#=GF ID   Herpes_LP
#=GF AC   PF03363.17
#=GF DE   Herpesvirus leader protein
#=GF AU   Mifsud W;0000-0002-9805-6461
#=GF SE   Pfam-B_1664 (release 6.6)
#=GF GA   25.00 25.00;
#=GF TC   25.20 121.70;
#=GF NC   22.60 21.50;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 75585367 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   10590127
#=GF RT   Sequence and functional analysis of EBNA-LP and EBNA2 proteins
#=GF RT   from nonhuman primate lymphocryptoviruses. 
#=GF RA   Peng R, Gordadze AV, Fuentes Panana EM, Wang F, Zong J, Hayward
#=GF RA   GS, Tan J, Ling PD; 
#=GF RL   J Virol 2000;74:379-389.
#=GF RN   [2]
#=GF RM   11024123
#=GF RT   Conserved regions in the Epstein-Barr virus leader protein
#=GF RT   define distinct domains required for nuclear localization and
#=GF RT   transcriptional cooperation with EBNA2. 
#=GF RA   Peng R, Tan J, Ling PD; 
#=GF RL   J Virol 2000;74:9953-9963.
#=GF DR   INTERPRO; IPR005030;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF SQ   16
#=GS Q8UZJ5_9GAMA/131-260  AC Q8UZJ5.1
#=GS EBNA5_EBVB9/265-394   AC Q8AZK7.1
#=GS EBNA5_EBVA8/199-331   AC Q1HVI8.1
#=GS EBNA5_EBVA8/265-394   AC Q1HVI8.1
#=GS EBNA5_EBVB9/199-331   AC Q8AZK7.1
#=GS Q8UZJ5_9GAMA/66-195   AC Q8UZJ5.1
#=GS EBNA5_EBVA8/331-504   AC Q1HVI8.1
#=GS EBNA5_EBVB9/1-133     AC Q8AZK7.1
#=GS EBNA5_EBVB9/331-504   AC Q8AZK7.1
#=GS EBNA5_EBVA8/67-199    AC Q1HVI8.1
#=GS EBNA5_EBVA8/133-265   AC Q1HVI8.1
#=GS Q8UZJ5_9GAMA/196-370  AC Q8UZJ5.1
#=GS EBNA5_EBVB9/67-199    AC Q8AZK7.1
#=GS Q8UZJ5_9GAMA/1-131    AC Q8UZJ5.1
#=GS EBNA5_EBVA8/1-133     AC Q1HVI8.1
#=GS EBNA5_EBVB9/133-265   AC Q8AZK7.1
Q8UZJ5_9GAMA/131-260             .RGDPSEATGPSRPGPPGLGPEGPFGDLLRRRRHNSPTGGDpQGPTRVRRRVFLEEEDGPVSGPPV--RGDPSEATGPSRPGPPGLGPEGPFGDLLRRRRHNSPTGGDpQGPTRVRRRVFLEEEDGPVSGPP---------------------------------.------------v.
EBNA5_EBVB9/265-394              .RGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPS--------------------------------.------------..
EBNA5_EBVA8/199-331              .RGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP------------------------------.------------r.
EBNA5_EBVA8/265-394              .RGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPS--------------------------------.------------..
EBNA5_EBVB9/199-331              .RGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP------------------------------.------------r.
Q8UZJ5_9GAMA/66-195              .RGDPSEATGPSRPGPPGLGPEGPFGDLLRRRRHNSPTGGDpQGPTRVRRRVFLEEEDGPVSGPPV--RGDPSEATGPSRPGPPGLGPEGPFGDLLRRRRHNSPTGGDpQGPTRVRRRVFLEEEDGPVSGPP---------------------------------.------------v.
EBNA5_EBVA8/331-504              .RGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPLRPRPQPPAQSLREWLLRISERFDPHPVAT.RRQSVYIEEEED..
EBNA5_EBVB9/1-133                m-GDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP------------------------------.------------r.
EBNA5_EBVB9/331-504              .RGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPLRPRPRPPARSLREWLLRIRDHFEPPTVTT.QRQSVYIEEEED..
EBNA5_EBVA8/67-199               .RGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP------------------------------.------------r.
EBNA5_EBVA8/133-265              .RGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP------------------------------.------------r.
Q8UZJ5_9GAMA/196-370             .RGDPSEATGPSRPGPPGLGPEGPFGDLLRRRRHNSPTGGDpQGPTRVRRRVFLEEEDGPVSGPPV--RGDPSEATGPSRPGPPGLGPEGPFGDLLRRRRHNSPTGGDpQGPTRVRRRVFLEEEDGPVSGPPVRPQGPLIQPGARSWSEWLARSRQRTNPQQVTTtCRRRVYIEEEEE..
EBNA5_EBVB9/67-199               .RGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP------------------------------.------------r.
Q8UZJ5_9GAMA/1-131               m-GDPSEATGPSRPGPPGLGPEGPFGDLLRRRRHNSPTGGDpQGPTRVRRRVFLEEEDGPVSGPPV--RGDPSEATGPSRPGPPGLGPEGPFGDLLRRRRHNSPTGGDpQGPTRVRRRVFLEEEDGPVSGPP---------------------------------.------------vr
EBNA5_EBVA8/1-133                m-GDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEVPGPARPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP------------------------------.------------r.
EBNA5_EBVB9/133-265              .RGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEGPGPTRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP------------------------------.------------r.
#=GC seq_cons                    .RGDRSEuPGPoRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGPRGDRSEuPGPoRPGPPGIGPEGPLGQLLRRHRSPSPTRGG.QEPRRVRRRVLVQQEEEVVSGSPSGP...........................................h.
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