#=GF ID   Herpes_UL35
#=GF AC   PF04496.16
#=GF DE   Herpesvirus UL35 family 
#=GF PI   UL35; 
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   Pfam-B_3981 (release 7.5)
#=GF GA   25.00 25.00;
#=GF TC   39.60 50.80;
#=GF NC   23.80 21.80;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 75585367 --cpu 4 -E 1000 HMM pfamseq
#=GF TP   Family
#=GF RN   [1]
#=GF RM   1313892
#=GF RT   Identification and characterization of the herpes simplex virus
#=GF RT   type 1 virion protein encoded by the UL35 open reading frame. 
#=GF RA   McNabb DS, Courtney RJ; 
#=GF RL   J Virol 1992;66:2653-2663.
#=GF DR   INTERPRO; IPR007584;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   UL35 represents a true late gene which encodes a 12-kDa  capsid
#=GF CC   protein [1].
#=GF SQ   32
#=GS Q77FP5_9ALPH/15-115      AC Q77FP5.1
#=GS Q805Z3_CHV1/8-105        AC Q805Z3.1
#=GS SCP_HHV11/6-104          AC P10219.1
#=GS A0A109ZR35_9ALPH/33-130  AC A0A109ZR35.1
#=GS E2IUD4_SHV1/4-102        AC E2IUD4.1
#=GS A0A060Q0V9_9ALPH/7-104   AC A0A060Q0V9.1
#=GS A0A173DXH1_FHV1/4-102    AC A0A173DXH1.1
#=GS A0A1S6JLN5_HSVA1/6-102   AC A0A1S6JLN5.1
#=GS K9MFY4_9ALPH/6-104       AC K9MFY4.1
#=GS Q9WSX8_9ALPH/15-114      AC Q9WSX8.1
#=GS Q9DPQ4_MEHV1/50-149      AC Q9DPQ4.1
#=GS A0A068EVY6_9ALPH/18-116  AC A0A068EVY6.1
#=GS A0A077B9B3_9ALPH/18-117  AC A0A077B9B3.1
#=GS A0A1V0M8G9_9ALPH/18-116  AC A0A1V0M8G9.1
#=GS SCP_GAHVM/15-115         AC Q9E6N4.1
#=GS A0A089N3Y4_9ALPH/6-106   AC A0A089N3Y4.1
#=GS SCP_HHV2H/6-104          AC P89458.1
#=GS Q9E1Z3_CHV9D/10-108      AC Q9E1Z3.1
#=GS Q2QBE1_CHV16/8-105       AC Q2QBE1.1
#=GS SCP_VZVD/10-108          AC P09279.1
#=GS A0A1P7U0D2_9ALPH/15-114  AC A0A1P7U0D2.1
#=GS A0A172DSH9_9ALPH/3-101   AC A0A172DSH9.1
#=GS Q77KA6_9ALPH/2-101       AC Q77KA6.1
#=GS SCP_EHV1B/13-114         AC P28974.1
#=GS A0A286MM45_9ALPH/3-103   AC A0A286MM45.1
#=GS J9QQS7_9ALPH/3-100       AC J9QQS7.1
#=GS A0A1L5JKG1_9ALPH/6-106   AC A0A1L5JKG1.1
#=GS Q65554_9ALPH/6-106       AC Q65554.1
#=GS A0A1R3T5E5_9ALPH/6-109   AC A0A1R3T5E5.1
#=GS G9CUE4_9ALPH/15-115      AC G9CUE4.1
#=GS L0N6J9_HHV1/6-104        AC L0N6J9.1
#=GS A2TIV6_9ALPH/12-110      AC A2TIV6.1
Q77FP5_9ALPH/15-115                 ........................TFDPSDLSTYTLDVLHHYPLVDLLQQLNAIPNDLKIPDTYSKVEQAARI.NVLRAI-------CVGFAEVRRHNDNRTLQRSTMFA.VNDAASRIRPSIGLKRTF-PTGIF...
Q805Z3_CHV1/8-105                   .......................f-HLPDTLHPERIQALGLREIVL------A-VNEARPIDHTHDHPLGNR-.---AAARNFIRGQAGALADLCRAHANHTLELQPMFS.REAPGAWLRPAFGLRRTYMPFL--aa.
SCP_HHV11/6-104                     ........................FHRPSTVTTDSVRALGMRGLVL------ATNNSQFIMDNNHPHPQGTQ-.---GAVREFLRGQAAALTDLGLAHANNTFTPQPMFA.GDAPAAWLRPAFGLRRTYSPFVVR...
