1
#=GS Y489_METJA/7-265          AC Q57913.1
#=GS A0A2U1S5Q1_9EURY/7-267    AC A0A2U1S5Q1.1
#=GS F0S2B9_DESTD/160-394      AC F0S2B9.1
#=GS A0A328PA88_9EURY/4-248    AC A0A328PA88.1
#=GS D3E198_METRM/1-142        AC D3E198.1
#=GS A0A1D2WD36_9EURY/4-250    AC A0A1D2WD36.1
#=GS D3E197_METRM/7-135        AC D3E197.1
#=GS E3GZ37_METFV/7-250        AC E3GZ37.1
#=GS A6UWJ4_META3/2-257        AC A6UWJ4.1
#=GS Q7LYQ0_METTH/5-250        AC Q7LYQ0.1
#=GS A2SU95_METLZ/3-251        AC A2SU95.1
#=GS F6BF28_METIK/2-256        AC F6BF28.1
#=GS A0A315XKK7_9EURY/4-260    AC A0A315XKK7.1
#=GS Q2FPY2_METHJ/6-122        AC Q2FPY2.1
#=GS F1SVM5_METKA/5-249        AC F1SVM5.1
#=GS A0A1R1MJH3_9BACT/160-387  AC A0A1R1MJH3.1
#=GS A0A8J7YG72_9EURY/2-257    AC A0A8J7YG72.1
E1RJE1_METP4/7-256                   ............EYGITRTVRTFFSKYTICNIVDGITEKKSDALLRWMN....ENGI.CPENVLVIGAYLTGAGLSKALSKK..SEVTVLDINSEIKNLLDPD..................VTFSCNIDEA..vSRNYDMIIDTSGFGGIDPD..K..LQMLNSpEVFIVENPCSEGSDNFLNRFNRSVQLLR.SSKAENKGILWT..SGLNSKTSGTMTLTIDTLRRSMNDANKINGVLYSTTNMEFFERILFKEKNPDKFLKTL.DKKALAVSSLI.....ETD.CDEIIDSNLKKINSTI...
L0HDP5_METFS/8-257                   ............EYGITHAVRTCTSRVMLAHVMNSVISTKARAVAAWLA....DRGR.EPRNALIIGTYLTGAGIANRLIGK..CPVTVLDVHPHLNCLLHPG..................VSFTTSLEEV..tGRTWDFVMDTSGIGGISPE..D..IHRLPRcRTFVTEDPASDGSDTMIRQVRQCWERAG.SIRADEKGILHT..SGLAAKTSGTMTLSMGVLRHAMAAAHRQEGVLYCTAPMEFSERILFGDRDPARFFESL.ERPALTVSSLT.....DVD.CDALVWGTLERLKSYV...
R9SII2_9EURY/4-260                   ............DTGITTEVYTIKSKTRLIDIFDEIISKKSSVTLDYVN....SLDLdRDSNIIVVGTYFTGLGIVKKLSRY.yNNITLIDIYPHLEELLHADigge..........lycdVEFSSNLDLI...-YAADVLIDTTGFGGLTVK..Q..SSKLNL.KGFIIEDPVAEDNDELLKDKNNIHKRLE.VVNSPNKAIIKT..KGINTKTSGTMTLTIGVLTDVLNKAQNMDGVLYSACEMTFYEEIIFKERNIEKFMNLA.LRQALKISTIN.....PFD.CDKLLKDELDKIHSEI...
Q6LX54_METMP/2-257                   ............NYGITESVKTTRSKIKIKDIVSDVVEKKANAIKYFLE....GEEF.--KQAIVFGAYLSGSYIAYSLLKD.cEEVIIVDIQPHLKDILFNDgik...........fmdlNKLQLELRNG..tSINPDLVIDLTGIGGVSPD..L..ISKFNP.KVLIVEDPKGN-HDKGISKIDNTDKRLC.--VGAKKGVLKTyrSSKFSKTSGTMTLVVDIIMDSCREINELDSVLYTIPNLKYFEGTVFHEKNVKKFLTEL.NMSAITVSSIDh...vEYE.LEEILSKNISRVDSFV...