A0A109ZR35_9ALPH/33-130             ...................fhrpv-----TIKACEV---KKLPLGELITEVNA--APQLTPDHNHP--EGNH-.---VAAREFLRGQASALRQLCRAHSKNTFERQPMFY.GESNNAWLRPTFGLRRTFSPFFV-t..
E2IUD4_SHV1/4-102                   .....................vnf----SHPDSISARAVGAMELRDIIRAVNS----TAPIDAQHPHPRGNA-.---AAAQAYVRGLAGALTQLYNAHANNTLAPQPMFA.SPDPASWLRPTFGLKRTFSPF---tp.
A0A060Q0V9_9ALPH/7-104              ........................FHRPNSVNADDVRAMSLRDLVL------AVNTSRNI-DHNYDHPLGNH-.---TAVRNFVRGQAGALAHLCHQHANNTFATQPMFS.HEAPADWLRPAFGLRRTFSPFVVR...
A0A173DXH1_FHV1/4-102               .......................e-FNPADLQTITAANLNGLLPVDIIQSLNR----------AGRPEGASQA.AMLDAKRTLFVGTALSMVALRQRHAQHTINRLPMFA.EYDGSYWARPTIGLKRTFSPRLI-q..
A0A1S6JLN5_HSVA1/6-102              .....................fgr------PNTISARAVGAMDMRHIIQQVNAAP----PPDQQHEHPRGNA-.---AAAHSYVRGLAGALTALYNAHAHNTLAPQPMFA.APDPASWLRPAFGLKRTFSPF---tp.
K9MFY4_9ALPH/6-104                  ........................FHRPSTITADNVRALGMRGLVL------ATNNAQFIMDNNYPHPHGTQ-.---GAVREFLRGQAAALTDLGLAHANNTFTPQPMFA.GDAPAAWLRPSVGLKRTYSPFVVR...
Q9WSX8_9ALPH/15-114                 .......................a-FDPSDLSTYKLDVLVNYPLSDLVHHLNAIPRNLQVSDRHSDLN-AAKI.NVLRAL-------CVGFSDVRRKNDTRTLQRTPMFA.IGDAASRLRPSIGLKRTF-PTGIF...
Q9DPQ4_MEHV1/50-149                 .......................p-FDASDLGTYTLDILHRYSLVDLVQLLNDLPRNITS-TPASNVETMAKI.NVLRAI-------CVGFAEVRRHNDARTLQRTAMFA.ADDVASRIRPSIGLKRTY-PPGI-f..
A0A068EVY6_9ALPH/18-116             .......................p-FDPVNLDTYRLDLLKEVPLIDLINALNDLPV------HTEFAGQKTQ-.--ADARGIILKAIALGFATMRHRHDTHTLMRTPMFA.MEDGASWARPTIGLKRTFPP----glh
A0A077B9B3_9ALPH/18-117             ........................VFDPSDPTTIRATNFVNIVPADVMAVLNA---------ARPLVEPFDDK.TIDEALRQLFMGTARAMVFLRQGHLGALVGRTPMFA.EDDAAAWARPTIGLKRTFSPRF--tq.
A0A1V0M8G9_9ALPH/18-116             .......................p-FDPVNLDTYRLDLLKEVPLIDLINALNDLPV------HTEFAGQKTQ-.--ADARGIILKAIALGFATMRHRHDTHTLMRTPMFA.MEDGASWARPTIGLKRTFPP----glh
SCP_GAHVM/15-115                    ........................TFDPSDLSTYTLDVLHHYPLVDLLQQLNAIPNDLKIPDTYSKVEQAARI.NVLRAI-------CVGFAEVRRHNDNRTLQRSTMFA.VNDAASRIRPSIGLKRTF-PTGIF...
A0A089N3Y4_9ALPH/6-106              ......................gi--DPSAPATITPDTLRDLLPVQILHVLNA---------AARPLQDGTTPeQVSAARRNLLVGTSLAMVDLRRRHEKAVVPRVPMFA.TYDHAHWARPTIGLKRTFLPRVV-q..
SCP_HHV2H/6-104                     ........................FHRPSTITADNVRALGMRGLVL------ATNNAQFIMDNSYPHPHGTQ-.---GAVREFLRGQAAALTDLGVTHANNTFAPQPMFA.GDAAAEWLRPSFGLKRTYSPFVVR...
Q9E1Z3_CHV9D/10-108                 .......................h-FDPSVPGTFSVDAIAANSPVALLQLVNA----------SGPVISGVRF.DIGHIRSIYTVGAAAAAARSRVNHNVNTIRRTAMFA.ETDAMTWLRPTVGLKRTFNPRIVR...