D7DUD4_METV3/2-259                   ............KYGITENVKTIESKVKVRDIIKKIAEKKANAIKYYLE....GEEF.--EQAIIFGAYLSGNYIANTLKAD.cGEVILIDSQPHLEDIVTGNgik...........fmdlNTFMLKLRNNkdkEINPDLIIDVTGLGGVDPN..M..LKDFDP.KVLIIEDPKSS-FDKELMEADNTHKRLC.--VGHKKGSLKTfrSSKISKTSGTMTLTVDVIMDSCIEIKELDGVLYSVPNLEYFEGIVFHEKDVRKFLREV.NTPALTVSCLGn...lEAE.IDEIIDKNMQKVYSFV...
Y489_METJA/7-265                     ............KYGITEMVKTIDTKTRVVDVTNEIAKKKYQAIRDFLE....GEEF.--KEVVIFGVYLWGNYTAQMLSKY.aDKVYLVDIHEFMKGFVPNNnsik..........flnlNEFKLKFIRG...EVNPDLIVDLTGLGGIEPE..F..LAKFNP.KVFIVEDPKGV-FDVDIYEADNTYKRTApFIEKAKVGVLKTyrKARVSKTSGTMTLTIDTIVDASREITSLDGVLYAIPNLRYYEGILFHENDIHKFLSEI.SQPAITISTLNd...vLDE.AEEILSNNINLIYSFV...
A0A2U1S5Q1_9EURY/7-267               ............DTGITEEVFTIKSQTKLIDIFNSIIDKKSQVSYEWVL....DLDIdKNSKIIVIGTYFTGIGIVKKLAKT.fNDVLLIDIYPHLKEFINVPigdilt......deekdnISFSSDLDLI...-YSGDVVIDTTGFGGITVE..Q..SSKFDV.KGFLIEDPVAEDNDILLKNKNNIYDRIN.AVKSENKAIIKT..HGINTKTSGTMTLTIGVLTNALNKSLKKEGVLYSACEMGFFEEVIFKEKDIAKFIELT.DKQAMKISTIN.....PFD.CDDLLNEEIDKINSKI...
F0S2B9_DESTD/160-394                 ...........h-NGITKRTKTVYSSLTPLKIAEKISEKKSIPLK----....--NI.RGKKLLIVGGYLDGIFFASILKDQ.fEKIHIFDIENSVLKLA-EL..................LGLKSFLPEK...EFVYDVILDLTGFGGAICRdgK..VSNFKG.KMIISE-------------VASGVQEFP.-KNGKPHFLLKL..KKGKANTSGTMTLTVKTVRESAAKIEEIEGVLYAVPQLFFAESLLFNVKSAESFYELM.EIPALTVSCKTetslrTED.IDKKITEVIENFE---fel
A0A328PA88_9EURY/4-248               ............ETGITNTVKSYFSQHTIQDIIETIGKIKTDTLLDWLA....YKKI.KPEKTLIIGAYLTGAMIANKFK-K..YNVTIVDKHPHLKCLIDTK..................VTFKK-PEAI...RGSWDLVVDTTGIGGIKPE..K..L-KIKT.KTFIVESPISDASDTIIKNHDETKKRIK.AVKAPVKGILYT..SGLNTKTSGTMTLTIEVLRRSLEEILKADGVLYASSQLRFYERILFKEKDCEKFKESL.KENAIIASSLK.....KID.CDMPIKGNLRRIKSEI...
D3E198_METRM/1-142                   ............-------------------------------------....----.------------------------..-------------------..................----------...------------MGGIDES..Q..SESIYT.KVFLIEDPIAEDNDDLLKNKNNIYSRIS.LVNSYNKFILKT..EGLNTKTSGTMTLTIDILRQSMNEILSREGVLYCSSEMTFFEEIVFKENDLDKFFELI.GSPVIKVSTIA.....PFD.CEEIIKCFIDKIYSEI...