Q2QBE1_CHV16/8-105                  ........................FHRPDTLHPERIQALGMRELVL------AV-NEAQPVDHTHDHPLGER-.---AAVRNFLRGQAGALADMCRAHANHTLELQPMFG.GEAPGDWLRPAFGLRRTYLPFL--aa.
SCP_VZVD/10-108                     ........................VFDPSNPTTFSVEAIAAYTPVALIRLLNA----------SGPLQPGHRV.DIADARSIYTVGAAASAARARANHNANTIRRTAMFA.ETDPMTWLRPTVGLKRTFNPRIIR...
A0A1P7U0D2_9ALPH/15-114             .......................a-FDPSDLSTYKLDVLVNYPLSDLVHHLNAIPRNLQVSDRHSDLN-AAKI.NVLRAL-------CVGFSDVRRKNDTRTLQRTPMFA.IGDAASRLRPSIGLKRTF-PTGIF...
A0A172DSH9_9ALPH/3-101              sfnpadlktitaanlrgllpaqii---------------------------------TIINQSNHPNN-ASPA.EILDAQRNLLIGTSLSMVALRQRHANHTIARVPMFA.EYDGLFWARPTIGLKRTFSPRL--tq.
Q77KA6_9ALPH/2-101                  .......................s-FDPNNPRTITAQTLEGALPVDILLRLNR--ATGLQMDAAE----AHA-.IVEDARRTLFIGTSLALVNLRHAHDKHLVERQPMFA.TSDYSSWARPTVGLKRTFCPR---p..
SCP_EHV1B/13-114                    .......................a-FNPADPPNIKAANFKDMLPVDVITILNQ--N----IDELDYTKYTED-.EISEGLKQLFMGTARTMVSLRQRHLKSLVRRSDMFA.QNDASTWARPNIGLKRTFPPRF--mq.
A0A286MM45_9ALPH/3-103              .......................s-FNVADPRSFTPDSMDQRTPEEILRALNR---GNAAPD-WRRVPQAEA-.--LEARRALLIGISLGMVTLRHRHEKNTLPREEMFA.VRDPAEWARVTIGLKRTFSPR---tt.
J9QQS7_9ALPH/3-100                  ......................fs--RPDSITADGVRQLSLRDIVL------A-VNDARRMDRKHDHPQGNN-.---AALVHFLRGQAMALRQLYETGADGTLAVQPMFY.GEQHGRWLRPAFGLKRTYSPFIVR...
A0A1L5JKG1_9ALPH/6-106              ......................gi--DPSAPATITPDTLRDLLPVQILHVLNA---------ASRPLQDGTTPeQVSAARRNLLVGTSLAMVDLRRRHEKAVVPRVPMFA.TYDHAHWARPTIGLKRTFLPRVV-q..
Q65554_9ALPH/6-106                  ......................gi--DPSAPATITPDTLRDLLPVQILHVLNA---------AARPLQDGTTPeQVSAARRNLLVGTSLAMVDLRRRHEKAVVPRVPMFA.TYDHAHWARPTIGLKRTFLPRVV-q..
A0A1R3T5E5_9ALPH/6-109              .......................a-FDASNPDTYTPQAVQKLKSVDIIQVLNQ------IKPCTNPFAKIPRK.RLDEARRDLVLCLAVGLANTRRQHDDNVLARTQMFAcESDGASDMRPSVGLKRTFLPRLV-q..
G9CUE4_9ALPH/15-115                 ........................TFDPSDLSTYTLDVLHHYPLVDLLQQLNAIPNDLKIPDTYSKVEQAARI.NVLRAI-------CVGFAEVRRHNDNRTLQRSTMFA.VNDAASRIRPSIGLKRTF-PTGIF...
L0N6J9_HHV1/6-104                   ........................FHRPSTVTTDSVRALGMRGLVL------ATNNSQFIMDNNHPHPQGTQ-.---GAVREFLRGQAAALTDLGLAHANNTFTPQPMFA.GDAPAAWLRPAFGLRRTYSPFVVR...
A2TIV6_9ALPH/12-110                 ........................TFDPRRPETYTYEALSAVPFFALLMELNSVSGHANVRQN---TVSAARL.ALIRAL-------SAGLTTIRRANDDATLSRYPMFG.RTDGASWVRPSFGLKRTFSPRIIR...
#=GC seq_cons                       .........................acPus.sThsscsLtthshVpllp.lNA........spspsh.pusp.....sAhpthhhG.usuhsslRcpHsspTltRpPMFA.tpDsAsWlRPolGLKRTFsPhhl....
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