A0A1D2WD36_9EURY/4-250               ............DTGITSEVLTVTSRMRVEDVIKKITEIKCNATLDWIN....SLNV.NIENSVVVGAYLTGIELSKRLKRI..SNVTVIDIYPHLEKFVENN..................VEFNSDLMKI...-KDADLVVDTTGLGGIRPK..I..AKLIKG.NVFLVEDPVSDGSDDLIHQKNNIINRLR.LSNSQYRGILKT..EGLNSKTSGTMTLTVEVLRKSLEDVLKRSGVLYGIAGMEFYEGALFKEKDVDKFLRLI.KKPALTVSTLE.....PVS.CDEIIENYLKKICSEV...
D3E197_METRM/7-135                   ............DTGISSEVFTVKSNIKLIDIFNLILEKKARAVMDLFDsltnKETIhNESSIIIIGTYFTGIAIAKYLSYNgfKNITIVDIYPHLEGFIDSNlgdpidvnksskgkfkenIEFSSDLGLI...-RSADVVIDTT--------..-..------.----------------------------.------------..----------------------------------------------------------.-----------.....---.----------------...
E3GZ37_METFV/7-250                   ............ENGITPTVKTYYSEYTFHDIIKYIGEVKTKAVIKWLK....EKKL.KPKNCLIIGGYITGSFLANNLN--..TEITLVDIHPQVINLVEKN..................IEFKIGLDGL...RKKWDLIIDTTGIGGI--E..N..LNKFYT.KAFIIEDPRSDGSDKTIRKIGSKKRLID.SINAKYKAFLYT..YGLQSKTSGTMTLTIEVLKNVMNYFFDVEGVLYCMSPFEFYEGMLFKENNFTKFMKKL.KKHALIVSSLR.....PVS.CDKVIEKFIKKIKSKV...
A6UWJ4_META3/2-257                   ............KYGITETVKTINSKIKINDIIYNIVEKKANAIKYFLE....GEEF.--NQAIVFGAYLCGNFVADALTKD.cDEVILVDVHPHLKEIIINEkik...........fmdsSKFNLSLRNG...ELNPDLVVDLTGIGGLSPE..I..ISKLNP.SVLIVENPKGT-FDKDINNIDNSVDRLN.--KGVKRGLLNTfrTSKVSKTSGSMTLVIDTVMDSCNDLKELDGVLYALPNLKYYEGILFHEKDIRKFIDEV.NTPAITVSCLDe..dlENE.INNILLKNIDRIYSYV...
Q7LYQ0_METTH/5-250                   ............ETGITETVKTFFSSLTVGDIVRRISHLKSSAVTGWLD....DARF.EPENALIIGSYFTGAAISGALD--..CRVTVADINPQTRFLLRGD..................VDFREGIHGL...NGDWDLIVDTTGIGGVTPE..E..LSGFTA.GAFIVEDPTSDGSDETIMGYNSTAERLE.AVEADLKASLRT..LGLGAKTSGTMTLTVEVLRRSMADALECRGVLYATATLRFFERILFRERDPQGFLRAL.ESPALTVSSLG.....DIS.CDEILEGNLGMIRSEV...
A2SU95_METLZ/3-251                   ............ETGITSSVITITSTLREYDLANEIAAKKADTVLAWIE....KEHL.SLSNVLIFGLYFTGAALASRLDKK..AKVTVIDIYPHLAELINGR..................IDFFTHISEV..pCRRWSLIIDTTGLGGVDKQ..T..LSSLYC.DALIVEDPCSDASDMCICSASNRREILM.NHSAPKKGLLTT..TGLNTKTSGTMTLTVAAARHAAAEAEKLCGTLYAVSAADFPERILFKERDMLQFQAVM.SQPALRISSLK.....EID.VDAVLRESLSLIRTEI...
F6BF28_METIK/2-256                   ............KYGITERVKTIDTKIKINDIIKHIVEKKAKAIKYFLE....GEEF.--RQTVIFGAYLCGGYIAHSITDY.sEEVILVDIQQHLKEFVFNKnvk...........fmemNQFKLKMRTG...EVNPDLVIDITGIGGISPD..F..LQKFNP.KCLIVEDPKGC-YDEYIYKADNTMERAT.--VGEKIGILKTyrKSRISKTSGTMTLTIDTVMDSAREVLDLDGVLYVIPNLRYYEGIIFHEKNIHKFLDEV.HMPALTISALEd...vEEE.ANKILENNLSRIKSFV...
A0A315XKK7_9EURY/4-260               ............DTGITSEVLTIKSETKLIDIFNRIIDKKSKAVFDYIE....GLNFdENKKIIVIGTYFTGVGIVKRLSEK.yKNILLIDIYPHLEELLHTDlggk..........pitnADFSSDLDLI...-YSGDFVIDTTGFGGINVE..Q..SSKFDV.DTFIIEDPVAEDNDELLAEKNNIHERLD.AVKAKNKAIIKT..KGIDTKTSGTMTLTIGVLTNLMNKFLEKEGVLYCACEMGFFEEVIFKQKDISKFIELT.NVNAIKVSTIN.....PFD.LDELIGEEISKITSE-m..
Q2FPY2_METHJ/6-122                   srsgliykavlh-------------------------------------....----.------------------------..-------------------..................----------...-------------------..-..------.-----------------------ESLFT.AMGTRHKGILRT..FGLGSKTSGTMTLTLEVIRSSMNAALQEEGVLYCSSHLDFFERMIFKENDLDKFFTQL.LRSALIISSLK.....DVD.PDAILKRYLSRILCQI...
F1SVM5_METKA/5-249                   ............EPGITDLTETVRSR-PFWDVVKEIGLAKAEEIAEVVP....----.EGSRILVLGAYLTGIFVAELLSEE..HEITVLDPEPALRKILPPG..................VRFRASRVPP...PGRYDVVIDLTGLGGTNPR..V..LRRLNP.EVLVVENPAGNMNDPRIEEYNDTEERLE.--AGEESYELRLfdAPFEAKTSGTFTLSVRTVREAANRLERHYGVLYAVPGVVNLERWTFRLRRPEEGVERArEKPAVTVSQLT....gSSD.PDEVIGEVLDEILFEI...
A0A1R1MJH3_9BACT/160-387             ...........h-SGITDKTQTFYAPFTVFDVAKRISEMKAEVLKKFTG....----.--DSLLIIGGYLDGIFIAECLKSN.fRQIFLYDKETSVMALSPCD..................K-------PD...RLKFDVIIDLTGFGGIDVK..EglAGKFKA.DIIVSEEPSGL-------------GLLE.-TEKKPDFFL-R..MNYKSKTSGTMTLTVRTVRELSARLEDFKNVLYAVPNLFFAESLLFNVKSSCGFLDVM.EIPAVTVSVRKdg.nfKVDyFEDVLNDILREIQFE-l..
A0A8J7YG72_9EURY/2-257               ...........k-CGITETVKTLESKTKIVDIIYHIVEEKANAVKYFLE....GQEF.--EQVIIFGAYLCGNHMAHTLVKD.aNEVILVDIYPHLKDIITNKkit...........fmdyNTFNLSLRNK...RLNPDLIIDITGIGGISPE..V..ISNFDP.EVLIVENPKYT-YDMDIFEIDNSLERLN.--VGKKRGLLNTfrSSRVSKTSGTMTLTIDTILDSCNEIKELDGVLYVLPNLKYYEGILFHKKDAKEFMGEI.NNPAVLVSSLDd..diYPE.IDNILKRNIDRIKSHV...
#=GC seq_cons                        ............chGITppVpThpSphplhDIhppIscpKupslhtalp....t.ph...cphllhGsYloGhhlAptLppp..pplhllDI.PaLcpll.ss..................spFp.plpth...thshDlllDhTGhGGlssc.....lpphps.cshIlE-Phup..D.hlhphssthcRlp...pupp+ulL+T..puhsoKTSGTMTLTlcslpcuhschhch-GVLYsssshcFaEtllF+E+chcKFhc.l.ppsAlpVSoLp......h-.sDcllppplp+IpSpl...
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